An RNA G‐Quadruplex Structure within the ADAR 5′UTR Interacts with DHX36 Helicase to Regulate Translation
RNA G‐quadruplex (rG4) structures in the 5′ untranslated region (5′UTR) play crucial roles in fundamental cellular processes. ADAR is an important enzyme that binds to double‐strand RNA and accounts for the conversion of Adenosine to Inosine in RNA editing. However, so far there is no report on the...
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creator | Lyu, Kaixin Chen, Shuo‐Bin Chow, Eugene Yui‐Ching Zhao, Haizhou Yuan, Jia‐Hao Cai, Meng Shi, Jiahai Chan, Ting‐Fung Tan, Jia‐Heng Kwok, Chun Kit |
description | RNA G‐quadruplex (rG4) structures in the 5′ untranslated region (5′UTR) play crucial roles in fundamental cellular processes. ADAR is an important enzyme that binds to double‐strand RNA and accounts for the conversion of Adenosine to Inosine in RNA editing. However, so far there is no report on the formation and regulatory role of rG4 on ADAR expression. Here, we identify and characterize a thermostable rG4 structure within the 5′UTR of the ADAR1 mRNA and demonstrate its formation and inhibitory role on translation in reporter gene and native gene constructs. We reveal rG4‐specific helicase DHX36 interacts with this rG4 in vitro and in cells under knockdown and knockout conditions by GTFH (G‐quadruplex‐triggered fluorogenic hybridization) probes and modulates translation in an rG4‐dependent manner. Our results further substantiate the rG4 structure‐DHX36 protein interaction in cells and highlight rG4 to be a key player in controlling ADAR1 translation.
An RNA G‐quadruplex (rG4) structure was identified in the 5′UTR of the ADAR1 mRNA using multi‐disciplinary assays in vitro and cells. The binding and resolving effect of rG4‐specific helicase DHX36 on this rG4 was monitored using G‐quadruplex‐triggered fluorogenic hybridization (GTFH) probe. Functionally, ADAR1 5′UTR rG4 inhibits reporter gene and native transcript translation with DHX36 modulating its formation in cells. |
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An RNA G‐quadruplex (rG4) structure was identified in the 5′UTR of the ADAR1 mRNA using multi‐disciplinary assays in vitro and cells. The binding and resolving effect of rG4‐specific helicase DHX36 on this rG4 was monitored using G‐quadruplex‐triggered fluorogenic hybridization (GTFH) probe. Functionally, ADAR1 5′UTR rG4 inhibits reporter gene and native transcript translation with DHX36 modulating its formation in cells.</description><edition>International ed. in English</edition><identifier>ISSN: 1433-7851</identifier><identifier>EISSN: 1521-3773</identifier><identifier>DOI: 10.1002/anie.202203553</identifier><language>eng</language><publisher>Weinheim: Wiley Subscription Services, Inc</publisher><subject>5' Untranslated Regions ; ADAR ; Adenosine ; DHX36 ; DNA helicase ; DNA probes ; Gene Expression ; Hybridization ; mRNA ; Protein structure ; Reporter gene ; Ribonucleic acid ; RNA ; RNA editing ; RNA G-Quadruplex ; RNA helicase ; Structure-Function Relationship ; Translation</subject><ispartof>Angewandte Chemie International Edition, 2022-12, Vol.61 (52), p.n/a</ispartof><rights>2022 Wiley‐VCH