Construction, Characterization, and Application of an Ammonium Transporter (AmtB) Deletion Mutant of the Nitrogen-Fixing Bacterium Kosakonia radicincitans GXGL-4A in Cucumis sativus L. Seedlings
Nitrogen is an important factor affecting crop yield, but excessive use of chemical nitrogen fertilizer has caused decline in nitrogen utilization and soil and water pollution. Reducing the utilization of chemical nitrogen fertilizers by biological nitrogen fixation (BNF) is feasible for green produ...
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description | Nitrogen is an important factor affecting crop yield, but excessive use of chemical nitrogen fertilizer has caused decline in nitrogen utilization and soil and water pollution. Reducing the utilization of chemical nitrogen fertilizers by biological nitrogen fixation (BNF) is feasible for green production of crops. However, there are few reports on how to have more ammonium produced by nitrogen-fixing bacteria (NFB) flow outside the cell. In the present study, the
amt
B gene encoding an ammonium transporter (AmtB) in the genome of NFB strain
Kosakonia radicincitans
GXGL-4A was deleted and the △
amt
B mutant was characterized. The results showed that deletion of the
amt
B gene had no influence on the growth of bacterial cells. The extracellular ammonium nitrogen (NH
4
+
) content of the △
amt
B mutant under nitrogen-free culture conditions was significantly higher than that of the wild-type strain GXGL-4A (WT-GXGL-4A), suggesting disruption of NH
4
+
transport. Meanwhile, the plant growth-promoting effect in cucumber seedlings was visualized after fertilization using cells of the △
amt
B mutant. NFB fertilization continuously increased the cucumber rhizosphere soil pH. The nitrate nitrogen (NO
3
−
) content in soil in the △
amt
B treatment group was significantly higher than that in the WT-GXGL-4A treatment group in the short term but there was no difference in soil NH
4
+
contents between groups. Soil enzymatic activities varied during a 45-day assessment period, indicating that △
amt
B fertilization influenced soil nitrogen cycling in the cucumber rhizosphere. The results will provide a solid foundation for developing the NFB GXGL-4A into an efficient biofertilizer agent. |
doi_str_mv | 10.1007/s00284-022-03160-5 |
format | Article |
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amt
B gene encoding an ammonium transporter (AmtB) in the genome of NFB strain
Kosakonia radicincitans
GXGL-4A was deleted and the △
amt
B mutant was characterized. The results showed that deletion of the
amt
B gene had no influence on the growth of bacterial cells. The extracellular ammonium nitrogen (NH
4
+
) content of the △
amt
B mutant under nitrogen-free culture conditions was significantly higher than that of the wild-type strain GXGL-4A (WT-GXGL-4A), suggesting disruption of NH
4
+
transport. Meanwhile, the plant growth-promoting effect in cucumber seedlings was visualized after fertilization using cells of the △
amt
B mutant. NFB fertilization continuously increased the cucumber rhizosphere soil pH. The nitrate nitrogen (NO
3
−
) content in soil in the △
amt
B treatment group was significantly higher than that in the WT-GXGL-4A treatment group in the short term but there was no difference in soil NH
4
+
contents between groups. Soil enzymatic activities varied during a 45-day assessment period, indicating that △
amt
B fertilization influenced soil nitrogen cycling in the cucumber rhizosphere. The results will provide a solid foundation for developing the NFB GXGL-4A into an efficient biofertilizer agent.