Designing an Automatic Sleep Staging System Using Deep Convolutional Neural Network Fed by Nonlinear Dynamic Transformation
Purpose Studies have shown that sleep significantly affects mental and physical health and quality of life. Sleep staging is one of the most effective diagnostic and therapeutic strategies for sleep disorders. Manual sleep scoring can be a time and cost-consuming process that has a limited level of...
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Veröffentlicht in: | Journal of medical and biological engineering 2023-02, Vol.43 (1), p.11-21 |
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creator | Sholeyan, Ali Erfani Rahatabad, Fereidoun Nowshiravan Setarehdan, Seyed Kamaledin |
description | Purpose
Studies have shown that sleep significantly affects mental and physical health and quality of life. Sleep staging is one of the most effective diagnostic and therapeutic strategies for sleep disorders. Manual sleep scoring can be a time and cost-consuming process that has a limited level of reliability among raters. This necessitates the use of computer-aided sleep staging. The main objective of the present study is to design an accurate and robust automatic sleep stage scoring system using convolutional neural networks (CNNs) and nonlinear dynamics methods.
Methods
Since deep learning techniques are effective at classifying images, it is common to convert signals to images first, then feed the images to CNNs. In this study, we propose a new approach for the signal to image transformation, based on the recurrence plot of Polysomnography (PSG) and its frequency characteristics. We evaluated our model using data from 20 subjects of the Sleep-EDF expanded database.
Results
For five-state classification, our model achieved accuracy, MF1, and Cohen’s Kappa values of 92.5%, 87.1%, and 0.89, respectively. The proposed transformation also significantly improved the detection of the S1 (N1) stage with an F1-score of 0.71.
Conclusion
The findings of our study demonstrated that a CNN fed by the proposed transformation, which elicits nonlinear characteristics and hidden dynamical patterns in PSG recordings, can enhance performance and improve the efficiency of a sleep staging system. |
doi_str_mv | 10.1007/s40846-022-00771-y |
format | Article |
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Studies have shown that sleep significantly affects mental and physical health and quality of life. Sleep staging is one of the most effective diagnostic and therapeutic strategies for sleep disorders. Manual sleep scoring can be a time and cost-consuming process that has a limited level of reliability among raters. This necessitates the use of computer-aided sleep staging. The main objective of the present study is to design an accurate and robust automatic sleep stage scoring system using convolutional neural networks (CNNs) and nonlinear dynamics methods.
Methods
Since deep learning techniques are effective at classifying images, it is common to convert signals to images first, then feed the images to CNNs. In this study, we propose a new approach for the signal to image transformation, based on the recurrence plot of Polysomnography (PSG) and its frequency characteristics. We evaluated our model using data from 20 subjects of the Sleep-EDF expanded database.
Results
For five-state classification, our model achieved accuracy, MF1, and Cohen’s Kappa values of 92.5%, 87.1%, and 0.89, respectively. The proposed transformation also significantly improved the detection of the S1 (N1) stage with an F1-score of 0.71.
Conclusion
The findings of our study demonstrated that a CNN fed by the proposed transformation, which elicits nonlinear characteristics and hidden dynamical patterns in PSG recordings, can enhance performance and improve the efficiency of a sleep staging system.</description><identifier>ISSN: 1609-0985</identifier><identifier>EISSN: 2199-4757</identifier><identifier>DOI: 10.1007/s40846-022-00771-y</identifier><language>eng</language><publisher>Berlin/Heidelberg: Springer Berlin Heidelberg</publisher><subject>Artificial neural networks ; Biological Techniques ; Biomedical and Life Sciences ; Biomedical Engineering and Bioengineering ; Biomedical Engineering/Biotechnology ; Biomedicine ; Deep learning ; Dynamical systems ; Image classification ; Machine learning ; Model accuracy ; Neural networks ; Nonlinear dynamics ; Nonlinear systems ; Original Article ; Quality of life ; Regenerative Medicine/Tissue Engineering ; Sleep ; Sleep disorders ; Transformations</subject><ispartof>Journal of medical and biological engineering, 2023-02, Vol.43 (1), p.11-21</ispartof><rights>Taiwanese Society of Biomedical Engineering 2022. Springer Nature or its licensor (e.g. a society or other partner) holds exclusive rights to this article under a publishing agreement with the author(s) or other rightsholder(s); author self-archiving of the accepted manuscript version of this article is solely governed by the terms of such publishing agreement and applicable law.