How to Capture Thousands of Genotypes—Initiation of Somatic Embryogenesis in Norway Spruce
Somatic embryogenesis (SE) is considered the most effective method for vegetative propagation of Norway spruce (Picea abies L. Karst). When the aim is commercial production, the process needs scaling up. This includes many initiations to increase the number of available genotypes in the cryo-bank. N...
Gespeichert in:
Veröffentlicht in: | Forests 2023-04, Vol.14 (4), p.810 |
---|---|
Hauptverfasser: | , , , |
Format: | Artikel |
Sprache: | eng |
Schlagworte: | |
Online-Zugang: | Volltext |
Tags: |
Tag hinzufügen
Keine Tags, Fügen Sie den ersten Tag hinzu!
|
container_end_page | |
---|---|
container_issue | 4 |
container_start_page | 810 |
container_title | Forests |
container_volume | 14 |
creator | Varis, Saila Tikkinen, Mikko Edesi, Jaanika Aronen, Tuija |
description | Somatic embryogenesis (SE) is considered the most effective method for vegetative propagation of Norway spruce (Picea abies L. Karst). When the aim is commercial production, the process needs scaling up. This includes many initiations to increase the number of available genotypes in the cryo-bank. Numerous genotypes are needed to maintain genetic diversity in reforestation and, at the same time, are a prerequisite for the efficient improvement of breeding traits. Norway spruce is also highly susceptible to Heterobasidion root rot. We analysed the data from the SE initiations of Norway spruce from six different years, including a total of 126 families and almost 13,000 initiations, and used several genetic (including allele PaLAR3B improving Heterobasidion resistance), environmental, and operational variables to explain the initiation success and the number of cryopreserved embryogenic tissue (ET). Overall, the cone collection date was the best and most comprehensive single variable for predicting the initiation success and the number of cryopreserved ET in the logistic regression models. PaLAR3B allele did not interfere with SE initiation or the cryopreservation. In the optimal scenario, according to the current data, Norway spruce cones would be collected in southern Finland during the first two weeks of July (in approximately 800 d.d. accumulation) from the seed orchard or greenhouse and delivered quickly to the laboratory, and the cones would be cold-stored for five days or less before initiations on mLM media. Lower initiation frequencies in some families can be compensated by increasing the number of explants—however, taking operational limitations into account. |
doi_str_mv | 10.3390/f14040810 |
format | Article |
fullrecord | <record><control><sourceid>gale_proqu</sourceid><recordid>TN_cdi_proquest_journals_2806522012</recordid><sourceformat>XML</sourceformat><sourcesystem>PC</sourcesystem><galeid>A747444859</galeid><sourcerecordid>A747444859</sourcerecordid><originalsourceid>FETCH-LOGICAL-c331t-db8468aa4028a5fc3ad8b3093682a72da276cb21769bfa18dbff3dbddafa7f753</originalsourceid><addsrcrecordid>eNpNUE1LAzEQXUTBoj34DwKePFTztZvkWIq2haKH1puwzG6SGrHJmuxS9uaP8Bf6S9xSEWcO85h57w28LLsi-JYxhe8s4ZhjSfBJNiJKqQlXWJz-w-fZOKU3PFQupKJ8lL0swh61Ac2gabto0OY1dAm8TihYNDc-tH1j0vfn19K71kHrgj9c1mE34Brd76rYh63xJrmEnEePIe6hR-smdrW5zM4svCcz_p0X2fPD_Wa2mKye5svZdDWpGSPtRFeSFxKAYyohtzUDLSuGFSskBUE1UFHUFSWiUJUFInVlLdOV1mBBWJGzi-z66NvE8NGZ1JZvoYt-eFlSiYucUkzowLo9srbwbkrnbWgj1ENrs3N18Ma6YT8VXHDOZa4Gwc1RUMeQUjS2bKLbQexLgstD4OVf4OwHixRz9Q</addsrcrecordid><sourcetype>Aggregation Database</sourcetype><iscdi>true</iscdi><recordtype>article</recordtype><pqid>2806522012</pqid></control><display><type>article</type><title>How to Capture Thousands of Genotypes—Initiation of Somatic Embryogenesis in Norway Spruce</title><source>MDPI - Multidisciplinary Digital Publishing Institute</source><source>EZB-FREE-00999 freely available EZB journals</source><creator>Varis, Saila ; Tikkinen, Mikko ; Edesi, Jaanika ; Aronen, Tuija</creator><creatorcontrib>Varis, Saila ; Tikkinen, Mikko ; Edesi, Jaanika ; Aronen, Tuija</creatorcontrib><description>Somatic embryogenesis (SE) is considered the most effective method for vegetative propagation of Norway spruce (Picea abies L. Karst). When the aim is commercial production, the process needs scaling up. This includes many initiations to increase the number of available genotypes in the cryo-bank. Numerous genotypes are needed to maintain genetic diversity in reforestation and, at the same time, are a prerequisite for the efficient improvement of breeding traits. Norway spruce is also highly susceptible to Heterobasidion root rot. We analysed the data from the SE initiations of Norway spruce from six different years, including a total of 126 families and almost 13,000 initiations, and used several genetic (including allele PaLAR3B improving Heterobasidion resistance), environmental, and operational variables to explain the initiation success and the number of cryopreserved embryogenic tissue (ET). Overall, the cone collection date was the best and most comprehensive single variable for predicting the initiation success and the number of cryopreserved ET in the logistic regression models. PaLAR3B allele did not interfere with SE initiation or the cryopreservation. In the optimal scenario, according to the current data, Norway spruce cones would be collected in southern Finland during the first two weeks of July (in approximately 800 d.d. accumulation) from the seed orchard or greenhouse and delivered quickly to the laboratory, and the cones would be cold-stored for five days or less before initiations on mLM media. Lower initiation frequencies in some families can be compensated by increasing the number of explants—however, taking operational limitations into account.</description><identifier>ISSN: 1999-4907</identifier><identifier>EISSN: 1999-4907</identifier><identifier>DOI: 10.3390/f14040810</identifier><language>eng</language><publisher>Basel: MDPI AG</publisher><subject>Alleles ; Cold ; Cold storage ; Cones ; Cryopreservation ; Embryonic development ; Embryonic growth stage ; Embryos ; Explants ; Families & family life ; Field study ; Forestry research ; Genetic diversity ; Genotypes ; Heterobasidion ; Karst ; Physiological aspects ; Picea abies ; Pine trees ; Plant growth ; Plant propagation ; Propagation ; Reforestation ; Regression analysis ; Regression models ; Root rot ; Seed orchards ; Seeds ; Somatic cells ; Somatic embryogenesis ; Spruce ; Surfactants ; Trees</subject><ispartof>Forests, 2023-04, Vol.14 (4), p.810</ispartof><rights>COPYRIGHT 2023 MDPI AG</rights><rights>2023 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License.</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c331t-db8468aa4028a5fc3ad8b3093682a72da276cb21769bfa18dbff3dbddafa7f753</citedby><cites>FETCH-LOGICAL-c331t-db8468aa4028a5fc3ad8b3093682a72da276cb21769bfa18dbff3dbddafa7f753</cites><orcidid>0000-0002-2368-8042 ; 0000-0003-1223-3015 ; 0000-0001-5442-5002 ; 0000-0002-9563-9602</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,776,780,27901,27902</link.rule.ids></links><search><creatorcontrib>Varis, Saila</creatorcontrib><creatorcontrib>Tikkinen, Mikko</creatorcontrib><creatorcontrib>Edesi, Jaanika</creatorcontrib><creatorcontrib>Aronen, Tuija</creatorcontrib><title>How to Capture Thousands of Genotypes—Initiation of Somatic Embryogenesis in Norway Spruce</title><title>Forests</title><description>Somatic embryogenesis (SE) is considered the most effective method for vegetative propagation of Norway spruce (Picea abies L. Karst). When the aim is commercial production, the process needs scaling up. This includes many initiations to increase the number of available genotypes in the cryo-bank. Numerous genotypes