Von Hippel–Lindau (VHL) disease and VHL-associated tumors in Indian subjects: VHL gene testing in a resource constraint setting

Background Von Hippel–Lindau (VHL) syndrome is a familial cancer syndrome caused by mutations in VHL gene. It is characterized by the formation of benign and malignant tumors like retinal angioma, cerebellar hemangioblastoma, spinal hemangioblastoma, renal cell carcinoma, pheochromocytoma, pancreati...

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Veröffentlicht in:Egyptian Journal of Medical Human Genetics 2022-12, Vol.23 (1), p.1-9, Article 126
Hauptverfasser: Dwivedi, Aradhana, Moirangthem, Amita, Pandey, Himani, Sharma, Pankaj, Srivastava, Priyanka, Yadav, Prabhaker, Saxena, Deepti, Phadke, Shubha, Dabadghao, Preeti, Gupta, Neerja, Kabra, Madhulika, Goyal, Rekha, Biswas, Rituparna, Mangaraj, Swayamsidha, Bhar, Debarati, Chowdhury, Subhankar, Agarwal, Amit, Mandal, Kausik
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container_issue 1
container_start_page 1
container_title Egyptian Journal of Medical Human Genetics
container_volume 23
creator Dwivedi, Aradhana
Moirangthem, Amita
Pandey, Himani
Sharma, Pankaj
Srivastava, Priyanka
Yadav, Prabhaker
Saxena, Deepti
Phadke, Shubha
Dabadghao, Preeti
Gupta, Neerja
Kabra, Madhulika
Goyal, Rekha
Biswas, Rituparna
Mangaraj, Swayamsidha
Bhar, Debarati
Chowdhury, Subhankar
Agarwal, Amit
Mandal, Kausik
description Background Von Hippel–Lindau (VHL) syndrome is a familial cancer syndrome caused by mutations in VHL gene. It is characterized by the formation of benign and malignant tumors like retinal angioma, cerebellar hemangioblastoma, spinal hemangioblastoma, renal cell carcinoma, pheochromocytoma, pancreatic and renal cysts, and endolymphatic sac tumors. Germline mutations in VHL gene have also been reported in isolated VHL-associated tumors. VHL gene is a small gene with 3 coding exons and can be easily tested even in a resource constraint setting. Objective To describe clinical presentation and estimate the diagnostic yield of in VHL and VHL-associated tumors. Methods This is a descriptive study in a hospital setting. Here, we describe the clinical and molecular data of 69 patients with suspected VHL or having VHL-associated tumors. Sanger sequencing of coding sequences and conserved splice sites of VHL gene were done in all patients. Multiplex ligation-dependent probe amplification (MLPA) of VHL gene to detect large deletions/duplications was performed for 18 patients with no pathogenic sequence variations. Results Among tumor types at presentation, pheochromocytoma was seen in 49% (34/69), hemangioblastoma was seen in 30% (21/69), and renal cell carcinoma was seen in 7% (5/69). Rest had other tumors like paraganglioma, endolymphatic sac papillary tumors, cerebellar astrocytoma and pancreatic cyst. Seven patients (10%) had more than one tumor at the time of diagnosis. Pathogenic variations in VHL gene were identified in 31probands by Sanger sequencing; 18 were missense, 2 nonsense and 2 small indels. A heterozygous deletion of exon 3 was detected by MLPA in one patient among 18 patients for whom MLPA was done. Overall, the molecular yield was 46% cases (32/69). Family history was present in 7 mutation positive cases (22%). Overall, 11 families (16%) opted for pre-symptomatic mutation testing in the family. Conclusions Mutation testing is indicated in VHL and VHL-associated tumors. The testing facility is easy and can be adopted easily in developing countries like India. The yield is good, and with fairly high incidence of familial cases, molecular testing can help in pre-symptomatic testing and surveillance.
