RETRACTED ARTICLE: KDM4 orchestrates epigenomic remodeling of senescent cells and potentiates the senescence-associated secretory phenotype
Cellular senescence restrains the expansion of neoplastic cells through several layers of regulation. We report that the histone H3-specific demethylase KDM4 is expressed as human stromal cells undergo senescence. In clinical oncology, upregulated KDM4 and diminished H3K9/H3K36 methylation correlate...
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Veröffentlicht in: | Nature aging 2021-05, Vol.1 (5), p.454-472 |
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creator | Zhang, Boyi Long, Qilai Wu, Shanshan Xu, Qixia Song, Shuling Han, Liu Qian, Min Ren, Xiaohui Liu, Hanxin Jiang, Jing Guo, Jianming Zhang, Xiaoling Chang, Xing Fu, Qiang Lam, Eric W-F Campisi, Judith Kirkland, James L. Sun, Yu |
description | Cellular senescence restrains the expansion of neoplastic cells through several layers of regulation. We report that the histone H3-specific demethylase KDM4 is expressed as human stromal cells undergo senescence. In clinical oncology, upregulated KDM4 and diminished H3K9/H3K36 methylation correlate with poorer survival of patients with prostate cancer after chemotherapy. Global chromatin accessibility mapping via assay for transposase-accessible chromatin with high-throughput sequencing, and expression profiling through RNA sequencing, reveal global changes of chromatin openness and spatiotemporal reprogramming of the transcriptomic landscape, which underlie the senescence-associated secretory phenotype (SASP). Selective targeting of KDM4 dampens the SASP of senescent stromal cells, promotes cancer cell apoptosis in the treatment-damaged tumor microenvironment and prolongs survival of experimental animals. Our study supports dynamic changes of H3K9/H3K36 methylation during senescence, identifies an unusually permissive chromatin state and unmasks KDM4 as a key SASP modulator. KDM4 targeting presents a new therapeutic avenue to manipulate cellular senescence and limit its contribution to age-related pathologies, including cancer.
Senescent cells and their production of inflammatory cytokines (senescence-associated secretory phenotype) affects aging and disease, including cancer. Zhang et al. report that epigenomic remodeling by KDM4 controls the senescence-associated secretory phenotype, and KDM4 expression by stromal cells of the tumor microenvironment promotes prostate cancer. |
doi_str_mv | 10.1038/s43587-021-00063-1 |
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Senescent cells and their production of inflammatory cytokines (senescence-associated secretory phenotype) affects aging and disease, including cancer. Zhang et al. report that epigenomic remodeling by KDM4 controls the senescence-associated secretory phenotype, and KDM4 expression by stromal cells of the tumor microenvironment promotes prostate cancer.</description><identifier>ISSN: 2662-8465</identifier><identifier>EISSN: 2662-8465</identifier><identifier>DOI: 10.1038/s43587-021-00063-1</identifier><language>eng</language><publisher>New York: Nature Publishing Group US</publisher><subject>38/5 ; 38/79 ; 38/91 ; 631/443/7 ; 631/80/509 ; 692/699/67 ; 82 ; 82/47 ; 82/75 ; Biomedical and Life Sciences ; Genotype & phenotype ; Life Sciences ; Prostate cancer ; Senescence</subject><ispartof>Nature aging, 2021-05, Vol.1 (5), p.454-472</ispartof><rights>The Author(s), under exclusive licence to Springer Nature America, Inc. 2021. Springer Nature or its licensor (e.g. a society or other partner) holds exclusive rights to this article under a publishing agreement with the author(s) or other rightsholder(s); author self-archiving of the accepted manuscript version of this article is solely governed by the terms of such publishing agreement and applicable law.