Bacterial biogeography in China and its association to land use and soil organic carbon
● 6102 high-quality sequencing results of soil bacterial samples were re-analyzed. ● The type of land use was the principal driver of bacterial richness and diversity. ● SOC content is positively correlated with key bacteria and total nitrogen content. Soil organic carbon (SOC) is the largest pool o...
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Veröffentlicht in: | Soil Ecology Letters 2023-12, Vol.5 (4), p.230172, Article 230172 |
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description | ● 6102 high-quality sequencing results of soil bacterial samples were re-analyzed. ● The type of land use was the principal driver of bacterial richness and diversity. ● SOC content is positively correlated with key bacteria and total nitrogen content.
Soil organic carbon (SOC) is the largest pool of carbon in terrestrial ecosystems and plays a crucial role in regulating atmospheric CO 2 concentrations. Identifying the essential relationship between soil bacterial communities and SOC concentration is complicated because of many factors, one of which is geography. We systematically re-analyzed 6102 high-quality bacterial samples in China to delineate the bacterial biogeographic distribution of bacterial communities and identify key species associated with SOC concentration at the continental scale. The type of land use was the principal driver of bacterial richness and diversity, and we used machine learning to calculate its influence on microbial composition and their co-occurrence relationship with SOC concentration. Cultivated land was much more complex than forest, grassland, wetland and wasteland, with high SOC concentrations tending to enrich bacteria such as Rubrobacter, Terrimonas and Sphingomona. SOC concentration was positively correlated with the amounts of soil total nitrogen and key bacteria Xanthobacteraceae, Streptomyces and Acidobacteria but was negatively correlated with soil pH, total phosphorus and Micrococcaceae. Our study combined the SOC pool with bacteria and indicated that specific bacteria may be key factors affecting SOC concentration, forcing us to think about microbial communities associated with climate change in a new way. |
doi_str_mv | 10.1007/s42832-023-0172-8 |
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Soil organic carbon (SOC) is the largest pool of carbon in terrestrial ecosystems and plays a crucial role in regulating atmospheric CO 2 concentrations. Identifying the essential relationship between soil bacterial communities and SOC concentration is complicated because of many factors, one of which is geography. We systematically re-analyzed 6102 high-quality bacterial samples in China to delineate the bacterial biogeographic distribution of bacterial communities and identify key species associated with SOC concentration at the continental scale. The type of land use was the principal driver of bacterial richness and diversity, and we used machine learning to calculate its influence on microbial composition and their co-occurrence relationship with SOC concentration. Cultivated land was much more complex than forest, grassland, wetland and wasteland, with high SOC concentrations tending to enrich bacteria such as Rubrobacter, Terrimonas and Sphingomona. SOC concentration was positively correlated with the amounts of soil total nitrogen and key bacteria Xanthobacteraceae, Streptomyces and Acidobacteria but was negatively correlated with soil pH, total phosphorus and Micrococcaceae. Our study combined the SOC pool with bacteria and indicated that specific bacteria may be key factors affecting SOC concentration, forcing us to think about microbial communities associated with climate change in a new way.