</rights><woscitedreferencessubscribed>false</woscitedreferencessubscribed><cites>FETCH-LOGICAL-c270t-a5e26006d494ce865f48cbc2f7762b5332c49647f7b9997f785f5777d8b39bb73</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://link.springer.com/content/pdf/10.1007/s40846-022-00771-y$$EPDF$$P50$$Gspringer$$H</linktopdf><linktohtml>$$Uhttps://link.springer.com/10.1007/s40846-022-00771-y$$EHTML$$P50$$Gspringer$$H</linktohtml><link.rule.ids>314,776,780,27901,27902,41464,42533,51294</link.rule.ids></links><search><creatorcontrib>Sholeyan, Ali Erfani</creatorcontrib><creatorcontrib>Rahatabad, Fereidoun Nowshiravan</creatorcontrib><creatorcontrib>Setarehdan, Seyed Kamaledin</creatorcontrib><title>Designing an Automatic Sleep Staging System Using Deep Convolutional Neural Network Fed by Nonlinear Dynamic Transformation</title><title>Journal of medical and biological engineering</title><addtitle>J. Med. Biol. Eng</addtitle><description>Purpose
Studies have shown that sleep significantly affects mental and physical health and quality of life. Sleep staging is one of the most effective diagnostic and therapeutic strategies for sleep disorders. Manual sleep scoring can be a time and cost-consuming process that has a limited level of reliability among raters. This necessitates the use of computer-aided sleep staging. The main objective of the present study is to design an accurate and robust automatic sleep stage scoring system using convolutional neural networks (CNNs) and nonlinear dynamics methods.
Methods
Since deep learning techniques are effective at classifying images, it is common to convert signals to images first, then feed the images to CNNs. In this study, we propose a new approach for the signal to image transformation, based on the recurrence plot of Polysomnography (PSG) and its frequency characteristics. We evaluated our model using data from 20 subjects of the Sleep-EDF expanded database.
Results
For five-state classification, our model achieved accuracy, MF1, and Cohen’s Kappa values of 92.5%, 87.1%, and 0.89, respectively. The proposed transformation also significantly improved the detection of the S1 (N1) stage with an F1-score of 0.71.
Conclusion
The findings of our study demonstrated that a CNN fed by the proposed transformation, which elicits nonlinear characteristics and hidden dynamical patterns in PSG recordings, can enhance performance and improve the efficiency of a sleep staging system.</description><subject>Artificial neural networks</subject><subject>Biological Techniques</subject><subject>Biomedical and Life Sciences</subject><subject>Biomedical Engineering and Bioengineering</subject><subject>Biomedical Engineering/Biotechnology</subject><subject>Biomedicine</subject><subject>Deep learning</subject><subject>Dynamical systems</subject><subject>Image classification</subject><subject>Machine learning</subject><subject>Model accuracy</subject><subject>Neural networks</subject><subject>Nonlinear dynamics</subject><subject>Nonlinear systems</subject><subject>Original Article</subject><subject>Quality of life</subject><subject>Regenerative Medicine/Tissue Engineering</subject><subject>Sleep</subject><subject>Sleep disorders</subject><subject>Transformations</subject><issn>1609-0985</issn><issn>2199-4757</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2023</creationdate><recordtype>article</recordtype><recordid>eNp9kMFPwyAYxYnRxGXuH_BE4hmllEI5LptTk2Uetp0J7WjT2cEEqmn856XWxJtcXr58772P_AC4TfB9gjF_8BTnlCFMCIojT1B_ASYkEQJRnvFLMEkYFgiLPLsGM--POL5UMJbkE_C11L6pTWNqqAycd8GeVGhKuG21PsNtUPWw2vY-6BPc-2FYDpuFNR-27UJjjWrhRnfuR8KndW9wpQ-w6OHGmrYxWjm47I06xdadU8ZX1g03rLkBV5VqvZ796hTsV4-7xTNavz69LOZrVBKOA1KZJgxjdqCCljpnWUXzsihJxTkjRZampKSCUV7xQggRJc-qjHN-yItUFAVPp-Bu7D07-95pH-TRdi7-20vCec5opEeii4yu0lnvna7k2TUn5XqZYDlwliNnGTnLH86yj6F0DPloNrV2f9X_pL4BIp-ByA</recordid><startdate>20230201</startdate><enddate>20230201</enddate><creator>Sholeyan, Ali Erfani</creator><creator>Rahatabad, Fereidoun Nowshiravan</creator><creator>Setarehdan, Seyed Kamaledin</creator><general>Springer Berlin Heidelberg</general><general>Springer Nature B.V</general><scope>AAYXX</scope><scope>CITATION</scope><scope>K9.