The genomes of two Australian isolates of Verticillium dahliae recovered from cotton fields
Verticillium wilt is a major disease in a wide variety of crops and is caused by the fungus Verticillium dahliae Kleb. In Australian cotton growing regions two pathotypes of V. dahliae are described, namely non-defoliating and defoliating, classified on their ability to cause defoliation in cotton (...
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| Veröffentlicht in: | Australasian plant pathology 2024-09, Vol.53 (5), p.435-441 |
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| creator | Gardiner, Donald M. Smith, Linda J. Rusu, Anca Aitken, Elizabeth A. B. |
| description | Verticillium wilt is a major disease in a wide variety of crops and is caused by the fungus
Verticillium dahliae Kleb.
In Australian cotton growing regions two pathotypes of
V. dahliae
are described, namely non-defoliating and defoliating, classified on their ability to cause defoliation in cotton (
Gossypium hirsutum
) as well as okra (
Abelmoschus esculentus)
and olives (
Olea europaea
). Herein we report the genomes of two isolates of
V. dahliae
, one predicted to be non-defoliating and the other predicted to be defoliating. Phylogenomic analysis places each isolate into separate clades, but the highly aggressive, predicted defoliating, strain lacks the genomic features reported as important for causing defoliation on cotton in other regions. |
| doi_str_mv | 10.1007/s13313-024-00993-5 |
| format | Article |
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Verticillium dahliae Kleb.
In Australian cotton growing regions two pathotypes of
V. dahliae
are described, namely non-defoliating and defoliating, classified on their ability to cause defoliation in cotton (
Gossypium hirsutum
) as well as okra (
Abelmoschus esculentus)
and olives (
Olea europaea
). Herein we report the genomes of two isolates of
V. dahliae
, one predicted to be non-defoliating and the other predicted to be defoliating. Phylogenomic analysis places each isolate into separate clades, but the highly aggressive, predicted defoliating, strain lacks the genomic features reported as important for causing defoliation on cotton in other regions.</description><identifier>ISSN: 0815-3191</identifier><identifier>EISSN: 1448-6032</identifier><identifier>DOI: 10.1007/s13313-024-00993-5</identifier><language>eng</language><publisher>Dordrecht: Springer Netherlands</publisher><subject>Abelmoschus esculentus ; Agriculture ; Biomedical and Life Sciences ; Cotton ; Defoliation ; Ecology ; Entomology ; fungi ; genome ; Genomes ; Genomic analysis ; genomics ; Gossypium hirsutum ; Life Sciences ; Okra ; Olea europaea ; Olives ; Original Research Article ; pathotypes ; Plant Pathology ; Plant Sciences ; Verticillium dahliae ; Verticillium wilt</subject><ispartof>Australasian plant pathology, 2024-09, Vol.53 (5), p.435-441</ispartof><rights>The Author(s) 2024</rights><rights>The Author(s) 2024. This work is published under http://creativecommons.org/licenses/by/4.0/ (the “License”). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License.</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><cites>FETCH-LOGICAL-c277t-7adca1cb4515a3d64e64baacd9aad15874a480e62f16e54fb37332c05da8a2a23</cites><orcidid>0000-0002-2162-8716</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://link.springer.com/content/pdf/10.1007/s13313-024-00993-5$$EPDF$$P50$$Gspringer$$Hfree_for_read</linktopdf><linktohtml>$$Uhttps://link.springer.com/10.1007/s13313-024-00993-5$$EHTML$$P50$$Gspringer$$Hfree_for_read</linktohtml><link.rule.ids>314,776,780,27901,27902,41464,42533,51294</link.rule.ids></links><search><creatorcontrib>Gardiner, Donald M.</creatorcontrib><creatorcontrib>Smith, Linda J.</creatorcontrib><creatorcontrib>Rusu, Anca</creatorcontrib><creatorcontrib>Aitken, Elizabeth A. B.</creatorcontrib><title>The genomes of two Australian isolates of Verticillium dahliae recovered from cotton fields</title><title>Australasian plant pathology</title><addtitle>Australasian Plant Pathol</addtitle><description>Verticillium wilt is a major disease in a wide variety of crops and is caused by the fungus
Verticillium dahliae Kleb.