are needed to maintain genetic diversity in reforestation and, at the same time, are a prerequisite for the efficient improvement of breeding traits. Norway spruce is also highly susceptible to Heterobasidion root rot. We analysed the data from the SE initiations of Norway spruce from six different years, including a total of 126 families and almost 13,000 initiations, and used several genetic (including allele PaLAR3B improving Heterobasidion resistance), environmental, and operational variables to explain the initiation success and the number of cryopreserved embryogenic tissue (ET). Overall, the cone collection date was the best and most comprehensive single variable for predicting the initiation success and the number of cryopreserved ET in the logistic regression models. PaLAR3B allele did not interfere with SE initiation or the cryopreservation. In the optimal scenario, according to the current data, Norway spruce cones would be collected in southern Finland during the first two weeks of July (in approximately 800 d.d. accumulation) from the seed orchard or greenhouse and delivered quickly to the laboratory, and the cones would be cold-stored for five days or less before initiations on mLM media. Lower initiation frequencies in some families can be compensated by increasing the number of explants—however, taking operational limitations into account.</description><subject>Alleles</subject><subject>Cold</subject><subject>Cold storage</subject><subject>Cones</subject><subject>Cryopreservation</subject><subject>Embryonic development</subject><subject>Embryonic growth stage</subject><subject>Embryos</subject><subject>Explants</subject><subject>Families & family life</subject><subject>Field study</subject><subject>Forestry research</subject><subject>Genetic diversity</subject><subject>Genotypes</subject><subject>Heterobasidion</subject><subject>Karst</subject><subject>Physiological aspects</subject><subject>Picea abies</subject><subject>Pine trees</subject><subject>Plant growth</subject><subject>Plant propagation</subject><subject>Propagation</subject><subject>Reforestation</subject><subject>Regression analysis</subject><subject>Regression models</subject><subject>Root rot</subject><subject>Seed orchards</subject><subject>Seeds</subject><subject>Somatic cells</subject><subject>Somatic embryogenesis</subject><subject>Spruce</subject><subject>Surfactants</subject><subject>Trees</subject><issn>1999-4907</issn><issn>1999-4907</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2023</creationdate><recordtype>article</recordtype><sourceid>BENPR</sourceid><recordid>eNpNUE1LAzEQXUTBoj34DwKePFTztZvkWIq2haKH1puwzG6SGrHJmuxS9uaP8Bf6S9xSEWcO85h57w28LLsi-JYxhe8s4ZhjSfBJNiJKqQlXWJz-w-fZOKU3PFQupKJ8lL0swh61Ac2gabto0OY1dAm8TihYNDc-tH1j0vfn19K71kHrgj9c1mE34Brd76rYh63xJrmEnEePIe6hR-smdrW5zM4svCcz_p0X2fPD_Wa2mKye5svZdDWpGSPtRFeSFxKAYyohtzUDLSuGFSskBUE1UFHUFSWiUJUFInVlLdOV1mBBWJGzi-z66NvE8NGZ1JZvoYt-eFlSiYucUkzowLo9srbwbkrnbWgj1ENrs3N18Ma6YT8VXHDOZa4Gwc1RUMeQUjS2bKLbQexLgstD4OVf4OwHixRz9Q</recordid><startdate>20230401</startdate><enddate>20230401</enddate><creator>Varis, Saila</creator><creator>Tikkinen, Mikko</creator><creator>Edesi, Jaanika</creator><creator>Aronen, Tuija</creator><general>MDPI AG</general><scope>AAYXX</scope><scope>CITATION</scope><scope>3V.