A new tool for formalised vegetation reconstruction from (sub)fossil records – the FEVER Index
Plant macro-remains provide valuable environmental information of the past, but reconstruction of past vegetation is challenging, because a macrofossil sample may include material from various habitats and also because its species composition is biased and incomplete. Therefore, we aimed to propose,...
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creator | Pokorná, Adéla Hájková, Petra Bernardová, Alex Jonášová, Barbora Kučerová, Andrea Jiroušková, Jana Šumberová, Kateřina Šolcová, Anna Starec, Petr Tichý, Lubomír |
description | Plant macro-remains provide valuable environmental information of the past, but reconstruction of past vegetation is challenging, because a macrofossil sample may include material from various habitats and also because its species composition is biased and incomplete. Therefore, we aimed to propose, test and evaluate an objective tool for data reconstruction in archaeobotany and palaeoecology. Our
Fossil assEmblage VEgetation Reconstruction Index
(FEVER Index) indicates relative probabilities that particular taxa in a fossil assemblage come from respective vegetation types. In contrast to the
Frequency Positive Fidelity Index (FPFI)
used for modern vegetation classification, the FEVER Index emphasises the importance of diagnostic species. The comparison between the FEVER and FPFI indices, when they are applied to a large dataset of modern vegetation plots, has shown that the FEVER Index has greater classification accuracy. In the case where taxonomic data were reduced to genera only, the efficiency of the FEVER Index was even higher than FPFI. This shows that the FEVER Index is more accurate when applied to incomplete fossil data, but only when there are some diagnostic species still present. We also examined the similarity between modern vegetation and corresponding seed bank data. Wetland habitats, such as calcareous fens and periodically exposed riverbeds showed high similarity between the vegetation and the seed banks because of the local origin of the seed bank material. Lower similarity was, however, detected in the case of small pools in the upper reaches of the river Lužnice, the seed bank of which included not only aquatic vegetation but also plants from terrestrial habitats nearby, transported by flowing water. Finally, we provide two examples of applying the FEVER Index to fossil data. |
doi_str_mv | 10.1007/s00334-024-00996-8 |
format | Article |
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Fossil assEmblage VEgetation Reconstruction Index
(FEVER Index) indicates relative probabilities that particular taxa in a fossil assemblage come from respective vegetation types. In contrast to the
Frequency Positive Fidelity Index (FPFI)
used for modern vegetation classification, the FEVER Index emphasises the importance of diagnostic species. The comparison between the FEVER and FPFI indices, when they are applied to a large dataset of modern vegetation plots, has shown that the FEVER Index has greater classification accuracy. In the case where taxonomic data were reduced to genera only, the efficiency of the FEVER Index was even higher than FPFI. This shows that the FEVER Index is more accurate when applied to incomplete fossil data, but only when there are some diagnostic species still present. We also examined the similarity between modern vegetation and corresponding seed bank data. Wetland habitats, such as calcareous fens and periodically exposed riverbeds showed high similarity between the vegetation and the seed banks because of the local origin of the seed bank material. Lower similarity was, however, detected in the case of small pools in the upper reaches of the river Lužnice, the seed bank of which included not only aquatic vegetation but also plants from terrestrial habitats nearby, transported by flowing water. Finally, we provide two examples of applying the FEVER Index to fossil data.</description><identifier>ISSN: 0939-6314</identifier><identifier>EISSN: 1617-6278</identifier><identifier>DOI: 10.1007/s00334-024-00996-8</identifier><language>eng</language><publisher>Berlin/Heidelberg: Springer Berlin Heidelberg</publisher><subject>Anthropology ; Aquatic habitats ; Aquatic plants ; Archaeology ; Biogeosciences ; Classification ; Climate Change ; Earth and Environmental Science ; Earth Sciences ; Environmental information ; Fever ; Fossils ; Genera ; Habitats ; New records ; Original Article ; Paleoecology ; Paleontology ; Plant fossils ; Plant layout ; Plants ; Plants (botany) ; Reconstruction ; River beds ; Seed banks ; Seeds ; Similarity ; Species composition ; Vegetation</subject><ispartof>Vegetation history and archaeobotany, 2024-11, Vol.33 (6), p.725-739</ispartof><rights>The Author(s), under exclusive licence to Springer-Verlag GmbH Germany, part of Springer Nature 2024. Springer Nature or its licensor (e.g. a society or other partner) holds exclusive rights to this article under a publishing agreement with the author(s) or other rightsholder(s); author self-archiving of the accepted manuscript version of this article is solely governed by the terms of such publishing agreement and applicable law.