Coordination effects on the binding of late 3d single metal species to cyanographene
Anchoring single metal atoms on suitable substrates is a convenient route towards materials with unique electronic and magnetic properties exploitable in a wide range of applications including sensors, data storage, and single atom catalysis (SAC). Among a large portfolio of available substrates, ca...
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creator | Pr cha, Róbert Hrubý, Vít zslav Zaoralová, Dagmar Otyepková, Eva Šedajová, Veronika Kola ík, Jan Zbo il, Radek Medved', Miroslav Otyepka, Michal |
description | Anchoring single metal atoms on suitable substrates is a convenient route towards materials with unique electronic and magnetic properties exploitable in a wide range of applications including sensors, data storage, and single atom catalysis (SAC). Among a large portfolio of available substrates, carbon-based materials derived from graphene and its derivatives have received growing concern due to their high affinity to metals combined with biocompatibility, low toxicity, and accessibility. Cyanographene (GCN) as highly functionalized graphene containing homogeneously distributed nitrile groups perpendicular to the surface offers exceptionally favourable arrangement for anchoring metal atoms enabling efficient charge exchange between the metal and the substrate. However, the binding characteristics of metal species can be significantly affected by the coordination effects. Here we employed density functional theory (DFT) calculations to analyse the role of coordination in the binding of late 3d cations (Fe
2+
, Fe
3+
, Co
2+
, Ni
2+
, Cu
2+
, Cu
+
, and Zn
2+
) to GCN in aqueous solutions. The inspection of several plausible coordination types revealed the most favourable arrangements. Among the studied species, copper cations were found to be the most tightly bonded to GCN, which was also confirmed by the X-ray photoelectron spectroscopy (XPS), atomic absorption spectroscopy (AAS), and isothermal titration calorimetry (ITC) measurements. In general, the inclusion of coordination effects significantly reduced the binding affinities predicted by implicit solvation models. Clearly, to build-up reliable models of SAC architectures in the environments enabling the formation of a coordination sphere, such effects need to be properly taken into account.
Coordination significantly affects the stability of single metals anchored to 2D materials. DFT applied to models including a coordination sphere and solvation effects predicts the binding affinities of late 3d cations consistently with experiment. |
doi_str_mv | 10.1039/d2cp04076j |
format | Article |
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2+
, Fe
3+
, Co
2+
, Ni
2+
, Cu
2+
, Cu
+
, and Zn
2+
) to GCN in aqueous solutions. The inspection of several plausible coordination types revealed the most favourable arrangements. Among the studied species, copper cations were found to be the most tightly bonded to GCN, which was also confirmed by the X-ray photoelectron spectroscopy (XPS), atomic absorption spectroscopy (AAS), and isothermal titration calorimetry (ITC) measurements. In general, the inclusion of coordination effects significantly reduced the binding affinities predicted by implicit solvation models. Clearly, to build-up reliable models of SAC architectures in the environments enabling the formation of a coordination sphere, such effects need to be properly taken into account.