</scope><scope>7SN</scope><scope>7SS</scope><scope>7X2</scope><scope>8FE</scope><scope>8FH</scope><scope>8FK</scope><scope>ABUWG</scope><scope>AEUYN</scope><scope>AFKRA</scope><scope>ATCPS</scope><scope>AZQEC</scope><scope>BENPR</scope><scope>BHPHI</scope><scope>BKSAR</scope><scope>C1K</scope><scope>CCPQU</scope><scope>DWQXO</scope><scope>GNUQQ</scope><scope>HCIFZ</scope><scope>M0K</scope><scope>PATMY</scope><scope>PCBAR</scope><scope>PIMPY</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>PRINS</scope><scope>PYCSY</scope><orcidid>https://orcid.org/0000-0002-2368-8042</orcidid><orcidid>https://orcid.org/0000-0003-1223-3015</orcidid><orcidid>https://orcid.org/0000-0001-5442-5002</orcidid><orcidid>https://orcid.org/0000-0002-9563-9602</orcidid></search><sort><creationdate>20230401</creationdate><title>How to Capture Thousands of Genotypes—Initiation of Somatic Embryogenesis in Norway Spruce</title><author>Varis, Saila ; Tikkinen, Mikko ; Edesi, Jaanika ; Aronen, Tuija</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c331t-db8468aa4028a5fc3ad8b3093682a72da276cb21769bfa18dbff3dbddafa7f753</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2023</creationdate><topic>Alleles</topic><topic>Cold</topic><topic>Cold storage</topic><topic>Cones</topic><topic>Cryopreservation</topic><topic>Embryonic development</topic><topic>Embryonic growth stage</topic><topic>Embryos</topic><topic>Explants</topic><topic>Families & family life</topic><topic>Field study</topic><topic>Forestry research</topic><topic>Genetic diversity</topic><topic>Genotypes</topic><topic>Heterobasidion</topic><topic>Karst</topic><topic>Physiological aspects</topic><topic>Picea abies</topic><topic>Pine trees</topic><topic>Plant growth</topic><topic>Plant propagation</topic><topic>Propagation</topic><topic>Reforestation</topic><topic>Regression analysis</topic><topic>Regression models</topic><topic>Root rot</topic><topic>Seed orchards</topic><topic>Seeds</topic><topic>Somatic cells</topic><topic>Somatic embryogenesis</topic><topic>Spruce</topic><topic>Surfactants</topic><topic>Trees</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Varis, Saila</creatorcontrib><creatorcontrib>Tikkinen, Mikko</creatorcontrib><creatorcontrib>Edesi, Jaanika</creatorcontrib><creatorcontrib>Aronen, Tuija</creatorcontrib><collection>CrossRef</collection><collection>ProQuest Central (Corporate)</collection><collection>Ecology Abstracts</collection><collection>Entomology Abstracts (Full archive)</collection><collection>Agricultural Science Collection</collection><collection>ProQuest SciTech Collection</collection><collection>ProQuest Natural Science Collection</collection><collection>ProQuest Central (Alumni) (purchase pre-March 2016)</collection><collection>ProQuest Central (Alumni Edition)</collection><collection>ProQuest One Sustainability</collection><collection>ProQuest Central UK/Ireland</collection><collection>Agricultural & Environmental Science Collection</collection><collection>ProQuest Central Essentials</collection><collection>ProQuest Central</collection><collection>Natural Science Collection</collection><collection>Earth, Atmospheric & Aquatic Science Collection</collection><collection>Environmental Sciences and Pollution Management</collection><collection>ProQuest One Community College</collection><collection>ProQuest Central Korea</collection><collection>ProQuest Central Student</collection><collection>SciTech Premium Collection</collection><collection>Agricultural Science Database</collection><collection>Environmental Science Database</collection><collection>Earth, Atmospheric & Aquatic Science Database</collection><collection>Publicly Available Content Database</collection><collection>ProQuest One Academic Eastern Edition (DO NOT USE)</collection><collection>ProQuest One Academic</collection><collection>ProQuest One Academic UKI Edition</collection><collection>ProQuest Central China</collection><collection>Environmental Science Collection</collection><jtitle>Forests</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Varis, Saila</au><au>Tikkinen, Mikko</au><au>Edesi, Jaanika</au><au>Aronen, Tuija</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>How to Capture Thousands of Genotypes—Initiation of Somatic Embryogenesis in Norway Spruce</atitle><jtitle>Forests</jtitle><date>2023-04-01</date><risdate>2023</risdate><volume>14</volume><issue>4</issue><spage>810</spage><pages>810-</pages><issn>1999-4907</issn><eissn>1999-4907</eissn><abstract>Somatic