</description><identifier>ISSN: 0343-8651</identifier><identifier>EISSN: 1432-0991</identifier><identifier>DOI: 10.1007/s00284-022-03160-5</identifier><identifier>PMID: 36588112</identifier><language>eng</language><publisher>New York: Springer US</publisher><subject>Ammonium ; Ammonium Compounds ; Ammonium transporter ; Bacteria ; Bacteria - metabolism ; Biofertilizers ; Biomedical and Life Sciences ; Biotechnology ; Cell culture ; Crop production ; Crop yield ; Cucumbers ; Cucumis sativus ; Deletion mutant ; Enzymatic activity ; Fertilization ; Fertilizers ; Fertilizers - analysis ; Gene deletion ; Genomes ; Kosakonia radicincitans ; Life Sciences ; Membrane Transport Proteins ; Microbiology ; Mutants ; Nitrates ; Nitrogen ; Nitrogen - metabolism ; Nitrogen cycle ; Nitrogen fixation ; Nitrogen-Fixing Bacteria ; Nitrogenation ; Plant growth ; Pollution control ; Rhizosphere ; Seedlings ; Soil - chemistry ; Soil pH ; Soil pollution ; Soil water ; Soils ; Water pollution</subject><ispartof>Current microbiology, 2023-02, Vol.80 (2), p.58, Article 58</ispartof><rights>The Author(s), under exclusive licence to Springer Science+Business Media, LLC, part of Springer Nature 2022. Springer Nature or its licensor (e.g. a society or other partner) holds exclusive rights to this article under a publishing agreement with the author(s) or other rightsholder(s); author self-archiving of the accepted manuscript version of this article is solely governed by the terms of such publishing agreement and applicable law.</rights><rights>2022. The Author(s), under exclusive licence to Springer Science+Business Media, LLC, part of Springer Nature.</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><cites>FETCH-LOGICAL-c326t-dcb506d74f3b01694a9230f1c568c5d69e7c97b5f5ecf8159681dc85df184d73</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://link.springer.com/content/pdf/10.1007/s00284-022-03160-5$$EPDF$$P50$$Gspringer$$H</linktopdf><linktohtml>$$Uhttps://link.springer.com/10.1007/s00284-022-03160-5$$EHTML$$P50$$Gspringer$$H</linktohtml><link.rule.ids>314,780,784,27924,27925,41488,42557,51319</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/36588112$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Bao, Yu-Qing</creatorcontrib><creatorcontrib>Zhang, Meng-Ting</creatorcontrib><creatorcontrib>Feng, Bao-Yun</creatorcontrib><creatorcontrib>Jieensi, Wulale</creatorcontrib><creatorcontrib>Xu, Yu</creatorcontrib><creatorcontrib>Xu, Lu-Rong</creatorcontrib><creatorcontrib>Han, Ying-Ying</creatorcontrib><creatorcontrib>Chen, Yun-Peng</creatorcontrib><title>Construction, Characterization, and Application of an Ammonium Transporter (AmtB) Deletion Mutant of the Nitrogen-Fixing Bacterium Kosakonia radicincitans GXGL-4A in Cucumis sativus L. Seedlings</title><title>Current microbiology</title><addtitle>Curr Microbiol</addtitle><addtitle>Curr Microbiol</addtitle><description>Nitrogen is an important factor affecting crop yield, but excessive use of chemical nitrogen fertilizer has caused decline in nitrogen utilization and soil and water pollution. Reducing the utilization of chemical nitrogen fertilizers by biological nitrogen fixation (BNF) is feasible for green production of crops. However, there are few reports on how to have more ammonium produced by nitrogen-fixing bacteria (NFB) flow outside the cell. In the present study, the
amt
B gene encoding an ammonium transporter (AmtB) in the genome of NFB strain
Kosakonia radicincitans
GXGL-4A was deleted and the △
amt
B mutant was characterized. The results showed that deletion of the
amt
B gene had no influence on the growth of bacterial cells. The extracellular ammonium nitrogen (NH
4
+
) content of the △
amt
B mutant under nitrogen-free culture conditions was significantly higher than that of the wild-type strain GXGL-4A (WT-GXGL-4A), suggesting disruption of NH
4
+
transport. Meanwhile, the plant growth-promoting effect in cucumber seedlings was visualized after fertilization using cells of the △
amt
B mutant. NFB fertilization continuously increased the cucumber rhizosphere soil pH. The nitrate nitrogen (NO
3
−
) content in soil in the △
amt
B treatment group was significantly higher than that in the WT-GXGL-4A treatment group in the short term but there was no difference in soil NH
4
+
contents between groups. Soil enzymatic activities varied during a 45-day assessment period, indicating that △
amt
