Exploring structural requirements of simple benzene derivatives for adsorption on carbon nanotubes: CoMFA, GRIND, and HQSAR
In this work, three quantitative structure–activity relationship (QSAR) methods involving comparative molecular field analysis (CoMFA) and GRid-INdependent Descriptors (GRIND) based 3D-QSAR and hologram QSAR (HQSAR) were evaluated for predicting adsorption coefficients of the simple benzene derivati...
Gespeichert in:
Veröffentlicht in: | Structural chemistry 2023-04, Vol.34 (2), p.413-424 |
---|---|
Hauptverfasser: | , |
Format: | Artikel |
Sprache: | eng |
Schlagworte: | |
Online-Zugang: | Volltext |
Tags: |
Tag hinzufügen
Keine Tags, Fügen Sie den ersten Tag hinzu!
|
container_end_page | 424 |
---|---|
container_issue | 2 |
container_start_page | 413 |
container_title | Structural chemistry |
container_volume | 34 |
creator | Mansouri, Forough Sarlak, Nahid |
description | In this work, three quantitative structure–activity relationship (QSAR) methods involving comparative molecular field analysis (CoMFA) and GRid-INdependent Descriptors (GRIND) based 3D-QSAR and hologram QSAR (HQSAR) were evaluated for predicting adsorption coefficients of the simple benzene derivatives on mutiwalled carbon nanotubes (MWCNTs). The contour maps of CoMFA suggested that the steric hindrance had a significant impact on the adsorption process of substituted benzenes. GRIND studies investigate the important mutual distances between molecular features, which confirmed the role of hydrophobic groups as well as their distances from different steric hot spots in the benzene ring of the molecules. According to HQSAR model and its fragment contribution map, the hydrogen bond donor and acceptor were also found to play an important role in governing adsorption of substituted benzenes on CNTs. The CoMFA, GRIND, and HQSAR methods employed to build predictive 2D- and 3D-QSAR models for adsorption of simple benzene derivatives on CNTs in aqueous media successfully. |
doi_str_mv | 10.1007/s11224-022-01973-5 |
format | Article |
fullrecord | <record><control><sourceid>gale_proqu</sourceid><recordid>TN_cdi_proquest_journals_2787247179</recordid><sourceformat>XML</sourceformat><sourcesystem>PC</sourcesystem><galeid>A741697693</galeid><sourcerecordid>A741697693</sourcerecordid><originalsourceid>FETCH-LOGICAL-c358t-8d731f109f74e0a0e556a2174d1b95441f76070b9aa61e43f7374cbe3bf65c973</originalsourceid><addsrcrecordid>eNp9kV1LHTEQhhdpQWv7B7wKeOvafG7Oenc4foKtaNvrkN2dSGRPsk6y0tY_b-wK3pVMeIdhnkmYt6oOGD1mlOqviTHOZU05rylrtajVTrXHlOZ1Syn7UHIqaV0u3a0-pfRQiqwRaq96Pvs9jRF9uCcp49znGe1IEB5nj7CFkBOJjiS_nUYgHYS_EIAMgP7JZv8EibiIxA4p4pR9DKREb7ErEmyIee4gnZBN_Ha-PiIXd1ffT4-IDQO5vP2xvvtcfXR2TPDlTferX-dnPzeX9fXNxdVmfV33Qq1yvRq0YI7R1mkJ1FJQqrGcaTmwrlVSMqcbqmnXWtswkMJpoWXfgehco_qyjP3qcJk7YXycIWXzEGcM5UnD9UpzqZluS9fx0nVvRzA-uJjR9uUMsPV9DOB8qa-1ZE2rm1YUgC9AjzElBGcm9FuLfwyj5tUVs7hiiivmnytGFUgsUJpelw74_pf_UC-S648y</addsrcrecordid><sourcetype>Aggregation Database</sourcetype><iscdi>true</iscdi><recordtype>article</recordtype><pqid>2787247179</pqid></control><display><type>article</type><title>Exploring structural requirements of simple benzene derivatives for adsorption on carbon nanotubes: CoMFA, GRIND, and HQSAR</title><source>SpringerNature Journals</source><creator>Mansouri, Forough ; Sarlak, Nahid</creator><creatorcontrib>Mansouri, Forough ; Sarlak, Nahid</creatorcontrib><description>In this work, three quantitative structure–activity