Maximizing Eucalyptus pilularis progeny selection using a parentage matrix obtained with microsatellite markers
Eucalyptus pilularis Smith is renowned for its high-quality wood, rapid growth, and adaptability to diverse soil conditions. This study aimed to evaluate the use of the molecular kinship matrix to estimate genetic parameters for E. pilularis selection and the potential establishment of a base popula...
Gespeichert in:
Veröffentlicht in: | Euphytica 2024-07, Vol.220 (7), p.97, Article 97 |
---|---|
Hauptverfasser: | , , , , , , |
Format: | Artikel |
Sprache: | eng |
Schlagworte: | |
Online-Zugang: | Volltext |
Tags: |
Tag hinzufügen
Keine Tags, Fügen Sie den ersten Tag hinzu!
|
container_end_page | |
---|---|
container_issue | 7 |
container_start_page | 97 |
container_title | Euphytica |
container_volume | 220 |
creator | Brizola, Gustavo E. A. Peres, Fabiana S. B. Silva, Paulo H. M. de Oliveira, Ximena M. Nunes, Maria Paula B. A. de O. Silva, Dandara Yasmim B. Tambarussi, Evandro Vagner |
description | Eucalyptus pilularis
Smith is renowned for its high-quality wood, rapid growth, and adaptability to diverse soil conditions. This study aimed to evaluate the use of the molecular kinship matrix to estimate genetic parameters for
E. pilularis
selection and the potential establishment of a base population. The experiment involved 13 provenances and 115 progenies, using a randomized complete block design with five replicates and linear plots consisting of five plants each. Genetic parameters for the traits diameter at breast height (DBH), total height, and volume were evaluated at five years of age using the linear mixed model. Results indicated a survival rate for the population of 73.11%, an average total height of 18.65 m, DBH of 14.28 cm, and volume of 14.57 cm
3
. By adjusting the kinship matrix, the estimated values of heritability and genetic coefficients of variation decreased, indicating that there would be errors in these estimates and in the genetic gains if the progenies were assumed to be half-siblings. The discrepancy in rankings derived from the conventional half-sibling matrix versus molecular kinship matrix poses a significant challenge for experts in forest species genetic improvement. Our findings indicate not only inflated estimations of genetic parameters and gains, but also disparities in rankings when accounting for true levels of relatedness among individuals based on the molecular matrix. |
doi_str_mv | 10.1007/s10681-024-03356-9 |
format | Article |
fullrecord | <record><control><sourceid>proquest_cross</sourceid><recordid>TN_cdi_proquest_journals_3064400181</recordid><sourceformat>XML</sourceformat><sourcesystem>PC</sourcesystem><sourcerecordid>3064400181</sourcerecordid><originalsourceid>FETCH-LOGICAL-c200t-907bcede47bd32a4c13e17027d89a73cf0129b9efd2431cde444d5740d8bd1163</originalsourceid><addsrcrecordid>eNp9kD1PwzAQhi0EEqXwB5gsMRvOsRMnI6rKh1TEArPlOE5wSZNgO6Ll1-MQJDamu-F57149CF1SuKYA4sZTyHJKIOEEGEszUhyhBU0FIylkcIwWAJSThLHsFJ15vwWAQqSwQP2T2tud_bJdg9ejVu1hCKPHg23HVjkbN9c3pjtgb1qjg-07PPoJVnhQznRBNQbvVHB2j_syKNuZCn_a8IZ3Vrveq2Da1oaJce_G-XN0UqvWm4vfuUSvd-uX1QPZPN8_rm43RCcAgRQgSm0qw0VZsURxTZmhAhJR5YUSTNdAk6IsTF0lnFEdQc6rVHCo8rKiNGNLdDXfjf0_RuOD3Paj6-JLySDjPPrIaaSSmZqqemdqOTgbmx4kBTmJlbNYGcXKH7GyiCE2h3yEu8a4v9P_pL4BJ9N-KQ</addsrcrecordid><sourcetype>Aggregation Database</sourcetype><iscdi>true</iscdi><recordtype>article</recordtype><pqid>3064400181</pqid></control><display><type>article</type><title>Maximizing Eucalyptus pilularis progeny selection using a parentage matrix obtained with microsatellite markers</title><source>SpringerNature Journals</source><creator>Brizola, Gustavo E. A. ; Peres, Fabiana S. B. ; Silva, Paulo H. M. ; de Oliveira, Ximena M. ; Nunes, Maria Paula B. A. ; de O. Silva, Dandara Yasmim B. ; Tambarussi, Evandro Vagner</creator><creatorcontrib>Brizola, Gustavo E. A. ; Peres, Fabiana S. B. ; Silva, Paulo H. M. ; de Oliveira, Ximena M. ; Nunes, Maria Paula B. A. ; de O. Silva, Dandara Yasmim B. ; Tambarussi, Evandro Vagner</creatorcontrib><description>Eucalyptus pilularis