</scope></search><sort><creationdate>20230201</creationdate><title>Designing an Automatic Sleep Staging System Using Deep Convolutional Neural Network Fed by Nonlinear Dynamic Transformation</title><author>Sholeyan, Ali Erfani ; Rahatabad, Fereidoun Nowshiravan ; Setarehdan, Seyed Kamaledin</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c270t-a5e26006d494ce865f48cbc2f7762b5332c49647f7b9997f785f5777d8b39bb73</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2023</creationdate><topic>Artificial neural networks</topic><topic>Biological Techniques</topic><topic>Biomedical and Life Sciences</topic><topic>Biomedical Engineering and Bioengineering</topic><topic>Biomedical Engineering/Biotechnology</topic><topic>Biomedicine</topic><topic>Deep learning</topic><topic>Dynamical systems</topic><topic>Image classification</topic><topic>Machine learning</topic><topic>Model accuracy</topic><topic>Neural networks</topic><topic>Nonlinear dynamics</topic><topic>Nonlinear systems</topic><topic>Original Article</topic><topic>Quality of life</topic><topic>Regenerative Medicine/Tissue Engineering</topic><topic>Sleep</topic><topic>Sleep disorders</topic><topic>Transformations</topic><toplevel>online_resources</toplevel><creatorcontrib>Sholeyan, Ali Erfani</creatorcontrib><creatorcontrib>Rahatabad, Fereidoun Nowshiravan</creatorcontrib><creatorcontrib>Setarehdan, Seyed Kamaledin</creatorcontrib><collection>CrossRef</collection><collection>ProQuest Health & Medical Complete (Alumni)</collection><jtitle>Journal of medical and biological engineering</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Sholeyan, Ali Erfani</au><au>Rahatabad, Fereidoun Nowshiravan</au><au>Setarehdan, Seyed Kamaledin</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Designing an Automatic Sleep Staging System Using Deep Convolutional Neural Network Fed by Nonlinear Dynamic Transformation</atitle><jtitle>Journal of medical and biological engineering</jtitle><stitle>J. Med. Biol. Eng</stitle><date>2023-02-01</date><risdate>2023</risdate><volume>43</volume><issue>1</issue><spage>11</spage><epage>21</epage><pages>11-21</pages><issn>1609-0985</issn><eissn>2199-4757</eissn><abstract>Purpose
Studies have shown that sleep significantly affects mental and physical health and quality of life. Sleep staging is one of the most effective diagnostic and therapeutic strategies for sleep disorders. Manual sleep scoring can be a time and cost-consuming process that has a limited level of reliability among raters. This necessitates the use of computer-aided sleep staging. The main objective of the present study is to design an accurate and robust automatic sleep stage scoring system using convolutional neural networks (CNNs) and nonlinear dynamics methods.
Methods
Since deep learning techniques are effective at classifying images, it is common to convert signals to images first, then feed the images to CNNs. In this study, we propose a new approach for the signal to image transformation, based on the recurrence plot of Polysomnography (PSG) and its frequency characteristics. We evaluated our model using data from 20 subjects of the Sleep-EDF expanded database.
Results
For five-state classification, our model achieved accuracy, MF1, and Cohen’s Kappa values of 92.5%, 87.1%, and 0.89, respectively. The proposed transformation also significantly improved the detection of the S1 (N1) stage with an F1-score of 0.71.
Conclusion
The findings of our study demonstrated that a CNN fed by the proposed transformation, which elicits nonlinear characteristics and hidden dynamical patterns in PSG recordings, can enhance performance and improve the efficiency of a sleep staging system.</abstract><cop>Berlin/Heidelberg</cop><pub>Springer Berlin Heidelberg</pub><doi>10.1007/s40846-022-00771-y</doi><tpages>11</tpages></addata></record> |
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subjects | Artificial neural networks Biological Techniques Biomedical and Life Sciences Biomedical Engineering and Bioengineering Biomedical Engineering/Biotechnology Biomedicine Deep learning Dynamical systems Image classification Machine learning Model accuracy Neural networks Nonlinear dynamics Nonlinear systems Original Article Quality of life Regenerative Medicine/Tissue Engineering Sleep Sleep disorders Transformations |
title | Designing an Automatic Sleep Staging System Using Deep Convolutional Neural Network Fed by Nonlinear Dynamic Transformation |
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