</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><cites>FETCH-LOGICAL-c270t-170c7da279308f0498eb096ef3e9da6f9f3613ebf6083348a695709f8b903d663</cites><orcidid>0000-0001-5916-0381</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://link.springer.com/content/pdf/10.1007/s00334-024-00996-8$$EPDF$$P50$$Gspringer$$H</linktopdf><linktohtml>$$Uhttps://link.springer.com/10.1007/s00334-024-00996-8$$EHTML$$P50$$Gspringer$$H</linktohtml><link.rule.ids>314,780,784,27923,27924,41487,42556,51318</link.rule.ids></links><search><creatorcontrib>Pokorná, Adéla</creatorcontrib><creatorcontrib>Hájková, Petra</creatorcontrib><creatorcontrib>Bernardová, Alex</creatorcontrib><creatorcontrib>Jonášová, Barbora</creatorcontrib><creatorcontrib>Kučerová, Andrea</creatorcontrib><creatorcontrib>Jiroušková, Jana</creatorcontrib><creatorcontrib>Šumberová, Kateřina</creatorcontrib><creatorcontrib>Šolcová, Anna</creatorcontrib><creatorcontrib>Starec, Petr</creatorcontrib><creatorcontrib>Tichý, Lubomír</creatorcontrib><title>A new tool for formalised vegetation reconstruction from (sub)fossil records – the FEVER Index</title><title>Vegetation history and archaeobotany</title><addtitle>Veget Hist Archaeobot</addtitle><description>Plant macro-remains provide valuable environmental information of the past, but reconstruction of past vegetation is challenging, because a macrofossil sample may include material from various habitats and also because its species composition is biased and incomplete. Therefore, we aimed to propose, test and evaluate an objective tool for data reconstruction in archaeobotany and palaeoecology. Our
Fossil assEmblage VEgetation Reconstruction Index
(FEVER Index) indicates relative probabilities that particular taxa in a fossil assemblage come from respective vegetation types. In contrast to the
Frequency Positive Fidelity Index (FPFI)
used for modern vegetation classification, the FEVER Index emphasises the importance of diagnostic species. The comparison between the FEVER and FPFI indices, when they are applied to a large dataset of modern vegetation plots, has shown that the FEVER Index has greater classification accuracy. In the case where taxonomic data were reduced to genera only, the efficiency of the FEVER Index was even higher than FPFI. This shows that the FEVER Index is more accurate when applied to incomplete fossil data, but only when there are some diagnostic species still present. We also examined the similarity between modern vegetation and corresponding seed bank data. Wetland habitats, such as calcareous fens and periodically exposed riverbeds showed high similarity between the vegetation and the seed banks because of the local origin of the seed bank material. Lower similarity was, however, detected in the case of small pools in the upper reaches of the river Lužnice, the seed bank of which included not only aquatic vegetation but also plants from terrestrial habitats nearby, transported by flowing water. Finally, we provide two examples of applying the FEVER Index to fossil data.</description><subject>Anthropology</subject><subject>Aquatic habitats</subject><subject>Aquatic plants</subject><subject>Archaeology</subject><subject>Biogeosciences</subject><subject>Classification</subject><subject>Climate Change</subject><subject>Earth and Environmental Science</subject><subject>Earth Sciences</subject><subject>Environmental information</subject><subject>Fever</subject><subject>Fossils</subject><subject>Genera</subject><subject>Habitats</subject><subject>New records</subject><subject>Original Article</subject><subject>Paleoecology</subject><subject>Paleontology</subject><subject>Plant fossils</subject><subject>Plant layout</subject><subject>Plants</subject><subject>Plants (botany)</subject><subject>Reconstruction</subject><subject>River beds</subject><subject>Seed banks</subject><subject>Seeds</subject><subject>Similarity</subject><subject>Species composition</subject><subject>Vegetation</subject><issn>0939-6314</issn><issn>1617-6278</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2024</creationdate><recordtype>article</recordtype><recordid>eNp9UMtOwzAQtBBIlMIPcLLEBQ6GdZz6cayqFipVQkLA1eRhl1RpXOyEx41_4A_5EtwGiRuH0Wq1M7O7g9AphUsKIK4CAGMpgSQClOJE7qEB5VQQngi5jwagmCKc0fQQHYWwAqBCjGCAnsa4MW-4da7G1vkt1lldBVPiV7M0bdZWrsHeFK4Jre-KXWu9W-Pz0OUX1oVQ1bu5LwP-_vzC7bPBs-nj9A7Pm9K8H6MDm9XBnPzWIXqYTe8nN2Rxez2fjBekSAS0hAooRJklQjGQFlIlTQ6KG8uMKjNulWWcMpNbDjJ-KjOuRgKUlbkCVnLOhuis991499KZ0OqV63wTV2pGqaQ0TVkaWUnPKny83BurN75aZ_5DU9DbJHWfpI5J6l2SWkYR60Uhkpul8X_W_6h-AIdZdm8</recordid><startdate>20241101</startdate><enddate>20241101</enddate><creator>Pokorná, Adéla</creator><creator>Hájková, Petra</creator><creator>Bernardová, Alex</creator><creator>Jonášová, Barbora</creator><creator>Kučerová, Andrea</creator><creator>Jiroušková, Jana</creator><creator>Šumberová, Kateřina</creator><creator>Šolcová, Anna</creator><creator>Starec, Petr</creator><creator>Tichý, Lubomír</creator><general>Springer Berlin Heidelberg</general><general>Springer Nature B.V</general><scope>AAYXX</scope><scope>CITATION</scope><orcidid>https://orcid.org/0000-0001-5916-0381</orcidid></search><sort><creationdate>20241101</creationdate><title>A new tool for formalised