GmbH</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c3173-b182d8d4f823c987cf54a5e28dd5343fbb75bf92d4c0dfe921c0bef5cb3029ae3</citedby><cites>FETCH-LOGICAL-c3173-b182d8d4f823c987cf54a5e28dd5343fbb75bf92d4c0dfe921c0bef5cb3029ae3</cites><orcidid>0000-0002-0489-3884 ; 0000-0001-9118-2185 ; 0000-0002-5575-6724 ; 0000-0002-9330-1296 ; 0000-0002-2920-6219 ; 0000-0001-9175-8543 ; 0000-0002-0748-7363 ; 0000-0002-6467-8289 ; 0000-0002-1612-7482</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://onlinelibrary.wiley.com/doi/pdf/10.1002%2Fanie.202203553$$EPDF$$P50$$Gwiley$$H</linktopdf><linktohtml>$$Uhttps://onlinelibrary.wiley.com/doi/full/10.1002%2Fanie.202203553$$EHTML$$P50$$Gwiley$$H</linktohtml><link.rule.ids>314,776,780,1411,27901,27902,45550,45551</link.rule.ids></links><search><creatorcontrib>Lyu, Kaixin</creatorcontrib><creatorcontrib>Chen, Shuo‐Bin</creatorcontrib><creatorcontrib>Chow, Eugene Yui‐Ching</creatorcontrib><creatorcontrib>Zhao, Haizhou</creatorcontrib><creatorcontrib>Yuan, Jia‐Hao</creatorcontrib><creatorcontrib>Cai, Meng</creatorcontrib><creatorcontrib>Shi, Jiahai</creatorcontrib><creatorcontrib>Chan, Ting‐Fung</creatorcontrib><creatorcontrib>Tan, Jia‐Heng</creatorcontrib><creatorcontrib>Kwok, Chun Kit</creatorcontrib><title>An RNA G‐Quadruplex Structure within the ADAR 5′UTR Interacts with DHX36 Helicase to Regulate Translation</title><title>Angewandte Chemie International Edition</title><description>RNA G‐quadruplex (rG4) structures in the 5′ untranslated region (5′UTR) play crucial roles in fundamental cellular processes. ADAR is an important enzyme that binds to double‐strand RNA and accounts for the conversion of Adenosine to Inosine in RNA editing. However, so far there is no report on the formation and regulatory role of rG4 on ADAR expression. Here, we identify and characterize a thermostable rG4 structure within the 5′UTR of the ADAR1 mRNA and demonstrate its formation and inhibitory role on translation in reporter gene and native gene constructs. We reveal rG4‐specific helicase DHX36 interacts with this rG4 in vitro and in cells under knockdown and knockout conditions by GTFH (G‐quadruplex‐triggered fluorogenic hybridization) probes and modulates translation in an rG4‐dependent manner. Our results further substantiate the rG4 structure‐DHX36 protein interaction in cells and highlight rG4 to be a key player in controlling ADAR1 translation.
An RNA G‐quadruplex (rG4) structure was identified in the 5′UTR of the ADAR1 mRNA using multi‐disciplinary assays in vitro and cells. The binding and resolving effect of rG4‐specific helicase DHX36 on this rG4 was monitored using G‐quadruplex‐triggered fluorogenic hybridization (GTFH) probe. Functionally, ADAR1 5′UTR rG4 inhibits reporter gene and native transcript translation with DHX36 modulating its formation in cells.</description><subject>5' Untranslated Regions</subject><subject>ADAR</subject><subject>Adenosine</subject><subject>DHX36</subject><subject>DNA helicase</subject><subject>DNA probes</subject><subject>Gene Expression</subject><subject>Hybridization</subject><subject>mRNA</subject><subject>Protein structure</subject><subject>Reporter gene</subject><subject>Ribonucleic acid</subject><subject>RNA</subject><subject>RNA editing</subject><subject>RNA G-Quadruplex</subject><subject>RNA helicase</subject><subject>Structure-Function