relationship (QSAR) methods involving comparative molecular field analysis (CoMFA) and GRid-INdependent Descriptors (GRIND) based 3D-QSAR and hologram QSAR (HQSAR) were evaluated for predicting adsorption coefficients of the simple benzene derivatives on mutiwalled carbon nanotubes (MWCNTs). The contour maps of CoMFA suggested that the steric hindrance had a significant impact on the adsorption process of substituted benzenes. GRIND studies investigate the important mutual distances between molecular features, which confirmed the role of hydrophobic groups as well as their distances from different steric hot spots in the benzene ring of the molecules. According to HQSAR model and its fragment contribution map, the hydrogen bond donor and acceptor were also found to play an important role in governing adsorption of substituted benzenes on CNTs. The CoMFA, GRIND, and HQSAR methods employed to build predictive 2D- and 3D-QSAR models for adsorption of simple benzene derivatives on CNTs in aqueous media successfully.</description><identifier>ISSN: 1040-0400</identifier><identifier>EISSN: 1572-9001</identifier><identifier>DOI: 10.1007/s11224-022-01973-5</identifier><language>eng</language><publisher>New York: Springer US</publisher><subject>Adsorption ; Aqueous solutions ; Benzene ; Chemistry ; Chemistry and Materials Science ; Comparative analysis ; Computer Applications in Chemistry ; Hydrocarbons ; Hydrogen bonds ; Multi wall carbon nanotubes ; Nanotubes ; Original Research ; Physical Chemistry ; Steric hindrance ; Substitutes ; Theoretical and Computational Chemistry ; Three dimensional models</subject><ispartof>Structural chemistry, 2023-04, Vol.34 (2), p.413-424</ispartof><rights>The Author(s), under exclusive licence to Springer Science+Business Media, LLC, part of Springer Nature 2022</rights><rights>COPYRIGHT 2023 Springer</rights><rights>The Author(s), under exclusive licence to Springer Science+Business Media, LLC, part of Springer Nature 2022.</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c358t-8d731f109f74e0a0e556a2174d1b95441f76070b9aa61e43f7374cbe3bf65c973</citedby><cites>FETCH-LOGICAL-c358t-8d731f109f74e0a0e556a2174d1b95441f76070b9aa61e43f7374cbe3bf65c973</cites><orcidid>0000-0002-6833-8636 ; 0000-0002-4203-0967</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://link.springer.com/content/pdf/10.1007/s11224-022-01973-5$$EPDF$$P50$$Gspringer$$H</linktopdf><linktohtml>$$Uhttps://link.springer.com/10.1007/s11224-022-01973-5$$EHTML$$P50$$Gspringer$$H</linktohtml><link.rule.ids>314,780,784,27924,27925,41488,42557,51319</link.rule.ids></links><search><creatorcontrib>Mansouri, Forough</creatorcontrib><creatorcontrib>Sarlak, Nahid</creatorcontrib><title>Exploring structural requirements of simple benzene derivatives for adsorption on carbon nanotubes: CoMFA, GRIND, and HQSAR</title><title>Structural chemistry</title><addtitle>Struct Chem</addtitle><description>In this work, three quantitative structure–activity relationship (QSAR) methods involving comparative molecular field analysis (CoMFA) and GRid-INdependent Descriptors (GRIND) based 3D-QSAR and hologram QSAR (HQSAR) were evaluated for predicting adsorption coefficients of the simple benzene derivatives on mutiwalled carbon nanotubes (MWCNTs). The contour maps of CoMFA suggested that the steric hindrance had a significant impact on the adsorption process of substituted benzenes. GRIND studies investigate the important mutual distances