vegetation reconstruction from (sub)fossil records – the FEVER Index</title><author>Pokorná, Adéla ; Hájková, Petra ; Bernardová, Alex ; Jonášová, Barbora ; Kučerová, Andrea ; Jiroušková, Jana ; Šumberová, Kateřina ; Šolcová, Anna ; Starec, Petr ; Tichý, Lubomír</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c270t-170c7da279308f0498eb096ef3e9da6f9f3613ebf6083348a695709f8b903d663</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2024</creationdate><topic>Anthropology</topic><topic>Aquatic habitats</topic><topic>Aquatic plants</topic><topic>Archaeology</topic><topic>Biogeosciences</topic><topic>Classification</topic><topic>Climate Change</topic><topic>Earth and Environmental Science</topic><topic>Earth Sciences</topic><topic>Environmental information</topic><topic>Fever</topic><topic>Fossils</topic><topic>Genera</topic><topic>Habitats</topic><topic>New records</topic><topic>Original Article</topic><topic>Paleoecology</topic><topic>Paleontology</topic><topic>Plant fossils</topic><topic>Plant layout</topic><topic>Plants</topic><topic>Plants (botany)</topic><topic>Reconstruction</topic><topic>River beds</topic><topic>Seed banks</topic><topic>Seeds</topic><topic>Similarity</topic><topic>Species composition</topic><topic>Vegetation</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Pokorná, Adéla</creatorcontrib><creatorcontrib>Hájková, Petra</creatorcontrib><creatorcontrib>Bernardová, Alex</creatorcontrib><creatorcontrib>Jonášová, Barbora</creatorcontrib><creatorcontrib>Kučerová, Andrea</creatorcontrib><creatorcontrib>Jiroušková, Jana</creatorcontrib><creatorcontrib>Šumberová, Kateřina</creatorcontrib><creatorcontrib>Šolcová, Anna</creatorcontrib><creatorcontrib>Starec, Petr</creatorcontrib><creatorcontrib>Tichý, Lubomír</creatorcontrib><collection>CrossRef</collection><jtitle>Vegetation history and archaeobotany</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Pokorná, Adéla</au><au>Hájková, Petra</au><au>Bernardová, Alex</au><au>Jonášová, Barbora</au><au>Kučerová, Andrea</au><au>Jiroušková, Jana</au><au>Šumberová, Kateřina</au><au>Šolcová, Anna</au><au>Starec, Petr</au><au>Tichý, Lubomír</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>A new tool for formalised vegetation reconstruction from (sub)fossil records – the FEVER Index</atitle><jtitle>Vegetation history and archaeobotany</jtitle><stitle>Veget Hist Archaeobot</stitle><date>2024-11-01</date><risdate>2024</risdate><volume>33</volume><issue>6</issue><spage>725</spage><epage>739</epage><pages>725-739</pages><issn>0939-6314</issn><eissn>1617-6278</eissn><abstract>Plant macro-remains provide valuable environmental information of the past, but reconstruction of past vegetation is challenging, because a macrofossil sample may include material from various habitats and also because its species composition is biased and incomplete. Therefore, we aimed to propose, test and evaluate an objective tool for data reconstruction in archaeobotany and palaeoecology. Our
Fossil assEmblage VEgetation Reconstruction Index
(FEVER Index) indicates relative probabilities that particular taxa in a fossil assemblage come from respective vegetation types. In contrast to the
Frequency Positive Fidelity Index (FPFI)
used for modern vegetation classification, the FEVER Index emphasises the importance of diagnostic species. The comparison between the FEVER and FPFI indices, when they are applied to a large dataset of modern vegetation plots, has shown that the FEVER Index has greater classification accuracy. In the case where taxonomic data were reduced to genera only, the efficiency of the FEVER Index was even higher than FPFI. This shows that the FEVER Index is more accurate when applied to incomplete fossil data, but only when there are some diagnostic species still present. We also examined the similarity between modern vegetation and corresponding seed bank data. Wetland habitats, such as calcareous fens and periodically exposed riverbeds showed high similarity between the vegetation and the seed banks because of the local origin of the seed bank material. Lower similarity was, however, detected in the case of small pools in the upper reaches of the river Lužnice, the seed bank of which included not only aquatic vegetation but also plants from terrestrial habitats nearby, transported by flowing water. Finally, we provide two examples of applying the FEVER Index to fossil data.</abstract><cop>Berlin/Heidelberg</cop><pub>Springer Berlin Heidelberg</pub><doi>10.1007/s00334-024-00996-8</doi><tpages>15</tpages><orcidid>https://orcid.org/0000-0001-5916-0381</orcidid></addata></record> |
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subjects | Anthropology Aquatic habitats Aquatic plants Archaeology Biogeosciences Classification Climate Change Earth and Environmental Science Earth Sciences Environmental information Fever Fossils Genera Habitats New records Original Article Paleoecology Paleontology Plant fossils Plant layout Plants Plants (botany) Reconstruction River beds Seed banks Seeds Similarity Species composition Vegetation |
title | A new tool for formalised vegetation reconstruction from (sub)fossil records – the FEVER Index |
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