Smith is renowned for its high-quality wood, rapid growth, and adaptability to diverse soil conditions. This study aimed to evaluate the use of the molecular kinship matrix to estimate genetic parameters for
E. pilularis
selection and the potential establishment of a base population. The experiment involved 13 provenances and 115 progenies, using a randomized complete block design with five replicates and linear plots consisting of five plants each. Genetic parameters for the traits diameter at breast height (DBH), total height, and volume were evaluated at five years of age using the linear mixed model. Results indicated a survival rate for the population of 73.11%, an average total height of 18.65 m, DBH of 14.28 cm, and volume of 14.57 cm
3
. By adjusting the kinship matrix, the estimated values of heritability and genetic coefficients of variation decreased, indicating that there would be errors in these estimates and in the genetic gains if the progenies were assumed to be half-siblings. The discrepancy in rankings derived from the conventional half-sibling matrix versus molecular kinship matrix poses a significant challenge for experts in forest species genetic improvement. Our findings indicate not only inflated estimations of genetic parameters and gains, but also disparities in rankings when accounting for true levels of relatedness among individuals based on the molecular matrix.</description><identifier>ISSN: 0014-2336</identifier><identifier>EISSN: 1573-5060</identifier><identifier>DOI: 10.1007/s10681-024-03356-9</identifier><language>eng</language><publisher>Dordrecht: Springer Netherlands</publisher><subject>Adaptability ; Biomedical and Life Sciences ; Biotechnology ; Cellulose ; Coefficient of variation ; Estimates ; Eucalyptus ; Eucalyptus pilularis ; Flooring ; Genetic diversity ; Genetic markers ; Hardwoods ; Height ; Heritability ; Life Sciences ; Microsatellites ; Parameters ; Plant Genetics and Genomics ; Plant Pathology ; Plant Physiology ; Plant Sciences ; Plantations ; Productivity ; Siblings ; Soil conditions ; Survival</subject><ispartof>Euphytica, 2024-07, Vol.220 (7), p.97, Article 97</ispartof><rights>The Author(s), under exclusive licence to Springer Nature B.V. 2024. Springer Nature or its licensor (e.g. a society or other partner) holds exclusive rights to this article under a publishing agreement with the author(s) or other rightsholder(s); author self-archiving of the accepted manuscript version of this article is solely governed by the terms of such publishing agreement and applicable law.</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><cites>FETCH-LOGICAL-c200t-907bcede47bd32a4c13e17027d89a73cf0129b9efd2431cde444d5740d8bd1163</cites><orcidid>0000-0002-2926-8719 ; 0009-0007-9218-9590 ; 0000-0002-9887-7075 ; 0000-0001-8781-0521 ; 0000-0001-9478-5379 ; 0000-0001-8139-8417 ; 0000-0002-8050-8685</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://link.springer.com/content/pdf/10.1007/s10681-024-03356-9$$EPDF$$P50$$Gspringer$$H</linktopdf><linktohtml>$$Uhttps://link.springer.com/10.1007/s10681-024-03356-9$$EHTML$$P50$$Gspringer$$H</linktohtml><link.rule.ids>315,781,785,27929,27930,41493,42562,51324</link.rule.ids></links><search><creatorcontrib>Brizola, Gustavo E. A.</creatorcontrib><creatorcontrib>Peres, Fabiana S. B.</creatorcontrib><creatorcontrib>Silva, Paulo H. M.</creatorcontrib><creatorcontrib>de Oliveira, Ximena M.</creatorcontrib><creatorcontrib>Nunes, Maria Paula B. A.</creatorcontrib><creatorcontrib>de O. Silva, Dandara Yasmim B.</creatorcontrib><creatorcontrib>Tambarussi, Evandro Vagner</creatorcontrib><title>Maximizing Eucalyptus pilularis progeny selection using a parentage matrix obtained with microsatellite markers</title><title>Euphytica</title><addtitle>Euphytica</addtitle><description>Eucalyptus pilularis