In Australian cotton growing regions two pathotypes of
V. dahliae
are described, namely non-defoliating and defoliating, classified on their ability to cause defoliation in cotton (
Gossypium hirsutum
) as well as okra (
Abelmoschus esculentus)
and olives (
Olea europaea
). Herein we report the genomes of two isolates of
V. dahliae
, one predicted to be non-defoliating and the other predicted to be defoliating. Phylogenomic analysis places each isolate into separate clades, but the highly aggressive, predicted defoliating, strain lacks the genomic features reported as important for causing defoliation on cotton in other regions.</description><subject>Abelmoschus esculentus</subject><subject>Agriculture</subject><subject>Biomedical and Life Sciences</subject><subject>Cotton</subject><subject>Defoliation</subject><subject>Ecology</subject><subject>Entomology</subject><subject>fungi</subject><subject>genome</subject><subject>Genomes</subject><subject>Genomic analysis</subject><subject>genomics</subject><subject>Gossypium hirsutum</subject><subject>Life Sciences</subject><subject>Okra</subject><subject>Olea europaea</subject><subject>Olives</subject><subject>Original Research Article</subject><subject>pathotypes</subject><subject>Plant Pathology</subject><subject>Plant Sciences</subject><subject>Verticillium dahliae</subject><subject>Verticillium wilt</subject><issn>0815-3191</issn><issn>1448-6032</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2024</creationdate><recordtype>article</recordtype><sourceid>C6C</sourceid><recordid>eNp9kDtLxEAUhQdRcH38AasBG5vo3HklWy7iCxZsVhuL4e7kZjeSZHQmUfz3RiMIFla3ON85XD7GTkCcgxD5RQKlQGVC6kyI-VxlZofNQOsis0LJXTYTBZhMwRz22UFKz0KAtkrM2NNqS3xDXWgp8VDx_j3wxZD6iE2NHa9TaLCfokeKfe3rpqmHlpe4HQHikXx4o0glr2JouQ99Hzpe1dSU6YjtVdgkOv65h-zh-mp1eZst72_uLhfLzMs877McS4_g19qAQVVaTVavEX05RyzBFLlGXQiysgJLRldrlSslvTAlFihRqkN2Nu2-xPA6UOpdWydPTYMdhSE5BUYV2kpRjOjpH_Q5DLEbvxspMEIqC3ak5ET5GFKKVLmXWLcYPxwI9-XbTb7d6Nt9-3ZmLKmplEa421D8nf6n9QkkQYOC</recordid><startdate>20240901</startdate><enddate>20240901</enddate><creator>Gardiner, Donald M.</creator><creator>Smith, Linda J.</creator><creator>Rusu, Anca</creator><creator>Aitken, Elizabeth A. 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Verticillium dahliae Kleb.
In Australian cotton growing regions two pathotypes of
V. dahliae
are described, namely non-defoliating and defoliating, classified on their ability to cause defoliation in cotton (
Gossypium hirsutum
) as well as okra (
Abelmoschus esculentus)
and olives (
Olea europaea
). Herein we report the genomes of two isolates of
V. dahliae
, one predicted to be non-defoliating and the other predicted to be defoliating. Phylogenomic analysis places each isolate into separate clades, but the highly aggressive, predicted defoliating, strain lacks the genomic features reported as important for causing defoliation on cotton in other regions.</abstract><cop>Dordrecht</cop><pub>Springer Netherlands</pub><doi>10.1007/s13313-024-00993-5</doi><tpages>7</tpages><orcidid>https://orcid.org/0000-0002-2162-8716</orcidid><oa>free_for_read</oa></addata></record> |
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| subjects | Abelmoschus esculentus Agriculture Biomedical and Life Sciences Cotton Defoliation Ecology Entomology fungi genome Genomes Genomic analysis genomics Gossypium hirsutum Life Sciences Okra Olea europaea Olives Original Research Article pathotypes Plant Pathology Plant Sciences Verticillium dahliae Verticillium wilt |
| title | The genomes of two Australian isolates of Verticillium dahliae recovered from cotton fields |
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