Screening for drought tolerance and diversity analysis of Bangladeshi rice germplasms using morphophysiology and molecular markers

Drought is one of the significant environmental stresses which remarkably reduces crop growth and productivity that ultimately impacts on yield of the crop and thereby reduces the national target of food production throughout the world every year. Therefore, crop genotypes with a tendency of drought...

Ausführliche Beschreibung

Gespeichert in:
Bibliographische Detailangaben
Veröffentlicht in:Biológia 2022, Vol.77 (1), p.21-37
Hauptverfasser: Mas-ud, Md. Atik, Matin, Mohammad Nurul, Fatamatuzzohora, Mst, Ahamed, Md. Sabbir, Chowdhury, Md. Rayhan, Paul, Suman Kumar, Karmakar, Sumon, Kang, Sang Gu, Hossain, Md. Shahadat
Format: Artikel
Sprache:eng
Schlagworte:
Online-Zugang:Volltext
Tags: Tag hinzufügen
Keine Tags, Fügen Sie den ersten Tag hinzu!
container_end_page 37
container_issue 1
container_start_page 21
container_title Biológia
container_volume 77
creator Mas-ud, Md. Atik
Matin, Mohammad Nurul
Fatamatuzzohora, Mst
Ahamed, Md. Sabbir
Chowdhury, Md. Rayhan
Paul, Suman Kumar
Karmakar, Sumon
Kang, Sang Gu
Hossain, Md. Shahadat
description Drought is one of the significant environmental stresses which remarkably reduces crop growth and productivity that ultimately impacts on yield of the crop and thereby reduces the national target of food production throughout the world every year. Therefore, crop genotypes with a tendency of drought tolerance and higher yield, immediately need to be identified to accelerate the breeding effort. In this study, a total of 110 rice genotypes were screened for drought tolerance using Polyethylene Glycol (PEG-6000) treatment at the seedling stage in the growth chamber and water withholding treatment at the vegetative stage in the field. Data were scored and analyzed with a standard evaluation system (SES) for drought tolerance. Among the 110 genotypes, 13 were identified as tolerant, and seven as moderately tolerant to drought stress. For drought control, BRRI Dhan-56 was used as check. The result of the drought tolerance degree (DTD) at the vegetative stage revealed the highest DTD value in Kalara (0.908). Further, screening with drought-linked SSR markers (RM105, RM219, RM328, and RM332) indicated that the RM322 marker identified 14 genotypes that have similar banding patterns with BRRI Dhan-56. The remaining three markers identified 20 genotypes that have similar banding patterns with check variety. The cluster analysis by UPGMA showed that the genotypes Gojja and Payjam (at control condition), as well as Ranashail and Mokbul (at stress condition) are more closely interconnected, but they are distantly related with Kolom, BRRI Dhan-56, and Varat payjam. These tolerant genotypes identified in this study could be used as parents in breeding programs to develop improved drought tolerant rice varieties.
doi_str_mv 10.1007/s11756-021-00923-6
format Article
fullrecord <record><control><sourceid>proquest_cross</sourceid><recordid>TN_cdi_proquest_journals_2617315708</recordid><sourceformat>XML</sourceformat><sourcesystem>PC</sourcesystem><sourcerecordid>2617315708</sourcerecordid><originalsourceid>FETCH-LOGICAL-c319t-500265331859fe57c0879cb67fc33ff12796ba314fa6ca714c2796adc70062623</originalsourceid><addsrcrecordid>eNp9kM1KxDAURoMoOI6-gKuA6-hNM03apQ7-wYALdR0yadJ2bJuatEK3PrmZqeDOVbjh-w73HoQuKVxTAHETKBUpJ5BQApAnjPAjtKCMcZKnnB2jBQBwwiDLTtFZCDuAlUiBLtD3q_bGdHVXYus8Lrwby2rAg2uMV502WHUFLuov40M9THFSzRTqgJ3Fd6orG1WYUNXY1zFaGt_2jQptwGPYE1vn-8r1VWy4xpXTAdZGtB4b5XGr_EfknqMTq5pgLn7fJXp_uH9bP5HNy-Pz-nZDNKP5QFKAhKeM0SzNrUmFhkzkesuF1YxZSxOR861idGUV10rQld7_qEKLeHrCE7ZEVzO39-5zNGGQOzf6eFCQCaeC0VRAFlPJnNLeheCNlb2v46aTpCD3ruXsWkbX8uBa8lhicynEcBc9_KH_af0AavCEJQ</addsrcrecordid><sourcetype>Aggregation