between molecular features, which confirmed the role of hydrophobic groups as well as their distances from different steric hot spots in the benzene ring of the molecules. According to HQSAR model and its fragment contribution map, the hydrogen bond donor and acceptor were also found to play an important role in governing adsorption of substituted benzenes on CNTs. The CoMFA, GRIND, and HQSAR methods employed to build predictive 2D- and 3D-QSAR models for adsorption of simple benzene derivatives on CNTs in aqueous media successfully.</description><subject>Adsorption</subject><subject>Aqueous solutions</subject><subject>Benzene</subject><subject>Chemistry</subject><subject>Chemistry and Materials Science</subject><subject>Comparative analysis</subject><subject>Computer Applications in Chemistry</subject><subject>Hydrocarbons</subject><subject>Hydrogen bonds</subject><subject>Multi wall carbon nanotubes</subject><subject>Nanotubes</subject><subject>Original Research</subject><subject>Physical Chemistry</subject><subject>Steric hindrance</subject><subject>Substitutes</subject><subject>Theoretical and Computational Chemistry</subject><subject>Three dimensional models</subject><issn>1040-0400</issn><issn>1572-9001</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2023</creationdate><recordtype>article</recordtype><recordid>eNp9kV1LHTEQhhdpQWv7B7wKeOvafG7Oenc4foKtaNvrkN2dSGRPsk6y0tY_b-wK3pVMeIdhnkmYt6oOGD1mlOqviTHOZU05rylrtajVTrXHlOZ1Syn7UHIqaV0u3a0-pfRQiqwRaq96Pvs9jRF9uCcp49znGe1IEB5nj7CFkBOJjiS_nUYgHYS_EIAMgP7JZv8EibiIxA4p4pR9DKREb7ErEmyIee4gnZBN_Ha-PiIXd1ffT4-IDQO5vP2xvvtcfXR2TPDlTferX-dnPzeX9fXNxdVmfV33Qq1yvRq0YI7R1mkJ1FJQqrGcaTmwrlVSMqcbqmnXWtswkMJpoWXfgehco_qyjP3qcJk7YXycIWXzEGcM5UnD9UpzqZluS9fx0nVvRzA-uJjR9uUMsPV9DOB8qa-1ZE2rm1YUgC9AjzElBGcm9FuLfwyj5tUVs7hiiivmnytGFUgsUJpelw74_pf_UC-S648y</recordid><startdate>20230401</startdate><enddate>20230401</enddate><creator>Mansouri, Forough</creator><creator>Sarlak, Nahid</creator><general>Springer US</general><general>Springer</general><general>Springer Nature B.V</general><scope>AAYXX</scope><scope>CITATION</scope><orcidid>https://orcid.org/0000-0002-6833-8636</orcidid><orcidid>https://orcid.org/0000-0002-4203-0967</orcidid></search><sort><creationdate>20230401</creationdate><title>Exploring structural requirements of simple benzene derivatives for adsorption on carbon nanotubes: CoMFA, GRIND, and HQSAR</title><author>Mansouri, Forough ; Sarlak, Nahid</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c358t-8d731f109f74e0a0e556a2174d1b95441f76070b9aa61e43f7374cbe3bf65c973</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2023</creationdate><topic>Adsorption</topic><topic>Aqueous solutions</topic><topic>Benzene</topic><topic>Chemistry</topic><topic>Chemistry and Materials Science</topic><topic>Comparative analysis</topic><topic>Computer Applications in Chemistry</topic><topic>Hydrocarbons</topic><topic>Hydrogen bonds</topic><topic>Multi wall carbon nanotubes</topic><topic>Nanotubes</topic><topic>Original Research</topic><topic>Physical Chemistry</topic><topic>Steric hindrance</topic><topic>Substitutes</topic><topic>Theoretical and Computational Chemistry</topic><topic>Three dimensional models</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Mansouri, Forough</creatorcontrib><creatorcontrib>Sarlak, Nahid</creatorcontrib><collection>CrossRef</collection><jtitle>Structural