Complex energies and transition dipoles for shape-type resonances of uracil anion from stabilization curves via Padé

Absorption of slow moving electrons by neutral ground state nucleobases has been known to produce resonance metastable states. There are indications that such metastable states may play a key role in DNA/RNA damage. Therefore, herein, we present an ab initio non-Hermitian investigation of the resona...

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Veröffentlicht in:The Journal of chemical physics 2022-05, Vol.156 (19), p.194101-194101
Hauptverfasser: Bouskila, Gal, Landau, Arie, Haritan, Idan, Moiseyev, Nimrod, Bhattacharya, Debarati
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container_end_page 194101
container_issue 19
container_start_page 194101
container_title The Journal of chemical physics
container_volume 156
creator Bouskila, Gal
Landau, Arie
Haritan, Idan
Moiseyev, Nimrod
Bhattacharya, Debarati
description Absorption of slow moving electrons by neutral ground state nucleobases has been known to produce resonance metastable states. There are indications that such metastable states may play a key role in DNA/RNA damage. Therefore, herein, we present an ab initio non-Hermitian investigation of the resonance positions and decay rates for the low lying shape-type states of the uracil anion. In addition, we calculate the complex transition dipoles between these resonance states. We employ the resonance via Padé (RVP) method to calculate these complex properties from real stabilization curves by analytical dilation into the complex plane. This method has already been successfully applied to many small molecular systems, and herein, we present the first application of RVP to a medium-sized system. The presented resonance energies are optimized with respect to the size of the basis set and compared with previous theoretical studies and experimental findings. Complex transition dipoles between the shape-type resonances are computed using the optimal basis set. The ability to calculate ab initio energies and lifetimes of biologically relevant systems paves the way for studying reactions of such systems in which autoionization takes place, while the ability to also calculate their complex transition dipoles opens the door for studying photo-induced dynamics of such biological molecules.
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source AIP Journals Complete; Alma/SFX Local Collection
subjects Anions
Autoionization
Decay rate
Dipoles
Mathematical analysis
Metastable state
Physics
Resonance
Stabilization
Uracil
title Complex energies and transition dipoles for shape-type resonances of uracil anion from stabilization curves via Padé
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