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It is characterized by the formation of benign and malignant tumors like retinal angioma, cerebellar hemangioblastoma, spinal hemangioblastoma, renal cell carcinoma, pheochromocytoma, pancreatic and renal cysts, and endolymphatic sac tumors. Germline mutations in VHL gene have also been reported in isolated VHL-associated tumors. VHL gene is a small gene with 3 coding exons and can be easily tested even in a resource constraint setting. Objective To describe clinical presentation and estimate the diagnostic yield of in VHL and VHL-associated tumors. Methods This is a descriptive study in a hospital setting. Here, we describe the clinical and molecular data of 69 patients with suspected VHL or having VHL-associated tumors. Sanger sequencing of coding sequences and conserved splice sites of VHL gene were done in all patients. Multiplex ligation-dependent probe amplification (MLPA) of VHL gene to detect large deletions/duplications was performed for 18 patients with no pathogenic sequence variations. Results Among tumor types at presentation, pheochromocytoma was seen in 49% (34/69), hemangioblastoma was seen in 30% (21/69), and renal cell carcinoma was seen in 7% (5/69). Rest had other tumors like paraganglioma, endolymphatic sac papillary tumors, cerebellar astrocytoma and pancreatic cyst. Seven patients (10%) had more than one tumor at the time of diagnosis. Pathogenic variations in VHL gene were identified in 31probands by Sanger sequencing; 18 were missense, 2 nonsense and 2 small indels. A heterozygous deletion of exon 3 was detected by MLPA in one patient among 18 patients for whom MLPA was done. Overall, the molecular yield was 46% cases (32/69). Family history was present in 7 mutation positive cases (22%). Overall, 11 families (16%) opted for pre-symptomatic mutation testing in the family. Conclusions Mutation testing is indicated in VHL and VHL-associated tumors. The testing facility is easy and can be adopted easily in developing countries like India. The yield is good, and with fairly high incidence of familial cases, molecular testing can help in pre-symptomatic testing and surveillance.</description><identifier>ISSN: 2090-2441</identifier><identifier>ISSN: 1110-8630</identifier><identifier>EISSN: 2090-2441</identifier><identifier>DOI: 10.1186/s43042-022-00338-1</identifier><language>eng</language><publisher>Berlin/Heidelberg: Springer Berlin Heidelberg</publisher><subject>Astrocytoma ; Brain tumors ; Cancer ; Cerebellum ; Copy number variation ; Developing countries ; DNA sequencing ; Exons ; Gene mutations ; Genes ; Genetic research ; Genetic screening ; Health aspects ; Kidney cancer ; LDCs ; Medicine ; Medicine &amp; Public Health ; Molecular sequencing data ; Mutation ; Nucleotide sequencing ; Pancreas ; Pancreatic carcinoma ; Paraganglioma ; Patients ; Pheochromocytoma ; Renal cell carcinoma ; Tumors ; VHL protein ; Von Hippel-Lindau disease ; Von Hippel–Lindau syndrome</subject><ispartof>Egyptian Journal of Medical Human Genetics, 2022-12, Vol.23 (1), p.1-9, Article 126</ispartof><rights>The Author(s) 2022</rights><rights>COPYRIGHT 2022 Springer</rights><rights>The Author(s) 2022. This work is published under http://creativecommons.org/licenses/by/4.0/ (the “License”). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License.</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><cites>FETCH-LOGICAL-c447t-13088d23d4628380400f4474d240343f590537633738beb2a2926254bec863c03</cites><orcidid>0000-0003-2744-7825</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,776,780,860,27901,27902</link.rule.ids></links><search><creatorcontrib>Dwivedi, Aradhana</creatorcontrib><creatorcontrib>Moirangthem, Amita</creatorcontrib><creatorcontrib>Pandey, Himani</creatorcontrib><creatorcontrib>Sharma, Pankaj</creatorcontrib><creatorcontrib>Srivastava, Priyanka</creatorcontrib><creatorcontrib>Yadav, Prabhaker</creatorcontrib><creatorcontrib>Saxena, Deepti</creatorcontrib><creatorcontrib>Phadke, Shubha</creatorcontrib><creatorcontrib>Dabadghao, Preeti</creatorcontrib><creatorcontrib>Gupta, Neerja</creatorcontrib><creatorcontrib>Kabra, Madhulika</creatorcontrib><creatorcontrib>Goyal, Rekha</creatorcontrib><creatorcontrib>Biswas, Rituparna</creatorcontrib><creatorcontrib>Mangaraj, Swayamsidha</creatorcontrib><creatorcontrib>Bhar, Debarati</creatorcontrib><creatorcontrib>Chowdhury, Subhankar</creatorcontrib><creatorcontrib>Agarwal, Amit</creatorcontrib><creatorcontrib>Mandal, Kausik</creatorcontrib><title>Von