Insights into the diet and trophic ecology of white sharks (Carcharodon carcharias) gained through DNA metabarcoding analyses of cloacal swabs
The white shark (Carcharodon carcharias) is one of the world's largest apex predators found throughout the world's temperate and subtropical marine environments. However, the species has suffered significant declines in recent decades and effective conservation programs require a sound kno...
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description | The white shark (Carcharodon carcharias) is one of the world's largest apex predators found throughout the world's temperate and subtropical marine environments. However, the species has suffered significant declines in recent decades and effective conservation programs require a sound knowledge of white shark biology and ecology. In particular, information on white shark diet across life stages and the species' range is needed to identify critical trophic interactions supporting shark populations and to predict the resilience of white sharks to environmental changes. In this study, we reassess the diet and trophic ecology of white sharks via the genetic analyses of cloacal swabs from 214 juvenile and subadult sharks from eastern Australia. Our findings are largely consistent with those of previous studies based on visual analyses of gut contents but highlight the unprecedented taxonomic resolution of prey items offered by genomic assessments of shark cloacal swabs. Diets consisted primarily of ray‐finned fishes, with Mugiliformes, Carangiformes, Perciformes, and Scombriformes being dominant prey taxa, but with elasmobranchs, marine mammals, and birds also being common dietary constituents. Statistical analyses revealed a significant effect of sex and sampling location on diet composition, indicating biological and spatial variability in diets and predatory behavior. Overall, these findings support the notion that juvenile and subadult white sharks are opportunistic predators, which may provide some level of resilience to shifts in marine resources. However, frequently consumed ray‐finned fishes, many of which are commercially targeted, may be key to supporting white shark populations in eastern Australia. This study represents the most comprehensive analysis of juvenile and subadult white shark diets performed to date and provides added confidence in the genomic analysis of cloacal swabs for dietary assessments of predatory species. These results are expected to help inform management geared toward conserving this important marine predator across the world's oceans.
This study explores the diet of one of the world's most recognizable predators, the white shark. Dietary assessments are performed by genomic analysis of cloacal swabs collected from approximately 200 live sharks. Findings from this study provide insights into the trophic ecology and feeding behavior of the white shark and key marine resources supporting shark populations. |
doi_str_mv | 10.1002/edn3.454 |
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This study explores the diet of one of the world's most recognizable predators, the white shark. Dietary assessments are performed by genomic analysis of cloacal swabs collected from approximately 200 live sharks. Findings from this study provide insights into the trophic ecology and feeding behavior of the white shark and key marine resources supporting shark populations.</description><identifier>ISSN: 2637-4943</identifier><identifier>EISSN: 2637-4943</identifier><identifier>DOI: 10.1002/edn3.454</identifier><language>eng</language><publisher>Hoboken: John Wiley & Sons, Inc</publisher><subject>Assessments ; Biodiversity ; Birds ; Carcharodon carcharias ; Commercial fishing ; Diet ; diet and trophic ecology ; DNA ; DNA barcoding ; DNA metabarcoding ; Ecology ; Ecosystem biology ; Ecosystems ; Environmental changes ; environmental resilience ; Fish populations ; Fishes ; Fishing ; Genetic analysis ; Genomic analysis ; Juveniles ; Lamnidae ; Marine environment ; Marine mammals ; Marine resources ; Oceans ; Population decline ; Populations ; Predation ; Predators ; Predatory behavior ; Prey ; Protection and preservation ; Resilience ; Sharks ; Southeastern Australia ; Statistical analysis ; Taxonomy ; Trophic relationships ; Wildlife conservation</subject><ispartof>Environmental DNA, 2023-11, Vol.5 (6), p.1362-1377</ispartof><rights>2023 The Authors. published by John Wiley & Sons Ltd.</rights><rights>COPYRIGHT 2023 John Wiley & Sons, Inc.</rights><rights>2023. This work is published under http://creativecommons.org/licenses/by/4.0/ (the “License”). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License.</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c3664-40e4223fa41310d08e25306b25a85e9676910aeb4962a9189ea82b8684752fd23</citedby><cites>FETCH-LOGICAL-c3664-40e4223fa41310d08e25306b25a85e9676910aeb4962a9189ea82b8684752fd23</cites><orcidid>0000-0003-3285-7482 ; 0000-0002-2244-9373 ; 0000-0003-2099-0462 ; 0000-0001-7338-6037 ; 0000-0002-1632-7206 ; 0000-0003-3081-135X</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://onlinelibrary.wiley.com/doi/pdf/10.1002%2Fedn3.454$$EPDF$$P50$$Gwiley$$Hfree_for_read</linktopdf><linktohtml>$$Uhttps://onlinelibrary.wiley.com/doi/full/10.1002%2Fedn3.454$$EHTML$$P50$$Gwiley$$Hfree_for_read</linktohtml><link.rule.ids>314,780,784,864,1416,11560,27922,27923,45572,45573,46050,46474</link.rule.ids></links><search><creatorcontrib>Clark, Zach S. R.