Database</sourcetype><iscdi>true</iscdi><recordtype>article</recordtype><pqid>2617315708</pqid></control><display><type>article</type><title>Screening for drought tolerance and diversity analysis of Bangladeshi rice germplasms using morphophysiology and molecular markers</title><source>SpringerLink Journals - AutoHoldings</source><creator>Mas-ud, Md. Atik ; Matin, Mohammad Nurul ; Fatamatuzzohora, Mst ; Ahamed, Md. Sabbir ; Chowdhury, Md. Rayhan ; Paul, Suman Kumar ; Karmakar, Sumon ; Kang, Sang Gu ; Hossain, Md. Shahadat</creator><creatorcontrib>Mas-ud, Md. Atik ; Matin, Mohammad Nurul ; Fatamatuzzohora, Mst ; Ahamed, Md. Sabbir ; Chowdhury, Md. Rayhan ; Paul, Suman Kumar ; Karmakar, Sumon ; Kang, Sang Gu ; Hossain, Md. Shahadat</creatorcontrib><description>Drought is one of the significant environmental stresses which remarkably reduces crop growth and productivity that ultimately impacts on yield of the crop and thereby reduces the national target of food production throughout the world every year. Therefore, crop genotypes with a tendency of drought tolerance and higher yield, immediately need to be identified to accelerate the breeding effort. In this study, a total of 110 rice genotypes were screened for drought tolerance using Polyethylene Glycol (PEG-6000) treatment at the seedling stage in the growth chamber and water withholding treatment at the vegetative stage in the field. Data were scored and analyzed with a standard evaluation system (SES) for drought tolerance. Among the 110 genotypes, 13 were identified as tolerant, and seven as moderately tolerant to drought stress. For drought control, BRRI Dhan-56 was used as check. The result of the drought tolerance degree (DTD) at the vegetative stage revealed the highest DTD value in Kalara (0.908). Further, screening with drought-linked SSR markers (RM105, RM219, RM328, and RM332) indicated that the RM322 marker identified 14 genotypes that have similar banding patterns with BRRI Dhan-56. The remaining three markers identified 20 genotypes that have similar banding patterns with check variety. The cluster analysis by UPGMA showed that the genotypes Gojja and Payjam (at control condition), as well as Ranashail and Mokbul (at stress condition) are more closely interconnected, but they are distantly related with Kolom, BRRI Dhan-56, and Varat payjam. These tolerant genotypes identified in this study could be used as parents in breeding programs to develop improved drought tolerant rice varieties.</description><identifier>ISSN: 0006-3088</identifier><identifier>EISSN: 1336-9563</identifier><identifier>DOI: 10.1007/s11756-021-00923-6</identifier><language>eng</language><publisher>Cham: Springer International Publishing</publisher><subject>Biomedical and Life Sciences ; Breeding ; Cell Biology ; Cluster analysis ; Crop growth ; Crops ; Drought ; Drought resistance ; Environmental stress ; Food production ; Genotypes ; Growth chambers ; Life Sciences ; Markers ; Microbiology ; Original Article ; Plant Sciences ; Polyethylene glycol ; Rice ; Screening ; Seedlings ; Zoology</subject><ispartof>Biológia, 2022, Vol.77 (1), p.21-37</ispartof><rights>Plant Science and Biodiversity Centre, Slovak Academy of Sciences 2021</rights><rights>Plant Science and Biodiversity Centre, Slovak Academy of Sciences 2021.