Coordination significantly affects the stability of single metals anchored to 2D materials. DFT applied to models including a coordination sphere and solvation effects predicts the binding affinities of late 3d cations consistently with experiment.</description><identifier>ISSN: 1463-9076</identifier><identifier>EISSN: 1463-9084</identifier><identifier>DOI: 10.1039/d2cp04076j</identifier><identifier>PMID: 36475541</identifier><language>eng</language><publisher>England: Royal Society of Chemistry</publisher><subject>Absorption spectroscopy ; Affinity ; Aqueous solutions ; Binding ; Biocompatibility ; Bonding strength ; Cations ; Charge exchange ; Chemistry ; Cobalt ; Coordination ; Copper ; Copper - chemistry ; Data storage ; Density functional theory ; Graphene ; Graphite ; Inspection ; Magnetic properties ; Metals - chemistry ; Photoelectrons ; Solvation ; Spectrum analysis ; Substrates ; Titration calorimetry ; Toxicity ; X ray photoelectron spectroscopy</subject><ispartof>Physical chemistry chemical physics : PCCP, 2022-12, Vol.25 (1), p.286-296</ispartof><rights>Copyright Royal Society of Chemistry 2023</rights><rights>This journal is © the Owner Societies 2023 The Royal Society of Chemistry</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c358t-f9880e44a85f69012ccb3b3b250d63bbb3d26d9869c6bf079976f502a5c9aa603</citedby><cites>FETCH-LOGICAL-c358t-f9880e44a85f69012ccb3b3b250d63bbb3d26d9869c6bf079976f502a5c9aa603</cites><orcidid>0000-0002-0432-4868 ; 0000-0001-8599-1031 ; 0000-0002-3147-2196 ; 0000-0002-1635-1206 ; 0000-0002-1066-5677</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>230,314,776,780,881,27901,27902</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/36475541$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Pr cha, Róbert</creatorcontrib><creatorcontrib>Hrubý, Vít zslav</creatorcontrib><creatorcontrib>Zaoralová, Dagmar</creatorcontrib><creatorcontrib>Otyepková, Eva</creatorcontrib><creatorcontrib>Šedajová, Veronika</creatorcontrib><creatorcontrib>Kola ík, Jan</creatorcontrib><creatorcontrib>Zbo il, Radek</creatorcontrib><creatorcontrib>Medved', Miroslav</creatorcontrib><creatorcontrib>Otyepka, Michal</creatorcontrib><title>Coordination effects on the binding of late 3d single metal species to cyanographene</title><title>Physical chemistry chemical physics : PCCP</title><addtitle>Phys Chem Chem Phys</addtitle><description>Anchoring single metal atoms on suitable substrates is a convenient route towards materials with unique electronic and magnetic properties exploitable in a wide range of applications including sensors, data storage, and single atom catalysis (SAC). Among a large portfolio of available substrates, carbon-based materials derived from graphene and its derivatives have received growing concern due to their high affinity to metals combined with biocompatibility, low toxicity, and accessibility. Cyanographene (GCN) as highly functionalized graphene containing homogeneously distributed nitrile groups perpendicular to the surface offers exceptionally favourable arrangement for anchoring metal atoms enabling efficient charge exchange between the metal and the substrate. However, the binding characteristics of metal species can be significantly affected by the coordination effects. Here we employed density functional theory (DFT) calculations to analyse the role of coordination in the binding of late 3d cations (Fe
2+
, Fe
3+
, Co
2+
, Ni
2+
, Cu
2+
, Cu
+
, and Zn
2+
) to GCN in aqueous solutions. The inspection of several plausible coordination types revealed the most favourable arrangements. Among the studied species, copper cations were found to be the most tightly bonded to GCN, which was also confirmed by the X-ray photoelectron spectroscopy (XPS), atomic absorption spectroscopy (AAS), and isothermal titration calorimetry (ITC) measurements. In general, the inclusion of coordination effects significantly reduced the binding affinities predicted by implicit solvation models. Clearly, to build-up reliable models of SAC architectures in the environments enabling the formation of a coordination sphere, such effects need to be properly taken into account.
