In silico analyses of betulin: DFT studies, corrosion inhibition properties, ADMET prediction, and molecular docking with a series of SARS-CoV-2 and monkeypox proteins

We report detailed computational studies of betulin — a pentacyclic naturally occuring triterpene, which is a precursor for a broad family of biologically active derivatives. The structure, electronic, and optical properties of betulin were studied by the density functional theory (DFT) calculations...

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Veröffentlicht in:Structural chemistry 2023-08, Vol.34 (4), p.1545-1556
Hauptverfasser: Burkhanova, Tatyana M., Krysantieva, Alena I., Babashkina, Maria G., Konyaeva, Irina A., Monina, Lyudmila N., Goncharenko, Anastasiya N., Safin, Damir A.
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container_issue 4
container_start_page 1545
container_title Structural chemistry
container_volume 34
creator Burkhanova, Tatyana M.
Krysantieva, Alena I.
Babashkina, Maria G.
Konyaeva, Irina A.
Monina, Lyudmila N.
Goncharenko, Anastasiya N.
Safin, Damir A.
description We report detailed computational studies of betulin — a pentacyclic naturally occuring triterpene, which is a precursor for a broad family of biologically active derivatives. The structure, electronic, and optical properties of betulin were studied by the density functional theory (DFT) calculations in gas phase. The reactivity and the reactive centers of betulin were revealed through its global reactivity descriptors and molecular electrostatic potential (MEP). The DFT calculations were also applied to probe betulin as a potential corrosion inhibitor for some important metals used in implants. Electron charge transfer from the molecule of betulin to the surface of all the examined metals (Ti, Fe, Zr, Co, Cu, Cr, Ni, Mn, Mo, Zn, Al, W, Ag, Au) was revealed, of which the best results were obtained for Ni, Au and Co. Bioavailability, druggability as well as absorption, distribution, metabolism, excretion and toxicity (ADMET) properties of betulin were evaluated using the SwissADME, BOILED-Egg and ProTox-II tools. Molecular docking was applied to examine the influence of the title compound on a series of the SARS-CoV-2 proteins as well as one of the monkeypox proteins. It was established that betulin is active against all the applied proteins with the best binding affinity with papain-like protease (PLpro) and spike protein (native) of SARS-CoV-2. The title compound is also active against the studied monkeypox protein. Interaction of betulin with papain-like protease (PLpro) was studied using molecular dynamics simulations.
doi_str_mv 10.1007/s11224-022-02079-8
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subjects Aluminum
Analysis
Bioavailability
Charge transfer
Chemical inhibitors
Chemistry
Chemistry and Materials Science
Chromium
Computer Applications in Chemistry
Copper
Corrosion and anti-corrosives
Corrosion inhibitors
Corrosion potential
Density functional theory
Density functionals
Electron transport
Health aspects
Human monkeypox
Iron
Manganese
Mathematical analysis
Molecular docking
Molecular dynamics
Molybdenum
Mpox
Nickel
Optical properties
Original Research
Papain
Physical Chemistry
Protease
Protein binding
Proteins
Severe acute respiratory syndrome coronavirus 2
Theoretical and Computational Chemistry
Titanium
Toxicity
Tungsten
Vapor phases
Zirconium
title In silico analyses of betulin: DFT studies, corrosion inhibition properties, ADMET prediction, and molecular docking with a series of SARS-CoV-2 and monkeypox proteins
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