Hippel–Lindau (VHL) disease and VHL-associated tumors in Indian subjects: VHL gene testing in a resource constraint setting</title><title>Egyptian Journal of Medical Human Genetics</title><addtitle>Egypt J Med Hum Genet</addtitle><description>Background Von Hippel–Lindau (VHL) syndrome is a familial cancer syndrome caused by mutations in VHL gene. It is characterized by the formation of benign and malignant tumors like retinal angioma, cerebellar hemangioblastoma, spinal hemangioblastoma, renal cell carcinoma, pheochromocytoma, pancreatic and renal cysts, and endolymphatic sac tumors. Germline mutations in VHL gene have also been reported in isolated VHL-associated tumors. VHL gene is a small gene with 3 coding exons and can be easily tested even in a resource constraint setting. Objective To describe clinical presentation and estimate the diagnostic yield of in VHL and VHL-associated tumors. Methods This is a descriptive study in a hospital setting. Here, we describe the clinical and molecular data of 69 patients with suspected VHL or having VHL-associated tumors. Sanger sequencing of coding sequences and conserved splice sites of VHL gene were done in all patients. Multiplex ligation-dependent probe amplification (MLPA) of VHL gene to detect large deletions/duplications was performed for 18 patients with no pathogenic sequence variations. Results Among tumor types at presentation, pheochromocytoma was seen in 49% (34/69), hemangioblastoma was seen in 30% (21/69), and renal cell carcinoma was seen in 7% (5/69). Rest had other tumors like paraganglioma, endolymphatic sac papillary tumors, cerebellar astrocytoma and pancreatic cyst. Seven patients (10%) had more than one tumor at the time of diagnosis. Pathogenic variations in VHL gene were identified in 31probands by Sanger sequencing; 18 were missense, 2 nonsense and 2 small indels. A heterozygous deletion of exon 3 was detected by MLPA in one patient among 18 patients for whom MLPA was done. Overall, the molecular yield was 46% cases (32/69). Family history was present in 7 mutation positive cases (22%). Overall, 11 families (16%) opted for pre-symptomatic mutation testing in the family. Conclusions Mutation testing is indicated in VHL and VHL-associated tumors. The testing facility is easy and can be adopted easily in developing countries like India. The yield is good, and with fairly high incidence of familial cases, molecular testing can help in pre-symptomatic testing and surveillance.</description><subject>Astrocytoma</subject><subject>Brain tumors</subject><subject>Cancer</subject><subject>Cerebellum</subject><subject>Copy number variation</subject><subject>Developing countries</subject><subject>DNA sequencing</subject><subject>Exons</subject><subject>Gene mutations</subject><subject>Genes</subject><subject>Genetic research</subject><subject>Genetic screening</subject><subject>Health aspects</subject><subject>Kidney cancer</subject><subject>LDCs</subject><subject>Medicine</subject><subject>Medicine &amp; Public Health</subject><subject>Molecular sequencing data</subject><subject>Mutation</subject><subject>Nucleotide sequencing</subject><subject>Pancreas</subject><subject>Pancreatic carcinoma</subject><subject>Paraganglioma</subject><subject>Patients</subject><subject>Pheochromocytoma</subject><subject>Renal cell carcinoma</subject><subject>Tumors</subject><subject>VHL protein</subject><subject>Von Hippel-Lindau disease</subject><subject>Von Hippel–Lindau