B fertilization influenced soil nitrogen cycling in the cucumber rhizosphere. The results will provide a solid foundation for developing the NFB GXGL-4A into an efficient biofertilizer agent.</description><subject>Ammonium</subject><subject>Ammonium Compounds</subject><subject>Ammonium transporter</subject><subject>Bacteria</subject><subject>Bacteria - metabolism</subject><subject>Biofertilizers</subject><subject>Biomedical and Life Sciences</subject><subject>Biotechnology</subject><subject>Cell culture</subject><subject>Crop production</subject><subject>Crop yield</subject><subject>Cucumbers</subject><subject>Cucumis sativus</subject><subject>Deletion mutant</subject><subject>Enzymatic activity</subject><subject>Fertilization</subject><subject>Fertilizers</subject><subject>Fertilizers - analysis</subject><subject>Gene deletion</subject><subject>Genomes</subject><subject>Kosakonia radicincitans</subject><subject>Life Sciences</subject><subject>Membrane Transport Proteins</subject><subject>Microbiology</subject><subject>Mutants</subject><subject>Nitrates</subject><subject>Nitrogen</subject><subject>Nitrogen - metabolism</subject><subject>Nitrogen cycle</subject><subject>Nitrogen fixation</subject><subject>Nitrogen-Fixing Bacteria</subject><subject>Nitrogenation</subject><subject>Plant growth</subject><subject>Pollution control</subject><subject>Rhizosphere</subject><subject>Seedlings</subject><subject>Soil - chemistry</subject><subject>Soil pH</subject><subject>Soil pollution</subject><subject>Soil water</subject><subject>Soils</subject><subject>Water pollution</subject><issn>0343-8651</issn><issn>1432-0991</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2023</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><sourceid>8G5</sourceid><sourceid>ABUWG</sourceid><sourceid>AFKRA</sourceid><sourceid>AZQEC</sourceid><sourceid>BENPR</sourceid><sourceid>CCPQU</sourceid><sourceid>DWQXO</sourceid><sourceid>GNUQQ</sourceid><sourceid>GUQSH</sourceid><sourceid>M2O</sourceid><recordid>eNp9kU-P1CAAxYnRuLOrX8CDIfHiJrJCKS0cu9UdjaMenIO3hgE6yzqFyh-jfjw_mex01ZsnwuO93yN5ADwh-IJg3L6MGFe8RriqEKakwYjdAytS03IVgtwHK0xrinjDyAk4jfEGY1IJTB6CE9owzgmpVuBX711MIatkvXsB-2sZpEom2J9yUaTTsJvng1VHAfqxSLCbJu9snuA2SBdnH0oEPu-mdHkOX5mDOVrf5yRduk2kawM_2BT83jh0Zb9bt4eXS09hvPNRfik4CYPUVlmnbAlGuP683qC6g9bBPqs82Qhj-cS3HOHmAn4yRh8KKD4CD0Z5iObx3XkGtlevt_0btPm4ftt3G6Ro1SSk1Y7hRrf1SHeYNKKWoqJ4JIo1XDHdCNMq0e7YyIwaOWGi4UQrzvRIeK1begaeLdg5-K_ZxDTc-BxcaRyqlgnOMa5pcVWLSwUfYzDjMAc7yfBjIHi4XW1YVhvKasNxtYGV0NM7dN5NRv-N_JmpGOhiiOXJ7U341_0f7G9vqqTr</recordid><startdate>20230201</startdate><enddate>20230201</enddate><creator>Bao, Yu-Qing</creator><creator>Zhang, Meng-Ting</creator><creator>Feng, Bao-Yun</creator><creator>Jieensi, Wulale</creator><creator>Xu, Yu</creator><creator>Xu, Lu-Rong</creator><creator>Han, Ying-Ying</creator><creator>Chen, Yun-Peng</creator><general>Springer US</general><general>Springer Nature B.V</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>3V.</scope><scope>7QL</scope><scope>7T7</scope><scope>7TK</scope><scope>7TM</scope><scope>7U9</scope><scope>7X7</scope><scope>7XB</scope><scope>88A</scope><scope>88E</scope><scope>8AO</scope><scope>8FD</scope><scope>8FE</scope><scope>8FH</scope><scope>8FI</scope><scope>8FJ</scope><scope>8FK</scope><scope>8G5</scope><scope>ABUWG</scope><scope>AFKRA</scope><scope>AZQEC</scope><scope>BBNVY</scope><scope>BENPR</scope><scope>BHPHI</scope><scope>C1K</scope><scope>CCPQU</scope><scope>DWQXO</scope><scope>FR3</scope><scope>FYUFA</scope><scope>GHDGH</scope><scope>GNUQQ</scope><scope>GUQSH</scope><scope>H94</scope><scope>HCIFZ</scope><scope>K9.</scope><scope>LK8</scope><scope>M0S</scope><scope>M1P</scope><scope>M2O</scope><scope>M7N</scope><scope>M7P</scope><scope>MBDVC</scope><scope>P64</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>Q9U</scope><scope>RC3</scope></search><sort><creationdate>20230201</creationdate><title>Construction, Characterization, and Application of an Ammonium Transporter (AmtB) Deletion Mutant of the Nitrogen-Fixing Bacterium Kosakonia radicincitans GXGL-4A in Cucumis sativus L. Seedlings</title><author>Bao, Yu-Qing ; Zhang, Meng-Ting ; Feng, Bao-Yun ; Jieensi, Wulale ; Xu, Yu ; Xu, Lu-Rong ; Han, Ying-Ying ; Chen, Yun-Peng</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c326t-dcb506d74f3b01694a9230f1c568c5d69e7c97b5f5ecf8159681dc85df184d73</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2023</creationdate><topic>Ammonium</topic><topic>Ammonium Compounds</topic><topic>Ammonium transporter</topic><topic>Bacteria</topic><topic>Bacteria - metabolism</topic><topic>Biofertilizers</topic><topic>Biomedical and Life Sciences</topic><topic>Biotechnology</topic><topic>Cell culture</topic><topic>Crop production</topic><topic>Crop yield</topic><topic>Cucumbers</topic><topic>Cucumis sativus</topic><topic>Deletion mutant</topic><topic>Enzymatic activity</topic><topic>Fertilization</topic><topic>Fertilizers</topic><topic>Fertilizers - analysis</topic><topic>Gene deletion</topic><topic>Genomes</topic><topic>Kosakonia radicincitans</topic><topic>Life Sciences</topic><topic>Membrane Transport Proteins</topic><topic>Microbiology</topic><topic>Mutants</topic><topic>Nitrates</topic><topic>Nitrogen</topic><topic>Nitrogen - metabolism</topic><topic>Nitrogen cycle</topic><topic>Nitrogen fixation</topic><topic>Nitrogen-Fixing Bacteria</topic><topic>Nitrogenation</topic><topic>Plant growth</topic><topic>Pollution control</topic><topic>Rhizosphere</topic><topic>Seedlings</topic><topic>Soil - chemistry</topic><topic>Soil pH</topic><topic>Soil pollution</topic><topic>Soil water</topic><topic>Soils</topic><topic>Water pollution</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Bao, Yu-Qing</creatorcontrib><creatorcontrib>Zhang, Meng-Ting</creatorcontrib><creatorcontrib>Feng, Bao-Yun</creatorcontrib><creatorcontrib>Jieensi, Wulale</creatorcontrib><creatorcontrib>Xu, Yu</creatorcontrib><creatorcontrib>Xu, Lu-Rong</creatorcontrib><creatorcontrib>Han, Ying-Ying</creatorcontrib><creatorcontrib>Chen, Yun-Peng</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>ProQuest Central (Corporate)</collection><collection>Bacteriology Abstracts (Microbiology B)</collection><collection>Industrial and Applied Microbiology Abstracts (Microbiology A)</collection><collection>Neurosciences Abstracts</collection><collection>Nucleic Acids Abstracts</collection><collection>Virology and AIDS Abstracts</collection><collection>Health & Medical Collection</collection><collection>ProQuest Central (purchase pre-March 2016)</collection><collection>Biology Database (Alumni Edition)</collection><collection>Medical Database (Alumni Edition)</collection><collection>ProQuest Pharma Collection</collection><collection>Technology Research Database</collection><collection>ProQuest SciTech Collection</collection><collection>ProQuest Natural Science Collection</collection><collection>Hospital Premium Collection</collection><collection>Hospital Premium Collection (Alumni Edition)</collection><collection>ProQuest Central (Alumni) (purchase pre-March 2016)</collection><collection>Research Library (Alumni Edition)</collection><collection>ProQuest Central (Alumni Edition)</collection><collection>ProQuest Central UK/Ireland</collection><collection>ProQuest Central Essentials</collection><collection>Biological Science Collection</collection><collection>ProQuest Central</collection><collection>Natural Science Collection</collection><collection>Environmental Sciences and Pollution Management</collection><collection>ProQuest One Community College</collection><collection>ProQuest Central Korea</collection><collection>Engineering Research Database</collection><collection>Health Research Premium Collection</collection><collection>Health Research Premium Collection (Alumni)</collection><collection>ProQuest Central Student</collection><collection>Research Library Prep</collection><collection>AIDS and Cancer Research Abstracts</collection><collection>SciTech Premium Collection</collection><collection>ProQuest Health & Medical Complete (Alumni)</collection><collection>ProQuest Biological Science Collection</collection><collection>Health & Medical Collection (Alumni Edition)</collection><collection>Medical Database</collection><collection>Research Library</collection><collection>Algology Mycology and Protozoology Abstracts (Microbiology C)</collection><collection>Biological Science Database</collection><collection>Research Library (Corporate)</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>ProQuest One Academic Eastern Edition (DO NOT USE)</collection><collection>ProQuest One Academic</collection><collection>ProQuest One Academic UKI Edition</collection><collection>ProQuest Central Basic</collection><collection>Genetics Abstracts</collection><jtitle>Current microbiology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Bao, Yu-Qing</au><au>Zhang, Meng-Ting</au><au>Feng, Bao-Yun</au><au>Jieensi, Wulale</au><au>Xu, Yu</au><au>Xu, Lu-Rong</au><au>Han, Ying-Ying</au><au>Chen, Yun-Peng</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Construction, Characterization, and Application of an Ammonium Transporter (AmtB) Deletion Mutant of the Nitrogen-Fixing Bacterium Kosakonia radicincitans GXGL-4A in Cucumis sativus L. Seedlings</atitle><jtitle>Current microbiology</jtitle><stitle>Curr Microbiol</stitle><addtitle>Curr Microbiol</addtitle><date>2023-02-01</date><risdate>2023</risdate><volume>80</volume><issue>2</issue><spage>58</spage><pages>58-</pages><artnum>58</artnum><issn>0343-8651</issn><eissn>1432-0991</eissn><abstract>Nitrogen is an important factor affecting crop yield, but excessive use of chemical nitrogen fertilizer has caused decline in nitrogen utilization and soil and water pollution. Reducing the utilization of chemical nitrogen fertilizers by biological nitrogen fixation (BNF) is feasible for green production of crops. However, there are few reports on how to have more ammonium produced by nitrogen-fixing bacteria (NFB) flow outside the cell. In the present study, the
amt
B gene encoding an ammonium transporter (AmtB) in the genome of NFB strain
Kosakonia radicincitans
GXGL-4A was deleted and the △
amt
B mutant was characterized. The results showed that deletion of the
amt
B gene had no influence on the growth of bacterial cells. The extracellular ammonium nitrogen (NH
4
+
) content of the △
amt
B mutant under nitrogen-free culture conditions was significantly higher than that of the wild-type strain GXGL-4A (WT-GXGL-4A), suggesting disruption of NH
4
+
transport. Meanwhile, the plant growth-promoting effect in cucumber seedlings was visualized after fertilization using cells of the △
amt
B mutant. NFB fertilization continuously increased the cucumber rhizosphere soil pH. The nitrate nitrogen (NO
3
−
) content in soil in the △
amt
B treatment group was significantly higher than that in the WT-GXGL-4A treatment group in the short term but there was no difference in soil NH
4
+
contents between groups. Soil enzymatic activities varied during a 45-day assessment period, indicating that △
amt
B fertilization influenced soil nitrogen cycling in the cucumber rhizosphere. The results will provide a solid foundation for developing the NFB GXGL-4A into an efficient biofertilizer agent.</abstract><cop>New York</cop><pub>Springer US</pub><pmid>36588112</pmid><doi>10.1007/s00284-022-03160-5</doi></addata></record> |
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ispartof | Current microbiology, 2023-02, Vol.80 (2), p.58, Article 58 |
issn | 0343-8651 1432-0991 |
language | eng |
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source | MEDLINE; SpringerLink Journals - AutoHoldings |
subjects | Ammonium Ammonium Compounds Ammonium transporter Bacteria Bacteria - metabolism Biofertilizers Biomedical and Life Sciences Biotechnology Cell culture Crop production Crop yield Cucumbers Cucumis sativus Deletion mutant Enzymatic activity Fertilization Fertilizers Fertilizers - analysis Gene deletion Genomes Kosakonia radicincitans Life Sciences Membrane Transport Proteins Microbiology Mutants Nitrates Nitrogen Nitrogen - metabolism Nitrogen cycle Nitrogen fixation Nitrogen-Fixing Bacteria Nitrogenation Plant growth Pollution control Rhizosphere Seedlings Soil - chemistry Soil pH Soil pollution Soil water Soils Water pollution |
title | Construction, Characterization, and Application of an Ammonium Transporter (AmtB) Deletion Mutant of the Nitrogen-Fixing Bacterium Kosakonia radicincitans GXGL-4A in Cucumis sativus L. Seedlings |
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