</description><identifier>ISSN: 2662-2289</identifier><identifier>EISSN: 2662-2297</identifier><identifier>DOI: 10.1007/s42832-023-0172-8</identifier><language>eng</language><publisher>Beijing: Higher Education Press</publisher><subject>Bacteria ; Biogeography ; Carbon ; Carbon dioxide ; Carbon dioxide concentration ; Climate change ; Correlation ; Cultivated lands ; Earth and Environmental Science ; Ecology ; Environment ; Geographical distribution ; Geography ; Grasslands ; Land use ; land-use type ; Machine learning ; Microbial activity ; Microorganisms ; Nitrogen ; Organic carbon ; Organic soils ; Research Article ; Soil biogeochemical cycling ; Soil chemistry ; Soil microorganisms ; soil organic carbon ; Soil pH ; Soil Science & Conservation ; Soils ; Terrestrial ecosystems</subject><ispartof>Soil Ecology Letters, 2023-12, Vol.5 (4), p.230172, Article 230172</ispartof><rights>Copyright reserved, 2023, Higher Education Press</rights><rights>Higher Education Press 2023</rights><rights>Copyright Springer Nature B.V. Dec 2023</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c408t-28089c637a9819957b631028dcf6e98dbff573f600479e9f8bb94533743aef933</citedby><cites>FETCH-LOGICAL-c408t-28089c637a9819957b631028dcf6e98dbff573f600479e9f8bb94533743aef933</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://link.springer.com/content/pdf/10.1007/s42832-023-0172-8$$EPDF$$P50$$Gspringer$$H</linktopdf><linktohtml>$$Uhttps://www.proquest.com/docview/2921274662?pq-origsite=primo$$EHTML$$P50$$Gproquest$$H</linktohtml><link.rule.ids>314,776,780,21367,27901,27902,33721,41464,42533,43781,51294</link.rule.ids></links><search><creatorcontrib>Lu, Tao</creatorcontrib><creatorcontrib>Xu, Nuohan</creatorcontrib><creatorcontrib>Lei, Chaotang</creatorcontrib><creatorcontrib>Zhang, Qi</creatorcontrib><creatorcontrib>Zhang, Zhenyan</creatorcontrib><creatorcontrib>Sun, Liwei</creatorcontrib><creatorcontrib>He, Feng</creatorcontrib><creatorcontrib>Zhou, Ning-Yi</creatorcontrib><creatorcontrib>Peñuelas, Josep</creatorcontrib><creatorcontrib>Zhu, Yong-Guan</creatorcontrib><creatorcontrib>Qian, Haifeng</creatorcontrib><title>Bacterial biogeography in China and its association to land use and soil organic carbon</title><title>Soil Ecology Letters</title><addtitle>Soil Ecology Letters</addtitle><addtitle>Soil Ecol. Lett</addtitle><description>● 6102 high-quality sequencing results of soil bacterial samples were re-analyzed. ● The type of land use was the principal driver of bacterial richness and diversity. ● SOC content is positively correlated with key bacteria and total nitrogen content.
Soil organic carbon (SOC) is the largest pool of carbon in terrestrial ecosystems and plays a crucial role in regulating atmospheric CO 2 concentrations. Identifying the essential relationship between soil bacterial communities and SOC concentration is complicated because of many factors, one of which is geography. We systematically re-analyzed 6102 high-quality bacterial samples in China to delineate the bacterial biogeographic distribution of bacterial communities and identify key species associated with SOC concentration at the continental scale. The type of land use was the principal driver of bacterial richness and diversity, and we used machine learning to calculate its influence on microbial composition and their co-occurrence relationship with SOC concentration. Cultivated land was much more complex than forest, grassland, wetland and wasteland, with high SOC concentrations tending to enrich bacteria such as Rubrobacter, Terrimonas and Sphingomona. SOC concentration was positively correlated with the amounts of soil total nitrogen and key bacteria Xanthobacteraceae, Streptomyces and Acidobacteria but was negatively correlated with soil pH, total phosphorus and Micrococcaceae. Our study combined the SOC pool with bacteria and indicated that specific bacteria may be key factors affecting SOC concentration, forcing us to think about microbial communities associated with climate change in a new way.