A Safety Framework for Flow Decomposition Problems via Integer Linear Programming

Many important problems in Bioinformatics (e.g., assembly or multi-assembly) admit multiple solutions, while the final objective is to report only one. A common approach to deal with this uncertainty is finding safe partial solutions (e.g., contigs) which are common to all solutions. Previous resear...

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Veröffentlicht in:	arXiv.org 2023-01
Hauptverfasser:	Dias, Fernando H C, Caceres, Manuel, Williams, Lucia, Mumey, Brendan, Tomescu, Alexandru I
Format:	Artikel
Sprache:	eng
Schlagworte:	Assembly Bioinformatics Datasets Decomposition Integer programming Linear programming Minimum flow Safety
Online-Zugang:	Volltext
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