Coordination significantly affects the stability of single metals anchored to 2D materials. DFT applied to models including a coordination sphere and solvation effects predicts the binding affinities of late 3d cations consistently with experiment.</description><subject>Absorption spectroscopy</subject><subject>Affinity</subject><subject>Aqueous solutions</subject><subject>Binding</subject><subject>Biocompatibility</subject><subject>Bonding strength</subject><subject>Cations</subject><subject>Charge exchange</subject><subject>Chemistry</subject><subject>Cobalt</subject><subject>Coordination</subject><subject>Copper</subject><subject>Copper - chemistry</subject><subject>Data storage</subject><subject>Density functional theory</subject><subject>Graphene</subject><subject>Graphite</subject><subject>Inspection</subject><subject>Magnetic properties</subject><subject>Metals - chemistry</subject><subject>Photoelectrons</subject><subject>Solvation</subject><subject>Spectrum analysis</subject><subject>Substrates</subject><subject>Titration calorimetry</subject><subject>Toxicity</subject><subject>X ray photoelectron spectroscopy</subject><issn>1463-9076</issn><issn>1463-9084</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2022</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNpVkc9LwzAUx4MoTqcX70rAm1BNmiZtLoLU3wz0MM8hTZOto2tqkgn7741uVuUd3gvfD9_3yBeAE4wuMSL8qk5VjzKUs8UOOMAZIwlHRbY7zDkbgUPvFwghTDHZByPCspzSDB-AaWmtq5tOhsZ2UBujVfAwjmGuYdV0UZpBa2Arg4akhj6-Ww2XOsgW-l6rRnsYLFRr2dmZk_1cd_oI7BnZen287WPwdn83LR-TycvDU3kzSRShRUgMLwqks0wW1DCOcKpURWKlFNWMVFVF6pTVvGBcscqgnPOcGYpSSRWXkiEyBtcb335VLXWtdBecbEXvmqV0a2FlI_4rXTMXM_shOMcEp0U0ON8aOPu-0j6IhV25Lt4s0pwylGPMSKQuNpRy1nunzbABI_GVgLhNy9fvBJ4jfPb3pgH9-fIInG4A59Wg_kZIPgHamIus</recordid><startdate>20221221</startdate><enddate>20221221</enddate><creator>Pr cha, Róbert</creator><creator>Hrubý, Vít zslav</creator><creator>Zaoralová, Dagmar</creator><creator>Otyepková, Eva</creator><creator>Šedajová, Veronika</creator><creator>Kola ík, Jan</creator><creator>Zbo il, Radek</creator><creator>Medved', Miroslav</creator><creator>Otyepka, Michal</creator><general>Royal Society of Chemistry</general><general>The Royal Society of Chemistry</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7SR</scope><scope>7U5</scope><scope>8BQ</scope><scope>8FD</scope><scope>JG9</scope><scope>L7M</scope><scope>5PM</scope><orcidid>https://orcid.org/0000-0002-0432-4868</orcidid><orcidid>https://orcid.org/0000-0001-8599-1031</orcidid><orcidid>https://orcid.org/0000-0002-3147-2196</orcidid><orcidid>https://orcid.org/0000-0002-1635-1206</orcidid><orcidid>https://orcid.org/0000-0002-1066-5677</orcidid></search><sort><creationdate>20221221</creationdate><title>Coordination effects on the binding of late 3d single metal species to cyanographene</title><author>Pr cha, Róbert ; Hrubý, Vít zslav ; Zaoralová, Dagmar ; Otyepková, Eva ; Šedajová, Veronika ; Kola ík, Jan ; Zbo il, Radek ; Medved', Miroslav ; Otyepka, Michal</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c358t-f9880e44a85f69012ccb3b3b250d63bbb3d26d9869c6bf079976f502a5c9aa603</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2022</creationdate><topic>Absorption spectroscopy</topic><topic>Affinity</topic><topic>Aqueous solutions</topic><topic>Binding</topic><topic>Biocompatibility</topic><topic>Bonding strength</topic><topic>Cations</topic><topic>Charge exchange</topic><topic>Chemistry</topic><topic>Cobalt</topic><topic>Coordination</topic><topic>Copper</topic><topic>Copper - chemistry</topic><topic>Data storage</topic><topic>Density functional theory</topic><topic>Graphene</topic><topic>Graphite</topic><topic>Inspection</topic><topic>Magnetic properties</topic><topic>Metals - chemistry</topic><topic>Photoelectrons</topic><topic>Solvation</topic><topic>Spectrum analysis</topic><topic>Substrates</topic><topic>Titration calorimetry</topic><topic>Toxicity</topic><topic>X ray photoelectron spectroscopy</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Pr cha, Róbert</creatorcontrib><creatorcontrib>Hrubý, Vít zslav</creatorcontrib><creatorcontrib>Zaoralová, Dagmar</creatorcontrib><creatorcontrib>Otyepková, Eva</creatorcontrib><creatorcontrib>Šedajová, Veronika</creatorcontrib><creatorcontrib>Kola ík, Jan</creatorcontrib><creatorcontrib>Zbo