</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><cites>FETCH-LOGICAL-c1591-f07f35b94d2b815a1276b14e28b8511abe48f471d64386fbc97dec85d05e54503</cites><orcidid>0000-0002-6932-7103 ; 0000-0003-1274-3576 ; 0000-0001-7121-9112</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://link.springer.com/content/pdf/10.1038/s43587-021-00063-1$$EPDF$$P50$$Gspringer$$H</linktopdf><linktohtml>$$Uhttps://link.springer.com/10.1038/s43587-021-00063-1$$EHTML$$P50$$Gspringer$$H</linktohtml><link.rule.ids>314,776,780,27901,27902,41464,42533,51294</link.rule.ids></links><search><creatorcontrib>Zhang, Boyi</creatorcontrib><creatorcontrib>Long, Qilai</creatorcontrib><creatorcontrib>Wu, Shanshan</creatorcontrib><creatorcontrib>Xu, Qixia</creatorcontrib><creatorcontrib>Song, Shuling</creatorcontrib><creatorcontrib>Han, Liu</creatorcontrib><creatorcontrib>Qian, Min</creatorcontrib><creatorcontrib>Ren, Xiaohui</creatorcontrib><creatorcontrib>Liu, Hanxin</creatorcontrib><creatorcontrib>Jiang, Jing</creatorcontrib><creatorcontrib>Guo, Jianming</creatorcontrib><creatorcontrib>Zhang, Xiaoling</creatorcontrib><creatorcontrib>Chang, Xing</creatorcontrib><creatorcontrib>Fu, Qiang</creatorcontrib><creatorcontrib>Lam, Eric W-F</creatorcontrib><creatorcontrib>Campisi, Judith</creatorcontrib><creatorcontrib>Kirkland, James L.</creatorcontrib><creatorcontrib>Sun, Yu</creatorcontrib><title>RETRACTED ARTICLE: KDM4 orchestrates epigenomic remodeling of senescent cells and potentiates the senescence-associated secretory phenotype</title><title>Nature aging</title><addtitle>Nat Aging</addtitle><description>Cellular senescence restrains the expansion of neoplastic cells through several layers of regulation. We report that the histone H3-specific demethylase KDM4 is expressed as human stromal cells undergo senescence. In clinical oncology, upregulated KDM4 and diminished H3K9/H3K36 methylation correlate with poorer survival of patients with prostate cancer after chemotherapy. Global chromatin accessibility mapping via assay for transposase-accessible chromatin with high-throughput sequencing, and expression profiling through RNA sequencing, reveal global changes of chromatin openness and spatiotemporal reprogramming of the transcriptomic landscape, which underlie the senescence-associated secretory phenotype (SASP). Selective targeting of KDM4 dampens the SASP of senescent stromal cells, promotes cancer cell apoptosis in the treatment-damaged tumor microenvironment and prolongs survival of experimental animals. Our study supports dynamic changes of H3K9/H3K36 methylation during senescence, identifies an unusually permissive chromatin state and unmasks KDM4 as a key SASP modulator. KDM4 targeting presents a new therapeutic avenue to manipulate cellular senescence and limit its contribution to age-related pathologies, including cancer.
Senescent cells and their production of inflammatory cytokines (senescence-associated secretory phenotype) affects aging and disease, including cancer. Zhang et al. report that epigenomic remodeling by KDM4 controls the senescence-associated secretory phenotype, and KDM4 expression by stromal cells of the tumor microenvironment promotes prostate cancer.</description><subject>38/5</subject><subject>38/79</subject><subject>38/91</subject><subject>631/443/7</subject><subject>631/80/509</subject><subject>692/699/67</subject><subject>82</subject><subject>82/47</subject><subject>82/75</subject><subject>Biomedical and Life Sciences</subject><subject>Genotype & phenotype</subject><subject>Life Sciences</subject><subject>Prostate