embryogenesis (SE) is considered the most effective method for vegetative propagation of Norway spruce (Picea abies L. Karst). When the aim is commercial production, the process needs scaling up. This includes many initiations to increase the number of available genotypes in the cryo-bank. Numerous genotypes are needed to maintain genetic diversity in reforestation and, at the same time, are a prerequisite for the efficient improvement of breeding traits. Norway spruce is also highly susceptible to Heterobasidion root rot. We analysed the data from the SE initiations of Norway spruce from six different years, including a total of 126 families and almost 13,000 initiations, and used several genetic (including allele PaLAR3B improving Heterobasidion resistance), environmental, and operational variables to explain the initiation success and the number of cryopreserved embryogenic tissue (ET). Overall, the cone collection date was the best and most comprehensive single variable for predicting the initiation success and the number of cryopreserved ET in the logistic regression models. PaLAR3B allele did not interfere with SE initiation or the cryopreservation. In the optimal scenario, according to the current data, Norway spruce cones would be collected in southern Finland during the first two weeks of July (in approximately 800 d.d. accumulation) from the seed orchard or greenhouse and delivered quickly to the laboratory, and the cones would be cold-stored for five days or less before initiations on mLM media. Lower initiation frequencies in some families can be compensated by increasing the number of explants—however, taking operational limitations into account.</abstract><cop>Basel</cop><pub>MDPI AG</pub><doi>10.3390/f14040810</doi><orcidid>https://orcid.org/0000-0002-2368-8042</orcidid><orcidid>https://orcid.org/0000-0003-1223-3015</orcidid><orcidid>https://orcid.org/0000-0001-5442-5002</orcidid><orcidid>https://orcid.org/0000-0002-9563-9602</orcidid><oa>free_for_read</oa></addata></record> |
fulltext | fulltext |
identifier | ISSN: 1999-4907 |
ispartof | Forests, 2023-04, Vol.14 (4), p.810 |
issn | 1999-4907 1999-4907 |
language | eng |
recordid | cdi_proquest_journals_2806522012 |
source | MDPI - Multidisciplinary Digital Publishing Institute; EZB-FREE-00999 freely available EZB journals |
subjects | Alleles Cold Cold storage Cones Cryopreservation Embryonic development Embryonic growth stage Embryos Explants Families & family life Field study Forestry research Genetic diversity Genotypes Heterobasidion Karst Physiological aspects Picea abies Pine trees Plant growth Plant propagation Propagation Reforestation Regression analysis Regression models Root rot Seed orchards Seeds Somatic cells Somatic embryogenesis Spruce Surfactants Trees |
title | How to Capture Thousands of Genotypes—Initiation of Somatic Embryogenesis in Norway Spruce |
url | https://sfx.bib-bvb.de/sfx_tum?ctx_ver=Z39.88-2004&ctx_enc=info:ofi/enc:UTF-8&ctx_tim=2025-02-04T19%3A52%3A59IST&url_ver=Z39.88-2004&url_ctx_fmt=infofi/fmt:kev:mtx:ctx&rfr_id=info:sid/primo.exlibrisgroup.com:primo3-Article-gale_proqu&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rft.genre=article&rft.atitle=How%20to%20Capture%20Thousands%20of%20Genotypes%E2%80%94Initiation%20of%20Somatic%20Embryogenesis%20in%20Norway%20Spruce&rft.jtitle=Forests&rft.au=Varis,%20Saila&rft.date=2023-04-01&rft.volume=14&rft.issue=4&rft.spage=810&rft.pages=810-&rft.issn=1999-4907&rft.eissn=1999-4907&rft_id=info:doi/10.3390/f14040810&rft_dat=%3Cgale_proqu%3EA747444859%3C/gale_proqu%3E%3Curl%3E%3C/url%3E&disable_directlink=true&sfx.directlink=off&sfx.report_link=0&rft_id=info:oai/&rft_pqid=2806522012&rft_id=info:pmid/&rft_galeid=A747444859&rfr_iscdi=true |