Relationship</subject><subject>Translation</subject><issn>1433-7851</issn><issn>1521-3773</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2022</creationdate><recordtype>article</recordtype><recordid>eNqFkM1OwkAUhRujiYhuXU_iujg_HWa6bACBhGBESNw10-mtlJQWZ6ZBdjyCz-Ij8SQWMbp0dc_i-85NjufdEtwhGNN7VebQoZhSzDhnZ16LcEp8JgQ7b3LAmC8kJ5felbWrhpcSd1veOirRbBqh4WH_8VSr1NSbAt7RszO1drUBtM3dMi-RWwKK-tEM8cP-czGfoXHpwCjt7DeB-qMX1kUjKHKtLCBXoRm81oVygOZGlbZJeVVeexeZKizc_Ny2t3gYzHsjf_I4HPeiia8ZEcxPiKSpTINMUqZDKXTGA8WByjTlLGBZkgieZCFNA43TDEJKNE4g4zphmIYKWNu7O_VuTPVWg3XxqqpN2byMqeABZlgQ3lCdE6VNZa2BLN6YfK3MLiY4Pk4aHyeNfydthPAkbPMCdv_QcTQdD_7cL4TWfAg</recordid><startdate>20221223</startdate><enddate>20221223</enddate><creator>Lyu, Kaixin</creator><creator>Chen, Shuo‐Bin</creator><creator>Chow, Eugene Yui‐Ching</creator><creator>Zhao, Haizhou</creator><creator>Yuan, Jia‐Hao</creator><creator>Cai, Meng</creator><creator>Shi, Jiahai</creator><creator>Chan, Ting‐Fung</creator><creator>Tan, Jia‐Heng</creator><creator>Kwok, Chun Kit</creator><general>Wiley Subscription Services, Inc</general><scope>AAYXX</scope><scope>CITATION</scope><scope>7TM</scope><scope>K9.</scope><orcidid>https://orcid.org/0000-0002-0489-3884</orcidid><orcidid>https://orcid.org/0000-0001-9118-2185</orcidid><orcidid>https://orcid.org/0000-0002-5575-6724</orcidid><orcidid>https://orcid.org/0000-0002-9330-1296</orcidid><orcidid>https://orcid.org/0000-0002-2920-6219</orcidid><orcidid>https://orcid.org/0000-0001-9175-8543</orcidid><orcidid>https://orcid.org/0000-0002-0748-7363</orcidid><orcidid>https://orcid.org/0000-0002-6467-8289</orcidid><orcidid>https://orcid.org/0000-0002-1612-7482</orcidid></search><sort><creationdate>20221223</creationdate><title>An RNA G‐Quadruplex Structure within the ADAR 5′UTR Interacts with DHX36 Helicase to Regulate Translation</title><author>Lyu, Kaixin ; Chen, Shuo‐Bin ; Chow, Eugene Yui‐Ching ; Zhao, Haizhou ; Yuan, Jia‐Hao ; Cai, Meng ; Shi, Jiahai ; Chan, Ting‐Fung ; Tan, Jia‐Heng ; Kwok, Chun Kit</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c3173-b182d8d4f823c987cf54a5e28dd5343fbb75bf92d4c0dfe921c0bef5cb3029ae3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2022</creationdate><topic>5' Untranslated Regions</topic><topic>ADAR</topic><topic>Adenosine</topic><topic>DHX36</topic><topic>DNA helicase</topic><topic>DNA probes</topic><topic>Gene Expression</topic><topic>Hybridization</topic><topic>mRNA</topic><topic>Protein structure</topic><topic>Reporter gene</topic><topic>Ribonucleic acid</topic><topic>RNA</topic><topic>RNA editing</topic><topic>RNA G-Quadruplex</topic><topic>RNA helicase</topic><topic>Structure-Function Relationship</topic><topic>Translation</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Lyu, Kaixin</creatorcontrib><creatorcontrib>Chen, Shuo‐Bin</creatorcontrib><creatorcontrib>Chow, Eugene Yui‐Ching</creatorcontrib><creatorcontrib>Zhao, Haizhou</creatorcontrib><creatorcontrib>Yuan, Jia‐Hao</creatorcontrib><creatorcontrib>Cai, Meng</creatorcontrib><creatorcontrib>Shi, Jiahai</creatorcontrib><creatorcontrib>Chan, Ting‐Fung</creatorcontrib><creatorcontrib>Tan, Jia‐Heng</creatorcontrib><creatorcontrib>Kwok, Chun Kit</creatorcontrib><collection>CrossRef</collection><collection>Nucleic Acids Abstracts</collection><collection>ProQuest Health & Medical