il, Radek</creatorcontrib><creatorcontrib>Medved', Miroslav</creatorcontrib><creatorcontrib>Otyepka, Michal</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Engineered Materials Abstracts</collection><collection>Solid State and Superconductivity Abstracts</collection><collection>METADEX</collection><collection>Technology Research Database</collection><collection>Materials Research Database</collection><collection>Advanced Technologies Database with Aerospace</collection><collection>PubMed Central (Full Participant titles)</collection><jtitle>Physical chemistry chemical physics : PCCP</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Pr cha, Róbert</au><au>Hrubý, Vít zslav</au><au>Zaoralová, Dagmar</au><au>Otyepková, Eva</au><au>Šedajová, Veronika</au><au>Kola ík, Jan</au><au>Zbo il, Radek</au><au>Medved', Miroslav</au><au>Otyepka, Michal</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Coordination effects on the binding of late 3d single metal species to cyanographene</atitle><jtitle>Physical chemistry chemical physics : PCCP</jtitle><addtitle>Phys Chem Chem Phys</addtitle><date>2022-12-21</date><risdate>2022</risdate><volume>25</volume><issue>1</issue><spage>286</spage><epage>296</epage><pages>286-296</pages><issn>1463-9076</issn><eissn>1463-9084</eissn><abstract>Anchoring single metal atoms on suitable substrates is a convenient route towards materials with unique electronic and magnetic properties exploitable in a wide range of applications including sensors, data storage, and single atom catalysis (SAC). Among a large portfolio of available substrates, carbon-based materials derived from graphene and its derivatives have received growing concern due to their high affinity to metals combined with biocompatibility, low toxicity, and accessibility. Cyanographene (GCN) as highly functionalized graphene containing homogeneously distributed nitrile groups perpendicular to the surface offers exceptionally favourable arrangement for anchoring metal atoms enabling efficient charge exchange between the metal and the substrate. However, the binding characteristics of metal species can be significantly affected by the coordination effects. Here we employed density functional theory (DFT) calculations to analyse the role of coordination in the binding of late 3d cations (Fe
2+
, Fe
3+
, Co
2+
, Ni
2+
, Cu
2+
, Cu
+
, and Zn
2+
) to GCN in aqueous solutions. The inspection of several plausible coordination types revealed the most favourable arrangements. Among the studied species, copper cations were found to be the most tightly bonded to GCN, which was also confirmed by the X-ray photoelectron spectroscopy (XPS), atomic absorption spectroscopy (AAS), and isothermal titration calorimetry (ITC) measurements. In general, the inclusion of coordination effects significantly reduced the binding affinities predicted by implicit solvation models. Clearly, to build-up reliable models of SAC architectures in the environments enabling the formation of a coordination sphere, such effects need to be properly taken into account.
Coordination significantly affects the stability of single metals anchored to 2D materials. DFT applied to models including a coordination sphere and solvation effects predicts the binding affinities of late 3d cations consistently with experiment.</abstract><cop>England</cop><pub>Royal Society of Chemistry</pub><pmid>36475541</pmid><doi>10.1039/d2cp04076j</doi><tpages>11</tpages><orcidid>https://orcid.org/0000-0002-0432-4868</orcidid><orcidid>https://orcid.org/0000-0001-8599-1031</orcidid><orcidid>https://orcid.org/0000-0002-3147-2196</orcidid><orcidid>https://orcid.org/0000-0002-1635-1206</orcidid><orcidid>https://orcid.org/0000-0002-1066-5677</orcidid><oa>free_for_read</oa></addata></record> |
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subjects | Absorption spectroscopy Affinity Aqueous solutions Binding Biocompatibility Bonding strength Cations Charge exchange Chemistry Cobalt Coordination Copper Copper - chemistry Data storage Density functional theory Graphene Graphite Inspection Magnetic properties Metals - chemistry Photoelectrons Solvation Spectrum analysis Substrates Titration calorimetry Toxicity X ray photoelectron spectroscopy |
title | Coordination effects on the binding of late 3d single metal species to cyanographene |
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