</creatorcontrib><creatorcontrib>Fish, Jessica J.</creatorcontrib><creatorcontrib>Butcher, Paul A.</creatorcontrib><creatorcontrib>Holland, Owen J.</creatorcontrib><creatorcontrib>Sherman, Craig D. H.</creatorcontrib><creatorcontrib>Rizzari, Justin</creatorcontrib><creatorcontrib>Weeks, Andrew R.</creatorcontrib><creatorcontrib>Miller, Adam D.</creatorcontrib><title>Insights into the diet and trophic ecology of white sharks (Carcharodon carcharias) gained through DNA metabarcoding analyses of cloacal swabs</title><title>Environmental DNA</title><description>The white shark (Carcharodon carcharias) is one of the world's largest apex predators found throughout the world's temperate and subtropical marine environments. However, the species has suffered significant declines in recent decades and effective conservation programs require a sound knowledge of white shark biology and ecology. In particular, information on white shark diet across life stages and the species' range is needed to identify critical trophic interactions supporting shark populations and to predict the resilience of white sharks to environmental changes. In this study, we reassess the diet and trophic ecology of white sharks via the genetic analyses of cloacal swabs from 214 juvenile and subadult sharks from eastern Australia. Our findings are largely consistent with those of previous studies based on visual analyses of gut contents but highlight the unprecedented taxonomic resolution of prey items offered by genomic assessments of shark cloacal swabs. Diets consisted primarily of ray‐finned fishes, with Mugiliformes, Carangiformes, Perciformes, and Scombriformes being dominant prey taxa, but with elasmobranchs, marine mammals, and birds also being common dietary constituents. Statistical analyses revealed a significant effect of sex and sampling location on diet composition, indicating biological and spatial variability in diets and predatory behavior. Overall, these findings support the notion that juvenile and subadult white sharks are opportunistic predators, which may provide some level of resilience to shifts in marine resources. However, frequently consumed ray‐finned fishes, many of which are commercially targeted, may be key to supporting white shark populations in eastern Australia. This study represents the most comprehensive analysis of juvenile and subadult white shark diets performed to date and provides added confidence in the genomic analysis of cloacal swabs for dietary assessments of predatory species. These results are expected to help inform management geared toward conserving this important marine predator across the world's oceans.
This study explores the diet of one of the world's most recognizable predators, the white shark. Dietary assessments are performed by genomic analysis of cloacal swabs collected from approximately 200 live sharks. Findings from this study provide insights into the trophic ecology and feeding behavior of the white shark and key marine resources supporting shark populations.</description><subject>Assessments</subject><subject>Biodiversity</subject><subject>Birds</subject><subject>Carcharodon carcharias</subject><subject>Commercial fishing</subject><subject>Diet</subject><subject>diet and trophic ecology</subject><subject>DNA</subject><subject>DNA barcoding</subject><subject>DNA metabarcoding</subject><subject>Ecology</subject><subject>Ecosystem biology</subject><subject>Ecosystems</subject><subject>Environmental changes</subject><subject>environmental resilience</subject><subject>Fish populations</subject><subject>Fishes</subject><subject>Fishing</subject><subject>Genetic analysis</subject><subject>Genomic analysis</subject><subject>Juveniles</subject><subject>Lamnidae</subject><subject>Marine environment</subject><subject>Marine mammals</subject><subject>Marine resources</subject><subject>Oceans</subject><subject>Population decline</subject><subject>Populations</subject><subject>Predation</subject><subject>Predators</subject><subject>Predatory behavior</subject><subject>Prey</subject><subject>Protection and preservation</subject><subject>Resilience</subject><subject>Sharks</subject><subject>Southeastern Australia</subject><subject>Statistical analysis</subject><subject>Taxonomy</subject><subject>Trophic relationships</subject><subject>Wildlife conservation</subject><issn>2637-4943</issn><issn>2637-4943</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2023</creationdate><recordtype>article</recordtype><sourceid>24P</sourceid><sourceid>WIN</sourceid><sourceid>ABUWG</sourceid><sourceid>AFKRA</sourceid><sourceid>AZQEC</sourceid><sourceid>BENPR</sourceid><sourceid>CCPQU</sourceid><sourceid>DWQXO</sourceid><sourceid>GNUQQ</sourceid><recordid>eNp1kc1q3DAUhU1poSEJ9BEE3aQLT_VnWV4Ok7QNhHTTrsW1fG0r9UhTScMwL5FnrgZ30U1X93D5zuHAqaoPjG4YpfwzDl5sZCPfVFdcibaWnRRv_9Hvq9uUXmhBWcuoYFfV66NPbppzIs7nQPKMZHCYCfiB5BgOs7MEbVjCdCZhJKfZZSRphvgrkbsdRFtkGIIndtUO0icygfNY_HMMx2km989bsscMfUHC4PxU0mE5J0yXSLsEsLCQdII-3VTvRlgS3v6919XPLw8_dt_qp-9fH3fbp9oKpWQtKUrOxQiSCUYHqpE3gqqeN6Ab7FSrOkYBe9kpDh3THYLmvVZatg0fBy6uq49r7iGG30dM2byEYyytkuGF50q2ShVqs1ITLGicH0OOpauFAffOBo-jK_9t27VNp3Wri-FuNdgYUoo4mkN0e4hnw6i5LGQuC5myUEHrFT2VjPN_OfNw_ywu_B-2I5FG</recordid><startdate>202311</startdate><enddate>202311</enddate><creator>Clark, Zach S. 