</description><subject>Bacteria</subject><subject>Biogeography</subject><subject>Carbon</subject><subject>Carbon dioxide</subject><subject>Carbon dioxide concentration</subject><subject>Climate change</subject><subject>Correlation</subject><subject>Cultivated lands</subject><subject>Earth and Environmental Science</subject><subject>Ecology</subject><subject>Environment</subject><subject>Geographical distribution</subject><subject>Geography</subject><subject>Grasslands</subject><subject>Land use</subject><subject>land-use type</subject><subject>Machine learning</subject><subject>Microbial activity</subject><subject>Microorganisms</subject><subject>Nitrogen</subject><subject>Organic carbon</subject><subject>Organic soils</subject><subject>Research Article</subject><subject>Soil biogeochemical cycling</subject><subject>Soil chemistry</subject><subject>Soil microorganisms</subject><subject>soil organic carbon</subject><subject>Soil pH</subject><subject>Soil Science & Conservation</subject><subject>Soils</subject><subject>Terrestrial ecosystems</subject><issn>2662-2289</issn><issn>2662-2297</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2023</creationdate><recordtype>article</recordtype><sourceid>BENPR</sourceid><recordid>eNp9kD9PwzAQxS0EEhX0A7BZYg7Y5yS2R6j4J1ViATFajmMnroJd7HTotyclCLZOd7p7v3e6h9AVJTeUEH6bSxAMCgKsIJRDIU7QAuoaCgDJT_96Ic_RMucNIQQqSSiUC_Rxr81ok9cDbnzsbOyS3vZ77ANe9T5orEOL_Zixzjkar0cfAx4jHg7zXbY_-xz9gGPqdPAGG52aGC7RmdNDtsvfeoHeHx_eVs_F-vXpZXW3LkxJxFiAIEKamnEtBZWy4k3NKAHRGldbKdrGuYozVxNScmmlE00jy4oxXjJtnWTsAl3PvtsUv3Y2j2oTdylMJxVIoMDL6fdJRWeVSTHnZJ3aJv-p015Rog4RqjlCNUWoDhEqMTEwM3nShs6mf-djkJih3ne9TbbdJpuzcimG0dt0DP0GDPuEeA</recordid><startdate>20231201</startdate><enddate>20231201</enddate><creator>Lu, Tao</creator><creator>Xu, Nuohan</creator><creator>Lei, Chaotang</creator><creator>Zhang, Qi</creator><creator>Zhang, Zhenyan</creator><creator>Sun, Liwei</creator><creator>He, Feng</creator><creator>Zhou, Ning-Yi</creator><creator>Peñuelas, Josep</creator><creator>Zhu, Yong-Guan</creator><creator>Qian, Haifeng</creator><general>Higher Education Press</general><general>Springer Nature B.V</general><scope>AAYXX</scope><scope>CITATION</scope><scope>8FE</scope><scope>8FH</scope><scope>AEUYN</scope><scope>AFKRA</scope><scope>ATCPS</scope><scope>AZQEC</scope><scope>BBNVY</scope><scope>BENPR</scope><scope>BHPHI</scope><scope>CCPQU</scope><scope>DWQXO</scope><scope>GNUQQ</scope><scope>HCIFZ</scope><scope>LK8</scope><scope>M7P</scope><scope>PATMY</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>PRINS</scope><scope>PYCSY</scope></search><sort><creationdate>20231201</creationdate><title>Bacterial biogeography in China and its association to land use and soil organic carbon</title><author>Lu, Tao ; Xu, Nuohan ; Lei, Chaotang ; Zhang, Qi ; Zhang, Zhenyan ; Sun, Liwei ; He, Feng ; Zhou, Ning-Yi ; Peñuelas, Josep ; Zhu, Yong-Guan ; Qian, Haifeng</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c408t-28089c637a9819957b631028dcf6e98dbff573f600479e9f8bb94533743aef933</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2023</creationdate><topic>Bacteria</topic><topic>Biogeography</topic><topic>Carbon</topic><topic>Carbon dioxide</topic><topic>Carbon dioxide concentration</topic><topic>Climate change</topic><topic>Correlation</topic><topic>Cultivated lands</topic><topic>Earth and Environmental Science</topic><topic>Ecology</topic><topic>Environment</topic><topic>Geographical distribution</topic><topic>Geography</topic><topic>Grasslands</topic><topic>Land use</topic><topic>land-use type</topic><topic>Machine learning</topic><topic>Microbial activity</topic><topic>Microorganisms</topic><topic>Nitrogen</topic><topic>Organic carbon</topic><topic>Organic soils</topic><topic>Research Article</topic><topic>Soil biogeochemical cycling</topic><topic>Soil chemistry</topic><topic>Soil microorganisms</topic><topic>soil organic carbon</topic><topic>Soil pH</topic><topic>Soil Science & Conservation</topic><topic>Soils</topic><topic>Terrestrial ecosystems</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Lu, Tao</creatorcontrib><creatorcontrib>Xu, Nuohan</creatorcontrib><creatorcontrib>Lei, Chaotang</creatorcontrib><creatorcontrib>Zhang, Qi</creatorcontrib><creatorcontrib>Zhang, Zhenyan</creatorcontrib><creatorcontrib>Sun, Liwei</creatorcontrib><creatorcontrib>He, Feng</creatorcontrib><creatorcontrib>Zhou, Ning-Yi</creatorcontrib><creatorcontrib>Peñuelas, Josep</creatorcontrib><creatorcontrib>Zhu, Yong-Guan</creatorcontrib><creatorcontrib>Qian, Haifeng</creatorcontrib><collection>CrossRef</collection><collection>ProQuest SciTech Collection</collection><collection>ProQuest Natural Science Collection</collection><collection>ProQuest One Sustainability</collection><collection>ProQuest Central UK/Ireland</collection><collection>Agricultural & Environmental Science Collection</collection><collection>ProQuest Central Essentials</collection><collection>Biological Science Collection</collection><collection>ProQuest Central</collection><collection>Natural Science Collection</collection><collection>ProQuest One Community College</collection><collection>ProQuest Central Korea</collection><collection>ProQuest Central Student</collection><collection>SciTech Premium Collection</collection><collection>ProQuest Biological Science Collection</collection><collection>Biological Science Database</collection><collection>Environmental Science Database</collection><collection>ProQuest One Academic Eastern Edition (DO NOT USE)</collection><collection>ProQuest One Academic</collection><collection>ProQuest One Academic UKI Edition</collection><collection>ProQuest Central China</collection><collection>Environmental Science Collection</collection><jtitle>Soil Ecology Letters</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Lu, Tao</au><au>Xu, Nuohan</au><au>Lei, Chaotang</au><au>Zhang, Qi</au><au>Zhang, Zhenyan</au><au>Sun, Liwei</au><au>He, Feng</au><au>Zhou, Ning-Yi</au><au>Peñuelas, Josep</au><au>Zhu, Yong-Guan</au><au>Qian, Haifeng</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Bacterial biogeography in China and its association to land use and soil organic carbon</atitle><jtitle>Soil Ecology Letters</jtitle><stitle>Soil Ecology Letters</stitle><stitle>Soil Ecol. Lett</stitle><date>2023-12-01</date><risdate>2023</risdate><volume>5</volume><issue>4</issue><spage>230172</spage><pages>230172-</pages><artnum>230172</artnum><issn>2662-2289</issn><eissn>2662-2297</eissn><abstract>● 6102 high-quality sequencing results of soil bacterial samples were re-analyzed. ● The type of land use was the principal driver of bacterial richness and diversity. ● SOC content is positively correlated with key bacteria and total nitrogen content.
Soil organic carbon (SOC) is the largest pool of carbon in terrestrial ecosystems and plays a crucial role in regulating atmospheric CO 2 concentrations. Identifying the essential relationship between soil bacterial communities and SOC concentration is complicated because of many factors, one of which is geography. We systematically re-analyzed 6102 high-quality bacterial samples in China to delineate the bacterial biogeographic distribution of bacterial communities and identify key species associated with SOC concentration at the continental scale. The type of land use was the principal driver of bacterial richness and diversity, and we used machine learning to calculate its influence on microbial composition and their co-occurrence relationship with SOC concentration. Cultivated land was much more complex than forest, grassland, wetland and wasteland, with high SOC concentrations tending to enrich bacteria such as Rubrobacter, Terrimonas and Sphingomona. SOC concentration was positively correlated with the amounts of soil total nitrogen and key bacteria Xanthobacteraceae, Streptomyces and Acidobacteria but was negatively correlated with soil pH, total phosphorus and Micrococcaceae. Our study combined the SOC pool with bacteria and indicated that specific bacteria may be key factors affecting SOC concentration, forcing us to think about microbial communities associated with climate change in a new way.</abstract><cop>Beijing</cop><pub>Higher Education Press</pub><doi>10.1007/s42832-023-0172-8</doi><oa>free_for_read</oa></addata></record> |
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subjects | Bacteria Biogeography Carbon Carbon dioxide Carbon dioxide concentration Climate change Correlation Cultivated lands Earth and Environmental Science Ecology Environment Geographical distribution Geography Grasslands Land use land-use type Machine learning Microbial activity Microorganisms Nitrogen Organic carbon Organic soils Research Article Soil biogeochemical cycling Soil chemistry Soil microorganisms soil organic carbon Soil pH Soil Science & Conservation Soils Terrestrial ecosystems |
title | Bacterial biogeography in China and its association to land use and soil organic carbon |
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