</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c319t-500265331859fe57c0879cb67fc33ff12796ba314fa6ca714c2796adc70062623</citedby><cites>FETCH-LOGICAL-c319t-500265331859fe57c0879cb67fc33ff12796ba314fa6ca714c2796adc70062623</cites><orcidid>0000-0001-5243-0916 ; 0000-0002-5216-5494 ; 0000-0002-4677-1404 ; 0000-0002-3594-2570 ; 0000-0003-4228-2395</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://link.springer.com/content/pdf/10.1007/s11756-021-00923-6$$EPDF$$P50$$Gspringer$$H</linktopdf><linktohtml>$$Uhttps://link.springer.com/10.1007/s11756-021-00923-6$$EHTML$$P50$$Gspringer$$H</linktohtml><link.rule.ids>314,776,780,27903,27904,41467,42536,51298</link.rule.ids></links><search><creatorcontrib>Mas-ud, Md. Atik</creatorcontrib><creatorcontrib>Matin, Mohammad Nurul</creatorcontrib><creatorcontrib>Fatamatuzzohora, Mst</creatorcontrib><creatorcontrib>Ahamed, Md. Sabbir</creatorcontrib><creatorcontrib>Chowdhury, Md. Rayhan</creatorcontrib><creatorcontrib>Paul, Suman Kumar</creatorcontrib><creatorcontrib>Karmakar, Sumon</creatorcontrib><creatorcontrib>Kang, Sang Gu</creatorcontrib><creatorcontrib>Hossain, Md. Shahadat</creatorcontrib><title>Screening for drought tolerance and diversity analysis of Bangladeshi rice germplasms using morphophysiology and molecular markers</title><title>Biológia</title><addtitle>Biologia</addtitle><description>Drought is one of the significant environmental stresses which remarkably reduces crop growth and productivity that ultimately impacts on yield of the crop and thereby reduces the national target of food production throughout the world every year. Therefore, crop genotypes with a tendency of drought tolerance and higher yield, immediately need to be identified to accelerate the breeding effort. In this study, a total of 110 rice genotypes were screened for drought tolerance using Polyethylene Glycol (PEG-6000) treatment at the seedling stage in the growth chamber and water withholding treatment at the vegetative stage in the field. Data were scored and analyzed with a standard evaluation system (SES) for drought tolerance. Among the 110 genotypes, 13 were identified as tolerant, and seven as moderately tolerant to drought stress. For drought control, BRRI Dhan-56 was used as check. The result of the drought tolerance degree (DTD) at the vegetative stage revealed the highest DTD value in Kalara (0.908). Further, screening with drought-linked SSR markers (RM105, RM219, RM328, and RM332) indicated that the RM322 marker identified 14 genotypes that have similar banding patterns with BRRI Dhan-56. The remaining three markers identified 20 genotypes that have similar banding patterns with check variety. The cluster analysis by UPGMA showed that the genotypes Gojja and Payjam (at control condition), as well as Ranashail and Mokbul (at stress condition) are more closely interconnected, but they are distantly related with Kolom, BRRI Dhan-56, and Varat payjam. These tolerant genotypes identified in this study could be used as parents in breeding programs to develop improved drought tolerant rice varieties.</description><subject>Biomedical and Life Sciences</subject><subject>Breeding</subject><subject>Cell Biology</subject><subject>Cluster analysis</subject><subject>Crop growth</subject><subject>Crops</subject><subject>Drought</subject><subject>Drought resistance</subject><subject>Environmental stress</subject><subject>Food production</subject><subject>Genotypes</subject><subject>Growth chambers</subject><subject>Life Sciences</subject><subject>Markers</subject><subject>Microbiology</subject><subject>Original Article</subject><subject>Plant Sciences</subject><subject>Polyethylene