Smith is renowned for its high-quality wood, rapid growth, and adaptability to diverse soil conditions. This study aimed to evaluate the use of the molecular kinship matrix to estimate genetic parameters for
E. pilularis
selection and the potential establishment of a base population. The experiment involved 13 provenances and 115 progenies, using a randomized complete block design with five replicates and linear plots consisting of five plants each. Genetic parameters for the traits diameter at breast height (DBH), total height, and volume were evaluated at five years of age using the linear mixed model. Results indicated a survival rate for the population of 73.11%, an average total height of 18.65 m, DBH of 14.28 cm, and volume of 14.57 cm
3
. By adjusting the kinship matrix, the estimated values of heritability and genetic coefficients of variation decreased, indicating that there would be errors in these estimates and in the genetic gains if the progenies were assumed to be half-siblings. The discrepancy in rankings derived from the conventional half-sibling matrix versus molecular kinship matrix poses a significant challenge for experts in forest species genetic improvement. Our findings indicate not only inflated estimations of genetic parameters and gains, but also disparities in rankings when accounting for true levels of relatedness among individuals based on the molecular matrix.</description><subject>Adaptability</subject><subject>Biomedical and Life Sciences</subject><subject>Biotechnology</subject><subject>Cellulose</subject><subject>Coefficient of variation</subject><subject>Estimates</subject><subject>Eucalyptus</subject><subject>Eucalyptus pilularis</subject><subject>Flooring</subject><subject>Genetic diversity</subject><subject>Genetic markers</subject><subject>Hardwoods</subject><subject>Height</subject><subject>Heritability</subject><subject>Life Sciences</subject><subject>Microsatellites</subject><subject>Parameters</subject><subject>Plant Genetics and Genomics</subject><subject>Plant Pathology</subject><subject>Plant Physiology</subject><subject>Plant Sciences</subject><subject>Plantations</subject><subject>Productivity</subject><subject>Siblings</subject><subject>Soil conditions</subject><subject>Survival</subject><issn>0014-2336</issn><issn>1573-5060</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2024</creationdate><recordtype>article</recordtype><recordid>eNp9kD1PwzAQhi0EEqXwB5gsMRvOsRMnI6rKh1TEArPlOE5wSZNgO6Ll1-MQJDamu-F57149CF1SuKYA4sZTyHJKIOEEGEszUhyhBU0FIylkcIwWAJSThLHsFJ15vwWAQqSwQP2T2tud_bJdg9ejVu1hCKPHg23HVjkbN9c3pjtgb1qjg-07PPoJVnhQznRBNQbvVHB2j_syKNuZCn_a8IZ3Vrveq2Da1oaJce_G-XN0UqvWm4vfuUSvd-uX1QPZPN8_rm43RCcAgRQgSm0qw0VZsURxTZmhAhJR5YUSTNdAk6IsTF0lnFEdQc6rVHCo8rKiNGNLdDXfjf0_RuOD3Paj6-JLySDjPPrIaaSSmZqqemdqOTgbmx4kBTmJlbNYGcXKH7GyiCE2h3yEu8a4v9P_pL4BJ9N-KQ</recordid><startdate>20240701</startdate><enddate>20240701</enddate><creator>Brizola, Gustavo E. A.</creator><creator>Peres, Fabiana S. B.</creator><creator>Silva, Paulo H. M.</creator><creator>de Oliveira, Ximena M.</creator><creator>Nunes, Maria Paula B. A.</creator><creator>de O. Silva, Dandara Yasmim B.