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R. ; Fish, Jessica J. ; Butcher, Paul A. ; Holland, Owen J. ; Sherman, Craig D. 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R.</au><au>Fish, Jessica J.</au><au>Butcher, Paul A.</au><au>Holland, Owen J.</au><au>Sherman, Craig D. H.</au><au>Rizzari, Justin</au><au>Weeks, Andrew R.</au><au>Miller, Adam D.</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Insights into the diet and trophic ecology of white sharks (Carcharodon carcharias) gained through DNA metabarcoding analyses of cloacal swabs</atitle><jtitle>Environmental DNA</jtitle><date>2023-11</date><risdate>2023</risdate><volume>5</volume><issue>6</issue><spage>1362</spage><epage>1377</epage><pages>1362-1377</pages><issn>2637-4943</issn><eissn>2637-4943</eissn><abstract>The white shark (Carcharodon carcharias) is one of the world's largest apex predators found throughout the world's temperate and subtropical marine environments. However, the species has suffered significant declines in recent decades and effective conservation programs require a sound knowledge of white shark biology and ecology. In particular, information on white shark diet across life stages and the species' range is needed to identify critical trophic interactions supporting shark populations and to predict the resilience of white sharks to environmental changes. In this study, we reassess the diet and trophic ecology of white sharks via the genetic analyses of cloacal swabs from 214 juvenile and subadult sharks from eastern Australia. Our findings are largely consistent with those of previous studies based on visual analyses of gut contents but highlight the unprecedented taxonomic resolution of prey items offered by genomic assessments of shark cloacal swabs. Diets consisted primarily of ray‐finned fishes, with Mugiliformes, Carangiformes, Perciformes, and Scombriformes being dominant prey taxa, but with elasmobranchs, marine mammals, and birds also being common dietary constituents. Statistical analyses revealed a significant effect of sex and sampling location on diet composition, indicating biological and spatial variability in diets and predatory behavior. Overall, these findings support the notion that juvenile and subadult white sharks are opportunistic predators, which may provide some level of resilience to shifts in marine resources. However, frequently consumed ray‐finned fishes, many of which are commercially targeted, may be key to supporting white shark populations in eastern Australia. This study represents the most comprehensive analysis of juvenile and subadult white shark diets performed to date and provides added confidence in the genomic analysis of cloacal swabs for dietary assessments of predatory species. These results are expected to help inform management geared toward conserving this important marine predator across the world's oceans.
This study explores the diet of one of the world's most recognizable predators, the white shark. Dietary assessments are performed by genomic analysis of cloacal swabs collected from approximately 200 live sharks. Findings from this study provide insights into the trophic ecology and feeding behavior of the white shark and key marine resources supporting shark populations.</abstract><cop>Hoboken</cop><pub>John Wiley & Sons, Inc</pub><doi>10.1002/edn3.454</doi><tpages>16</tpages><orcidid>https://orcid.org/0000-0003-3285-7482</orcidid><orcidid>https://orcid.org/0000-0002-2244-9373</orcidid><orcidid>https://orcid.org/0000-0003-2099-0462</orcidid><orcidid>https://orcid.org/0000-0001-7338-6037</orcidid><orcidid>https://orcid.org/0000-0002-1632-7206</orcidid><orcidid>https://orcid.org/0000-0003-3081-135X</orcidid><oa>free_for_read</oa></addata></record> |
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subjects | Assessments Biodiversity Birds Carcharodon carcharias Commercial fishing Diet diet and trophic ecology DNA DNA barcoding DNA metabarcoding Ecology Ecosystem biology Ecosystems Environmental changes environmental resilience Fish populations Fishes Fishing Genetic analysis Genomic analysis Juveniles Lamnidae Marine environment Marine mammals Marine resources Oceans Population decline Populations Predation Predators Predatory behavior Prey Protection and preservation Resilience Sharks Southeastern Australia Statistical analysis Taxonomy Trophic relationships Wildlife conservation |
title | Insights into the diet and trophic ecology of white sharks (Carcharodon carcharias) gained through DNA metabarcoding analyses of cloacal swabs |
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