Complete (Alumni)</collection><jtitle>Angewandte Chemie International Edition</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Lyu, Kaixin</au><au>Chen, Shuo‐Bin</au><au>Chow, Eugene Yui‐Ching</au><au>Zhao, Haizhou</au><au>Yuan, Jia‐Hao</au><au>Cai, Meng</au><au>Shi, Jiahai</au><au>Chan, Ting‐Fung</au><au>Tan, Jia‐Heng</au><au>Kwok, Chun Kit</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>An RNA G‐Quadruplex Structure within the ADAR 5′UTR Interacts with DHX36 Helicase to Regulate Translation</atitle><jtitle>Angewandte Chemie International Edition</jtitle><date>2022-12-23</date><risdate>2022</risdate><volume>61</volume><issue>52</issue><epage>n/a</epage><issn>1433-7851</issn><eissn>1521-3773</eissn><abstract>RNA G‐quadruplex (rG4) structures in the 5′ untranslated region (5′UTR) play crucial roles in fundamental cellular processes. ADAR is an important enzyme that binds to double‐strand RNA and accounts for the conversion of Adenosine to Inosine in RNA editing. However, so far there is no report on the formation and regulatory role of rG4 on ADAR expression. Here, we identify and characterize a thermostable rG4 structure within the 5′UTR of the ADAR1 mRNA and demonstrate its formation and inhibitory role on translation in reporter gene and native gene constructs. We reveal rG4‐specific helicase DHX36 interacts with this rG4 in vitro and in cells under knockdown and knockout conditions by GTFH (G‐quadruplex‐triggered fluorogenic hybridization) probes and modulates translation in an rG4‐dependent manner. Our results further substantiate the rG4 structure‐DHX36 protein interaction in cells and highlight rG4 to be a key player in controlling ADAR1 translation.
An RNA G‐quadruplex (rG4) structure was identified in the 5′UTR of the ADAR1 mRNA using multi‐disciplinary assays in vitro and cells. The binding and resolving effect of rG4‐specific helicase DHX36 on this rG4 was monitored using G‐quadruplex‐triggered fluorogenic hybridization (GTFH) probe. Functionally, ADAR1 5′UTR rG4 inhibits reporter gene and native transcript translation with DHX36 modulating its formation in cells.</abstract><cop>Weinheim</cop><pub>Wiley Subscription Services, Inc</pub><doi>10.1002/anie.202203553</doi><tpages>10</tpages><edition>International ed. in English</edition><orcidid>https://orcid.org/0000-0002-0489-3884</orcidid><orcidid>https://orcid.org/0000-0001-9118-2185</orcidid><orcidid>https://orcid.org/0000-0002-5575-6724</orcidid><orcidid>https://orcid.org/0000-0002-9330-1296</orcidid><orcidid>https://orcid.org/0000-0002-2920-6219</orcidid><orcidid>https://orcid.org/0000-0001-9175-8543</orcidid><orcidid>https://orcid.org/0000-0002-0748-7363</orcidid><orcidid>https://orcid.org/0000-0002-6467-8289</orcidid><orcidid>https://orcid.org/0000-0002-1612-7482</orcidid></addata></record> |
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subjects | 5' Untranslated Regions ADAR Adenosine DHX36 DNA helicase DNA probes Gene Expression Hybridization mRNA Protein structure Reporter gene Ribonucleic acid RNA RNA editing RNA G-Quadruplex RNA helicase Structure-Function Relationship Translation |
title | An RNA G‐Quadruplex Structure within the ADAR 5′UTR Interacts with DHX36 Helicase to Regulate Translation |
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