</creator><creator>Tambarussi, Evandro Vagner</creator><general>Springer Netherlands</general><general>Springer Nature B.V</general><scope>AAYXX</scope><scope>CITATION</scope><scope>7SN</scope><scope>7SS</scope><scope>7T7</scope><scope>7TM</scope><scope>8FD</scope><scope>C1K</scope><scope>FR3</scope><scope>M7N</scope><scope>P64</scope><scope>RC3</scope><orcidid>https://orcid.org/0000-0002-2926-8719</orcidid><orcidid>https://orcid.org/0009-0007-9218-9590</orcidid><orcidid>https://orcid.org/0000-0002-9887-7075</orcidid><orcidid>https://orcid.org/0000-0001-8781-0521</orcidid><orcidid>https://orcid.org/0000-0001-9478-5379</orcidid><orcidid>https://orcid.org/0000-0001-8139-8417</orcidid><orcidid>https://orcid.org/0000-0002-8050-8685</orcidid></search><sort><creationdate>20240701</creationdate><title>Maximizing Eucalyptus pilularis progeny selection using a parentage matrix obtained with microsatellite markers</title><author>Brizola, Gustavo E. A. ; Peres, Fabiana S. B. ; Silva, Paulo H. M. ; de Oliveira, Ximena M. ; Nunes, Maria Paula B. A. ; de O. Silva, Dandara Yasmim B. ; Tambarussi, Evandro Vagner</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c200t-907bcede47bd32a4c13e17027d89a73cf0129b9efd2431cde444d5740d8bd1163</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2024</creationdate><topic>Adaptability</topic><topic>Biomedical and Life Sciences</topic><topic>Biotechnology</topic><topic>Cellulose</topic><topic>Coefficient of variation</topic><topic>Estimates</topic><topic>Eucalyptus</topic><topic>Eucalyptus pilularis</topic><topic>Flooring</topic><topic>Genetic diversity</topic><topic>Genetic markers</topic><topic>Hardwoods</topic><topic>Height</topic><topic>Heritability</topic><topic>Life Sciences</topic><topic>Microsatellites</topic><topic>Parameters</topic><topic>Plant Genetics and Genomics</topic><topic>Plant Pathology</topic><topic>Plant Physiology</topic><topic>Plant Sciences</topic><topic>Plantations</topic><topic>Productivity</topic><topic>Siblings</topic><topic>Soil conditions</topic><topic>Survival</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Brizola, Gustavo E. A.</creatorcontrib><creatorcontrib>Peres, Fabiana S. B.</creatorcontrib><creatorcontrib>Silva, Paulo H. M.</creatorcontrib><creatorcontrib>de Oliveira, Ximena M.</creatorcontrib><creatorcontrib>Nunes, Maria Paula B. A.</creatorcontrib><creatorcontrib>de O. Silva, Dandara Yasmim B.</creatorcontrib><creatorcontrib>Tambarussi, Evandro Vagner</creatorcontrib><collection>CrossRef</collection><collection>Ecology Abstracts</collection><collection>Entomology Abstracts (Full archive)</collection><collection>Industrial and Applied Microbiology Abstracts (Microbiology A)</collection><collection>Nucleic Acids Abstracts</collection><collection>Technology Research Database</collection><collection>Environmental Sciences and Pollution Management</collection><collection>Engineering Research Database</collection><collection>Algology Mycology and Protozoology Abstracts (Microbiology C)</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>Genetics Abstracts</collection><jtitle>Euphytica</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Brizola, Gustavo E. A.</au><au>Peres, Fabiana S. B.</au><au>Silva, Paulo H. M.</au><au>de Oliveira, Ximena M.</au><au>Nunes, Maria Paula B. A.</au><au>de O. Silva, Dandara Yasmim B.</au><au>Tambarussi, Evandro Vagner</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Maximizing Eucalyptus pilularis progeny selection using a parentage matrix obtained with microsatellite markers</atitle><jtitle>Euphytica</jtitle><stitle>Euphytica</stitle><date>2024-07-01</date><risdate>2024</risdate><volume>220</volume><issue>7</issue><spage>97</spage><pages>97-</pages><artnum>97</artnum><issn>0014-2336</issn><eissn>1573-5060</eissn><abstract>Eucalyptus pilularis