syndrome</subject><issn>2090-2441</issn><issn>1110-8630</issn><issn>2090-2441</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2022</creationdate><recordtype>article</recordtype><sourceid>C6C</sourceid><sourceid>BENPR</sourceid><sourceid>DOA</sourceid><recordid>eNp9Us2KFDEYbETBdfUFPAW86KHX_HV32tuyqDMw4EX3GtLJlybDTDLmSx-86TP4hj6JmW1xFURCSKhUFV-FaprnjF4xpvrXKAWVvKW8biqEatmD5oLTkbZcSvbwj_vj5gnintK-E4O8aL7dpkg24XSCw4-v33chOrOQl7eb3SviAoJBICY6UoHWICYbTAFHynJMGUmIZBtdMJHgMu3BFnxzZpIZIpACWEKczyRDMmBasgViU8SSTYiFIJQz4WnzyJsDwrNf52Xz6d3bjzebdvfh_fbmetdaKYfSMkGVclw42XMlFJWU-vogHZdUSOG7kdZEvRCDUBNM3PCR97yTE1jVC0vFZbNdfV0ye33K4WjyF51M0HdAyrM2uQR7AN1bq4ztbDcxJSkMxk9KTGKaLPWj5756vVi9Tjl9XmpQva_xYh1f84F2nRpFr-5Zs6mmIfpUk9tjQKuvB9aPfBBSVtbVP1h1OTiG-l3gQ8X_EvBVYHNCzOB_h2FUn9ug1zbo2gZ91wbNqkisIqzkOEO-n_g_qp-8x7VH</recordid><startdate>20221201</startdate><enddate>20221201</enddate><creator>Dwivedi, Aradhana</creator><creator>Moirangthem, Amita</creator><creator>Pandey, Himani</creator><creator>Sharma, Pankaj</creator><creator>Srivastava, Priyanka</creator><creator>Yadav, Prabhaker</creator><creator>Saxena, Deepti</creator><creator>Phadke, Shubha</creator><creator>Dabadghao, Preeti</creator><creator>Gupta, Neerja</creator><creator>Kabra, Madhulika</creator><creator>Goyal, Rekha</creator><creator>Biswas, Rituparna</creator><creator>Mangaraj, Swayamsidha</creator><creator>Bhar, Debarati</creator><creator>Chowdhury, Subhankar</creator><creator>Agarwal, Amit</creator><creator>Mandal, Kausik</creator><general>Springer Berlin Heidelberg</general><general>Springer</general><general>Springer Nature B.V</general><general>SpringerOpen</general><scope>C6C</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>3V.</scope><scope>7X7</scope><scope>7XB</scope><scope>8FE</scope><scope>8FH</scope><scope>8FI</scope><scope>8FJ</scope><scope>8FK</scope><scope>ABUWG</scope><scope>AFKRA</scope><scope>AZQEC</scope><scope>BBNVY</scope><scope>BENPR</scope><scope>BHPHI</scope><scope>CCPQU</scope><scope>CWDGH</scope><scope>DWQXO</scope><scope>FYUFA</scope><scope>GHDGH</scope><scope>GNUQQ</scope><scope>HCIFZ</scope><scope>K9.</scope><scope>LK8</scope><scope>M0S</scope><scope>M7P</scope><scope>PIMPY</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>PRINS</scope><scope>DOA</scope><orcidid>https://orcid.org/0000-0003-2744-7825</orcidid></search><sort><creationdate>20221201</creationdate><title>Von Hippel–Lindau (VHL) disease and VHL-associated tumors in Indian subjects: VHL gene testing in a resource constraint setting</title><author>Dwivedi, Aradhana ; Moirangthem, Amita ; Pandey, Himani ; Sharma, Pankaj ; Srivastava, Priyanka ; Yadav, Prabhaker ; Saxena, Deepti ; Phadke, Shubha ; Dabadghao, Preeti ; Gupta, Neerja ; Kabra, Madhulika ; Goyal, Rekha ; Biswas, Rituparna ; Mangaraj, Swayamsidha ; Bhar, Debarati ; Chowdhury, Subhankar ; Agarwal, Amit ; Mandal, Kausik</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c447t-13088d23d4628380400f4474d240343f590537633738beb2a2926254bec863c03</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2022</creationdate><topic>Astrocytoma</topic><topic>Brain tumors</topic><topic>Cancer</topic><topic>Cerebellum</topic><topic>Copy number variation</topic><topic>Developing countries</topic><topic>DNA sequencing</topic><topic>Exons</topic><topic>Gene mutations</topic><topic>Genes</topic><topic>Genetic research</topic><topic>Genetic screening</topic><topic>Health aspects</topic><topic>Kidney cancer</topic><topic>LDCs</topic><topic>Medicine</topic><topic>Medicine &amp; Public Health</topic><topic>Molecular sequencing data</topic><topic>Mutation</topic><topic>Nucleotide sequencing</topic><topic>Pancreas</topic><topic>Pancreatic carcinoma</topic><topic>Paraganglioma</topic><topic>Patients</topic><topic>Pheochromocytoma</topic><topic>Renal cell carcinoma</topic><topic>Tumors</topic><topic>VHL protein</topic><topic>Von Hippel-Lindau disease</topic><topic>Von Hippel–Lindau