cancer</subject><subject>Senescence</subject><issn>2662-8465</issn><issn>2662-8465</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2021</creationdate><recordtype>article</recordtype><sourceid>BENPR</sourceid><recordid>eNp9kM9Kw0AQxoMoWLQv4GnBc3T_Z-utpFWLFaHE85JsJm1Kmo276aHP4Eu7bUQ9eZph5vd9w3xRdEPwHcFM3XvOhEpiTEmMMZYsJmfRiEpJY8WlOP_TX0Zj77cBooIwLOko-lzNs9U0zeYzNF1li3Q5f0Avs1eOrDMb8L3Le_AIunoNrd3VBjnY2RKaul0jWyEPLXgDbY8MNI1HeVuizvZhUJ-E_QZ-GANx7r01x00ZpsZBb90BdZtg3R86uI4uqrzxMP6uV9H74zxLn-Pl29MinS5jQ8SExBVOKiaKCS9poYjICU1kQThQVShBSF4AVxVPSCk5U7IqzCQpwShRYgGCC8yuotvBt3P2Yx-e1Fu7d204qRnBFHNB6ZGiA2Wc9d5BpTtX73J30ATrY-56yF2H3PUpd02CiA0iH-B2De7X-h_VF9JOhhs</recordid><startdate>20210513</startdate><enddate>20210513</enddate><creator>Zhang, Boyi</creator><creator>Long, Qilai</creator><creator>Wu, Shanshan</creator><creator>Xu, Qixia</creator><creator>Song, Shuling</creator><creator>Han, Liu</creator><creator>Qian, Min</creator><creator>Ren, Xiaohui</creator><creator>Liu, Hanxin</creator><creator>Jiang, Jing</creator><creator>Guo, Jianming</creator><creator>Zhang, Xiaoling</creator><creator>Chang, Xing</creator><creator>Fu, Qiang</creator><creator>Lam, Eric W-F</creator><creator>Campisi, Judith</creator><creator>Kirkland, James L.</creator><creator>Sun, Yu</creator><general>Nature Publishing Group US</general><general>Nature Publishing Group</general><scope>AAYXX</scope><scope>CITATION</scope><scope>3V.</scope><scope>7X7</scope><scope>7XB</scope><scope>8C1</scope><scope>8FI</scope><scope>8FJ</scope><scope>8FK</scope><scope>ABUWG</scope><scope>AFKRA</scope><scope>BENPR</scope><scope>CCPQU</scope><scope>FYUFA</scope><scope>GHDGH</scope><scope>K9.</scope><scope>M0S</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>PRINS</scope><orcidid>https://orcid.org/0000-0002-6932-7103</orcidid><orcidid>https://orcid.org/0000-0003-1274-3576</orcidid><orcidid>https://orcid.org/0000-0001-7121-9112</orcidid></search><sort><creationdate>20210513</creationdate><title>RETRACTED ARTICLE: KDM4 orchestrates epigenomic remodeling of senescent cells and potentiates the senescence-associated secretory phenotype</title><author>Zhang, Boyi ; Long, Qilai ; Wu, Shanshan ; Xu, Qixia ; Song, Shuling ; Han, Liu ; Qian, Min ; Ren, Xiaohui ; Liu, Hanxin ; Jiang, Jing ; Guo, Jianming ; Zhang, Xiaoling ; Chang, Xing ; Fu, Qiang ; Lam, Eric W-F ; Campisi, Judith ; Kirkland, James L. ; Sun, Yu</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c1591-f07f35b94d2b815a1276b14e28b8511abe48f471d64386fbc97dec85d05e54503</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2021</creationdate><topic>38/5</topic><topic>38/79</topic><topic>38/91</topic><topic>631/443/7</topic><topic>631/80/509</topic><topic>692/699/67</topic><topic>82</topic><topic>82/47</topic><topic>82/75</topic><topic>Biomedical and Life Sciences</topic><topic>Genotype & phenotype</topic><topic>Life Sciences</topic><topic>Prostate cancer</topic><topic>Senescence</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Zhang, Boyi</creatorcontrib><creatorcontrib>Long, Qilai</creatorcontrib><creatorcontrib>Wu, Shanshan</creatorcontrib><creatorcontrib>Xu, Qixia</creatorcontrib><creatorcontrib>Song, Shuling</creatorcontrib><creatorcontrib>Han, Liu</creatorcontrib><creatorcontrib>Qian, Min</creatorcontrib><creatorcontrib>Ren, Xiaohui</creatorcontrib><creatorcontrib>Liu, Hanxin</creatorcontrib><creatorcontrib>Jiang, Jing</creatorcontrib><creatorcontrib>Guo, Jianming</creatorcontrib><creatorcontrib>Zhang, Xiaoling</creatorcontrib><creatorcontrib>Chang, Xing</creatorcontrib><creatorcontrib>Fu, Qiang</creatorcontrib><creatorcontrib>Lam, Eric W-F</creatorcontrib><creatorcontrib>Campisi, Judith</creatorcontrib><creatorcontrib>Kirkland, James L.