Smith is renowned for its high-quality wood, rapid growth, and adaptability to diverse soil conditions. This study aimed to evaluate the use of the molecular kinship matrix to estimate genetic parameters for
E. pilularis
selection and the potential establishment of a base population. The experiment involved 13 provenances and 115 progenies, using a randomized complete block design with five replicates and linear plots consisting of five plants each. Genetic parameters for the traits diameter at breast height (DBH), total height, and volume were evaluated at five years of age using the linear mixed model. Results indicated a survival rate for the population of 73.11%, an average total height of 18.65 m, DBH of 14.28 cm, and volume of 14.57 cm
3
. By adjusting the kinship matrix, the estimated values of heritability and genetic coefficients of variation decreased, indicating that there would be errors in these estimates and in the genetic gains if the progenies were assumed to be half-siblings. The discrepancy in rankings derived from the conventional half-sibling matrix versus molecular kinship matrix poses a significant challenge for experts in forest species genetic improvement. Our findings indicate not only inflated estimations of genetic parameters and gains, but also disparities in rankings when accounting for true levels of relatedness among individuals based on the molecular matrix.</abstract><cop>Dordrecht</cop><pub>Springer Netherlands</pub><doi>10.1007/s10681-024-03356-9</doi><orcidid>https://orcid.org/0000-0002-2926-8719</orcidid><orcidid>https://orcid.org/0009-0007-9218-9590</orcidid><orcidid>https://orcid.org/0000-0002-9887-7075</orcidid><orcidid>https://orcid.org/0000-0001-8781-0521</orcidid><orcidid>https://orcid.org/0000-0001-9478-5379</orcidid><orcidid>https://orcid.org/0000-0001-8139-8417</orcidid><orcidid>https://orcid.org/0000-0002-8050-8685</orcidid></addata></record> |
fulltext | fulltext |
identifier | ISSN: 0014-2336 |
ispartof | Euphytica, 2024-07, Vol.220 (7), p.97, Article 97 |
issn | 0014-2336 1573-5060 |
language | eng |
recordid | cdi_proquest_journals_3064400181 |
source | SpringerNature Journals |
subjects | Adaptability Biomedical and Life Sciences Biotechnology Cellulose Coefficient of variation Estimates Eucalyptus Eucalyptus pilularis Flooring Genetic diversity Genetic markers Hardwoods Height Heritability Life Sciences Microsatellites Parameters Plant Genetics and Genomics Plant Pathology Plant Physiology Plant Sciences Plantations Productivity Siblings Soil conditions Survival |
title | Maximizing Eucalyptus pilularis progeny selection using a parentage matrix obtained with microsatellite markers |
url | https://sfx.bib-bvb.de/sfx_tum?ctx_ver=Z39.88-2004&ctx_enc=info:ofi/enc:UTF-8&ctx_tim=2024-12-14T22%3A24%3A32IST&url_ver=Z39.88-2004&url_ctx_fmt=infofi/fmt:kev:mtx:ctx&rfr_id=info:sid/primo.exlibrisgroup.com:primo3-Article-proquest_cross&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rft.genre=article&rft.atitle=Maximizing%20Eucalyptus%20pilularis%20progeny%20selection%20using%20a%20parentage%20matrix%20obtained%20with%20microsatellite%20markers&rft.jtitle=Euphytica&rft.au=Brizola,%20Gustavo%20E.%20A.&rft.date=2024-07-01&rft.volume=220&rft.issue=7&rft.spage=97&rft.pages=97-&rft.artnum=97&rft.issn=0014-2336&rft.eissn=1573-5060&rft_id=info:doi/10.1007/s10681-024-03356-9&rft_dat=%3Cproquest_cross%3E3064400181%3C/proquest_cross%3E%3Curl%3E%3C/url%3E&disable_directlink=true&sfx.directlink=off&sfx.report_link=0&rft_id=info:oai/&rft_pqid=3064400181&rft_id=info:pmid/&rfr_iscdi=true |