Insights into the diet and trophic ecology of white sharks (Carcharodon carcharias) gained through DNA metabarcoding analyses of cloacal swabs

The white shark (Carcharodon carcharias) is one of the world's largest apex predators found throughout the world's temperate and subtropical marine environments. However, the species has suffered significant declines in recent decades and effective conservation programs require a sound kno...

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Veröffentlicht in:Environmental DNA 2023-11, Vol.5 (6), p.1362-1377
Hauptverfasser: Clark, Zach S. R., Fish, Jessica J., Butcher, Paul A., Holland, Owen J., Sherman, Craig D. H., Rizzari, Justin, Weeks, Andrew R., Miller, Adam D.
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container_end_page 1377
container_issue 6
container_start_page 1362
container_title Environmental DNA
container_volume 5
creator Clark, Zach S. R.
Fish, Jessica J.
Butcher, Paul A.
Holland, Owen J.
Sherman, Craig D. H.
Rizzari, Justin
Weeks, Andrew R.
Miller, Adam D.
description The white shark (Carcharodon carcharias) is one of the world's largest apex predators found throughout the world's temperate and subtropical marine environments. However, the species has suffered significant declines in recent decades and effective conservation programs require a sound knowledge of white shark biology and ecology. In particular, information on white shark diet across life stages and the species' range is needed to identify critical trophic interactions supporting shark populations and to predict the resilience of white sharks to environmental changes. In this study, we reassess the diet and trophic ecology of white sharks via the genetic analyses of cloacal swabs from 214 juvenile and subadult sharks from eastern Australia. Our findings are largely consistent with those of previous studies based on visual analyses of gut contents but highlight the unprecedented taxonomic resolution of prey items offered by genomic assessments of shark cloacal swabs. Diets consisted primarily of ray‐finned fishes, with Mugiliformes, Carangiformes, Perciformes, and Scombriformes being dominant prey taxa, but with elasmobranchs, marine mammals, and birds also being common dietary constituents. Statistical analyses revealed a significant effect of sex and sampling location on diet composition, indicating biological and spatial variability in diets and predatory behavior. Overall, these findings support the notion that juvenile and subadult white sharks are opportunistic predators, which may provide some level of resilience to shifts in marine resources. However, frequently consumed ray‐finned fishes, many of which are commercially targeted, may be key to supporting white shark populations in eastern Australia. This study represents the most comprehensive analysis of juvenile and subadult white shark diets performed to date and provides added confidence in the genomic analysis of cloacal swabs for dietary assessments of predatory species. These results are expected to help inform management geared toward conserving this important marine predator across the world's oceans. This study explores the diet of one of the world's most recognizable predators, the white shark. Dietary assessments are performed by genomic analysis of cloacal swabs collected from approximately 200 live sharks. Findings from this study provide insights into the trophic ecology and feeding behavior of the white shark and key marine resources supporting shark populations.
doi_str_mv 10.1002/edn3.454
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R. ; Fish, Jessica J. ; Butcher, Paul A. ; Holland, Owen J. ; Sherman, Craig D. H. ; Rizzari, Justin ; Weeks, Andrew R. ; Miller, Adam D.</creator><creatorcontrib>Clark, Zach S. R. ; Fish, Jessica J. ; Butcher, Paul A. ; Holland, Owen J. ; Sherman, Craig D. H. ; Rizzari, Justin ; Weeks, Andrew R. ; Miller, Adam D.</creatorcontrib><description>The white shark (Carcharodon carcharias) is one of the world's largest apex predators found throughout the world's temperate and subtropical marine environments. However, the species has suffered significant declines in recent decades and effective conservation programs require a sound knowledge of white shark biology and ecology. In particular, information on white shark diet across life stages and the species' range is needed to identify critical trophic interactions supporting shark populations and to predict the resilience of white sharks to environmental changes. In this study, we reassess the diet and trophic ecology of white sharks via the genetic analyses of cloacal swabs from 214 juvenile and subadult sharks from eastern Australia. Our findings are largely consistent with those of previous studies based on visual analyses of gut contents but highlight the unprecedented taxonomic resolution of prey items offered by genomic assessments of shark cloacal swabs. Diets consisted primarily of ray‐finned fishes, with Mugiliformes, Carangiformes, Perciformes, and Scombriformes being dominant prey taxa, but with elasmobranchs, marine mammals, and birds also being common dietary constituents. Statistical analyses revealed a significant effect of sex and sampling location on diet composition, indicating biological and spatial variability in diets and predatory behavior. Overall, these findings support the notion that juvenile and subadult white sharks are opportunistic predators, which may provide some level of resilience to shifts in marine resources. However, frequently consumed ray‐finned fishes, many of which are commercially targeted, may be key to supporting white shark populations in eastern Australia. This study represents the most comprehensive analysis of juvenile and subadult white shark diets performed to date and provides added confidence in the genomic analysis of cloacal swabs for dietary assessments of predatory species. These results are expected to help inform management geared toward conserving this important marine predator across the world's oceans. This study explores the diet of one of the world's most recognizable predators, the white shark. Dietary assessments are performed by genomic analysis of cloacal swabs collected from approximately 200 live sharks. 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subjects Assessments
Biodiversity
Birds
Carcharodon carcharias
Commercial fishing
Diet
diet and trophic ecology
DNA
DNA barcoding
DNA metabarcoding
Ecology
Ecosystem biology
Ecosystems
Environmental changes
environmental resilience
Fish populations
Fishes
Fishing
Genetic analysis
Genomic analysis
Juveniles
Lamnidae
Marine environment
Marine mammals
Marine resources
Oceans
Population decline
Populations
Predation
Predators
Predatory behavior
Prey
Protection and preservation
Resilience
Sharks
Southeastern Australia
Statistical analysis
Taxonomy
Trophic relationships
Wildlife conservation
title Insights into the diet and trophic ecology of white sharks (Carcharodon carcharias) gained through DNA metabarcoding analyses of cloacal swabs
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