</creatorcontrib><creatorcontrib>Sun, Yu</creatorcontrib><collection>CrossRef</collection><collection>ProQuest Central (Corporate)</collection><collection>Health & Medical Collection</collection><collection>ProQuest Central (purchase pre-March 2016)</collection><collection>Public Health Database</collection><collection>Hospital Premium Collection</collection><collection>Hospital Premium Collection (Alumni Edition)</collection><collection>ProQuest Central (Alumni) (purchase pre-March 2016)</collection><collection>ProQuest Central (Alumni Edition)</collection><collection>ProQuest Central UK/Ireland</collection><collection>ProQuest Central</collection><collection>ProQuest One Community College</collection><collection>Health Research Premium Collection</collection><collection>Health Research Premium Collection (Alumni)</collection><collection>ProQuest Health & Medical Complete (Alumni)</collection><collection>Health & Medical Collection (Alumni Edition)</collection><collection>ProQuest One Academic Eastern Edition (DO NOT USE)</collection><collection>ProQuest One Academic</collection><collection>ProQuest One Academic UKI Edition</collection><collection>ProQuest Central China</collection><jtitle>Nature aging</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Zhang, Boyi</au><au>Long, Qilai</au><au>Wu, Shanshan</au><au>Xu, Qixia</au><au>Song, Shuling</au><au>Han, Liu</au><au>Qian, Min</au><au>Ren, Xiaohui</au><au>Liu, Hanxin</au><au>Jiang, Jing</au><au>Guo, Jianming</au><au>Zhang, Xiaoling</au><au>Chang, Xing</au><au>Fu, Qiang</au><au>Lam, Eric W-F</au><au>Campisi, Judith</au><au>Kirkland, James L.</au><au>Sun, Yu</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>RETRACTED ARTICLE: KDM4 orchestrates epigenomic remodeling of senescent cells and potentiates the senescence-associated secretory phenotype</atitle><jtitle>Nature aging</jtitle><stitle>Nat Aging</stitle><date>2021-05-13</date><risdate>2021</risdate><volume>1</volume><issue>5</issue><spage>454</spage><epage>472</epage><pages>454-472</pages><issn>2662-8465</issn><eissn>2662-8465</eissn><abstract>Cellular senescence restrains the expansion of neoplastic cells through several layers of regulation. We report that the histone H3-specific demethylase KDM4 is expressed as human stromal cells undergo senescence. In clinical oncology, upregulated KDM4 and diminished H3K9/H3K36 methylation correlate with poorer survival of patients with prostate cancer after chemotherapy. Global chromatin accessibility mapping via assay for transposase-accessible chromatin with high-throughput sequencing, and expression profiling through RNA sequencing, reveal global changes of chromatin openness and spatiotemporal reprogramming of the transcriptomic landscape, which underlie the senescence-associated secretory phenotype (SASP). Selective targeting of KDM4 dampens the SASP of senescent stromal cells, promotes cancer cell apoptosis in the treatment-damaged tumor microenvironment and prolongs survival of experimental animals. Our study supports dynamic changes of H3K9/H3K36 methylation during senescence, identifies an unusually permissive chromatin state and unmasks KDM4 as a key SASP modulator. KDM4 targeting presents a new therapeutic avenue to manipulate cellular senescence and limit its contribution to age-related pathologies, including cancer.
Senescent cells and their production of inflammatory cytokines (senescence-associated secretory phenotype) affects aging and disease, including cancer. Zhang et al. report that epigenomic remodeling by KDM4 controls the senescence-associated secretory phenotype, and KDM4 expression by stromal cells of the tumor microenvironment promotes prostate cancer.</abstract><cop>New York</cop><pub>Nature Publishing Group US</pub><doi>10.1038/s43587-021-00063-1</doi><tpages>19</tpages><orcidid>https://orcid.org/0000-0002-6932-7103</orcidid><orcidid>https://orcid.org/0000-0003-1274-3576</orcidid><orcidid>https://orcid.org/0000-0001-7121-9112</orcidid><oa>free_for_read</oa></addata></record> |
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subjects | 38/5 38/79 38/91 631/443/7 631/80/509 692/699/67 82 82/47 82/75 Biomedical and Life Sciences Genotype & phenotype Life Sciences Prostate cancer Senescence |
title | RETRACTED ARTICLE: KDM4 orchestrates epigenomic remodeling of senescent cells and potentiates the senescence-associated secretory phenotype |
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