chemistry</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Mansouri, Forough</au><au>Sarlak, Nahid</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Exploring structural requirements of simple benzene derivatives for adsorption on carbon nanotubes: CoMFA, GRIND, and HQSAR</atitle><jtitle>Structural chemistry</jtitle><stitle>Struct Chem</stitle><date>2023-04-01</date><risdate>2023</risdate><volume>34</volume><issue>2</issue><spage>413</spage><epage>424</epage><pages>413-424</pages><issn>1040-0400</issn><eissn>1572-9001</eissn><abstract>In this work, three quantitative structure–activity relationship (QSAR) methods involving comparative molecular field analysis (CoMFA) and GRid-INdependent Descriptors (GRIND) based 3D-QSAR and hologram QSAR (HQSAR) were evaluated for predicting adsorption coefficients of the simple benzene derivatives on mutiwalled carbon nanotubes (MWCNTs). The contour maps of CoMFA suggested that the steric hindrance had a significant impact on the adsorption process of substituted benzenes. GRIND studies investigate the important mutual distances between molecular features, which confirmed the role of hydrophobic groups as well as their distances from different steric hot spots in the benzene ring of the molecules. According to HQSAR model and its fragment contribution map, the hydrogen bond donor and acceptor were also found to play an important role in governing adsorption of substituted benzenes on CNTs. The CoMFA, GRIND, and HQSAR methods employed to build predictive 2D- and 3D-QSAR models for adsorption of simple benzene derivatives on CNTs in aqueous media successfully.</abstract><cop>New York</cop><pub>Springer US</pub><doi>10.1007/s11224-022-01973-5</doi><tpages>12</tpages><orcidid>https://orcid.org/0000-0002-6833-8636</orcidid><orcidid>https://orcid.org/0000-0002-4203-0967</orcidid></addata></record> |
fulltext | fulltext |
identifier | ISSN: 1040-0400 |
ispartof | Structural chemistry, 2023-04, Vol.34 (2), p.413-424 |
issn | 1040-0400 1572-9001 |
language | eng |
recordid | cdi_proquest_journals_2787247179 |
source | SpringerNature Journals |
subjects | Adsorption Aqueous solutions Benzene Chemistry Chemistry and Materials Science Comparative analysis Computer Applications in Chemistry Hydrocarbons Hydrogen bonds Multi wall carbon nanotubes Nanotubes Original Research Physical Chemistry Steric hindrance Substitutes Theoretical and Computational Chemistry Three dimensional models |
title | Exploring structural requirements of simple benzene derivatives for adsorption on carbon nanotubes: CoMFA, GRIND, and HQSAR |
url | https://sfx.bib-bvb.de/sfx_tum?ctx_ver=Z39.88-2004&ctx_enc=info:ofi/enc:UTF-8&ctx_tim=2024-12-20T01%3A33%3A45IST&url_ver=Z39.88-2004&url_ctx_fmt=infofi/fmt:kev:mtx:ctx&rfr_id=info:sid/primo.exlibrisgroup.com:primo3-Article-gale_proqu&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rft.genre=article&rft.atitle=Exploring%20structural%20requirements%20of%20simple%20benzene%20derivatives%20for%20adsorption%20on%20carbon%20nanotubes:%20CoMFA,%20GRIND,%20and%20HQSAR&rft.jtitle=Structural%20chemistry&rft.au=Mansouri,%20Forough&rft.date=2023-04-01&rft.volume=34&rft.issue=2&rft.spage=413&rft.epage=424&rft.pages=413-424&rft.issn=1040-0400&rft.eissn=1572-9001&rft_id=info:doi/10.1007/s11224-022-01973-5&rft_dat=%3Cgale_proqu%3EA741697693%3C/gale_proqu%3E%3Curl%3E%3C/url%3E&disable_directlink=true&sfx.directlink=off&sfx.report_link=0&rft_id=info:oai/&rft_pqid=2787247179&rft_id=info:pmid/&rft_galeid=A741697693&rfr_iscdi=true |