syndrome</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Dwivedi, Aradhana</creatorcontrib><creatorcontrib>Moirangthem, Amita</creatorcontrib><creatorcontrib>Pandey, Himani</creatorcontrib><creatorcontrib>Sharma, Pankaj</creatorcontrib><creatorcontrib>Srivastava, Priyanka</creatorcontrib><creatorcontrib>Yadav, Prabhaker</creatorcontrib><creatorcontrib>Saxena, Deepti</creatorcontrib><creatorcontrib>Phadke, Shubha</creatorcontrib><creatorcontrib>Dabadghao, Preeti</creatorcontrib><creatorcontrib>Gupta, Neerja</creatorcontrib><creatorcontrib>Kabra, Madhulika</creatorcontrib><creatorcontrib>Goyal, Rekha</creatorcontrib><creatorcontrib>Biswas, Rituparna</creatorcontrib><creatorcontrib>Mangaraj, Swayamsidha</creatorcontrib><creatorcontrib>Bhar, Debarati</creatorcontrib><creatorcontrib>Chowdhury, Subhankar</creatorcontrib><creatorcontrib>Agarwal, Amit</creatorcontrib><creatorcontrib>Mandal, Kausik</creatorcontrib><collection>Springer Nature OA Free Journals</collection><collection>CrossRef</collection><collection>ProQuest Central (Corporate)</collection><collection>Health &amp; 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It is characterized by the formation of benign and malignant tumors like retinal angioma, cerebellar hemangioblastoma, spinal hemangioblastoma, renal cell carcinoma, pheochromocytoma, pancreatic and renal cysts, and endolymphatic sac tumors. Germline mutations in VHL gene have also been reported in isolated VHL-associated tumors. VHL gene is a small gene with 3 coding exons and can be easily tested even in a resource constraint setting. Objective To describe clinical presentation and estimate the diagnostic yield of in VHL and VHL-associated tumors. Methods This is a descriptive study in a hospital setting. Here, we describe the clinical and molecular data of 69 patients with suspected VHL or having VHL-associated tumors. Sanger sequencing of coding sequences and conserved splice sites of VHL gene were done in all patients. Multiplex ligation-dependent probe amplification (MLPA) of VHL gene to detect large deletions/duplications was performed for 18 patients with no pathogenic sequence variations. Results Among tumor types at presentation, pheochromocytoma was seen in 49% (34/69), hemangioblastoma was seen in 30% (21/69), and renal cell carcinoma was seen in 7% (5/69). Rest had other tumors like paraganglioma, endolymphatic sac papillary tumors, cerebellar astrocytoma and pancreatic cyst. Seven patients (10%) had more than one tumor at the time of diagnosis. Pathogenic variations in VHL gene were identified in 31probands by Sanger sequencing; 18 were missense, 2 nonsense and 2 small indels. A heterozygous deletion of exon 3 was detected by MLPA in one patient among 18 patients for whom MLPA was done. Overall, the molecular yield was 46% cases (32/69). Family history was present in 7 mutation positive cases (22%). Overall, 11 families (16%) opted for pre-symptomatic mutation testing in the family. Conclusions Mutation testing is indicated in VHL and VHL-associated tumors. The testing facility is easy and can be adopted easily in developing countries like India. The yield is good, and with fairly high incidence of familial cases, molecular testing can help in pre-symptomatic testing and surveillance.</abstract><cop>Berlin/Heidelberg</cop><pub>Springer Berlin Heidelberg</pub><doi>10.1186/s43042-022-00338-1</doi><tpages>9</tpages><orcidid>https://orcid.org/0000-0003-2744-7825</orcidid><oa>free_for_read</oa></addata></record>
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subjects Astrocytoma
Brain tumors
Cancer
Cerebellum
Copy number variation
Developing countries
DNA sequencing
Exons
Gene mutations
Genes
Genetic research
Genetic screening
Health aspects
Kidney cancer
LDCs
Medicine
Medicine & Public Health
Molecular sequencing data
Mutation
Nucleotide sequencing
Pancreas
Pancreatic carcinoma
Paraganglioma
Patients
Pheochromocytoma
Renal cell carcinoma
Tumors
VHL protein
Von Hippel-Lindau disease
Von Hippel–Lindau syndrome
title Von Hippel–Lindau (VHL) disease and VHL-associated tumors in Indian subjects: VHL gene testing in a resource constraint setting
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