glycol</subject><subject>Rice</subject><subject>Screening</subject><subject>Seedlings</subject><subject>Zoology</subject><issn>0006-3088</issn><issn>1336-9563</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2022</creationdate><recordtype>article</recordtype><recordid>eNp9kM1KxDAURoMoOI6-gKuA6-hNM03apQ7-wYALdR0yadJ2bJuatEK3PrmZqeDOVbjh-w73HoQuKVxTAHETKBUpJ5BQApAnjPAjtKCMcZKnnB2jBQBwwiDLTtFZCDuAlUiBLtD3q_bGdHVXYus8Lrwby2rAg2uMV502WHUFLuov40M9THFSzRTqgJ3Fd6orG1WYUNXY1zFaGt_2jQptwGPYE1vn-8r1VWy4xpXTAdZGtB4b5XGr_EfknqMTq5pgLn7fJXp_uH9bP5HNy-Pz-nZDNKP5QFKAhKeM0SzNrUmFhkzkesuF1YxZSxOR861idGUV10rQld7_qEKLeHrCE7ZEVzO39-5zNGGQOzf6eFCQCaeC0VRAFlPJnNLeheCNlb2v46aTpCD3ruXsWkbX8uBa8lhicynEcBc9_KH_af0AavCEJQ</recordid><startdate>2022</startdate><enddate>2022</enddate><creator>Mas-ud, Md. Atik</creator><creator>Matin, Mohammad Nurul</creator><creator>Fatamatuzzohora, Mst</creator><creator>Ahamed, Md. Sabbir</creator><creator>Chowdhury, Md. Rayhan</creator><creator>Paul, Suman Kumar</creator><creator>Karmakar, Sumon</creator><creator>Kang, Sang Gu</creator><creator>Hossain, Md. Shahadat</creator><general>Springer International Publishing</general><general>Springer Nature B.V</general><scope>AAYXX</scope><scope>CITATION</scope><scope>7QG</scope><scope>7QL</scope><scope>7QP</scope><scope>7QR</scope><scope>7SN</scope><scope>7SS</scope><scope>7T5</scope><scope>7T7</scope><scope>7TK</scope><scope>7TM</scope><scope>8FD</scope><scope>C1K</scope><scope>FR3</scope><scope>H94</scope><scope>K9.</scope><scope>M7N</scope><scope>P64</scope><scope>RC3</scope><orcidid>https://orcid.org/0000-0001-5243-0916</orcidid><orcidid>https://orcid.org/0000-0002-5216-5494</orcidid><orcidid>https://orcid.org/0000-0002-4677-1404</orcidid><orcidid>https://orcid.org/0000-0002-3594-2570</orcidid><orcidid>https://orcid.org/0000-0003-4228-2395</orcidid></search><sort><creationdate>2022</creationdate><title>Screening for drought tolerance and diversity analysis of Bangladeshi rice germplasms using morphophysiology and molecular markers</title><author>Mas-ud, Md. Atik ; Matin, Mohammad Nurul ; Fatamatuzzohora, Mst ; Ahamed, Md. Sabbir ; Chowdhury, Md. Rayhan ; Paul, Suman Kumar ; Karmakar, Sumon ; Kang, Sang Gu ; Hossain, Md. Shahadat</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c319t-500265331859fe57c0879cb67fc33ff12796ba314fa6ca714c2796adc70062623</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2022</creationdate><topic>Biomedical and Life Sciences</topic><topic>Breeding</topic><topic>Cell Biology</topic><topic>Cluster analysis</topic><topic>Crop growth</topic><topic>Crops</topic><topic>Drought</topic><topic>Drought resistance</topic><topic>Environmental stress</topic><topic>Food production</topic><topic>Genotypes</topic><topic>Growth chambers</topic><topic>Life Sciences</topic><topic>Markers</topic><topic>Microbiology</topic><topic>Original Article</topic><topic>Plant Sciences</topic><topic>Polyethylene glycol</topic><topic>Rice</topic><topic>Screening</topic><topic>Seedlings</topic><topic>Zoology</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Mas-ud, Md. Atik</creatorcontrib><creatorcontrib>Matin, Mohammad Nurul</creatorcontrib><creatorcontrib>Fatamatuzzohora, Mst</creatorcontrib><creatorcontrib>Ahamed, Md. Sabbir</creatorcontrib><creatorcontrib>Chowdhury, Md. Rayhan</creatorcontrib><creatorcontrib>Paul, Suman Kumar</creatorcontrib><creatorcontrib>Karmakar, Sumon</creatorcontrib><creatorcontrib>Kang, Sang Gu</creatorcontrib><creatorcontrib>Hossain, Md. Shahadat</creatorcontrib><collection>CrossRef</collection><collection>Animal Behavior Abstracts</collection><collection>Bacteriology Abstracts (Microbiology B)</collection><collection>Calcium &amp; Calcified Tissue Abstracts</collection><collection>Chemoreception Abstracts</collection><collection>Ecology Abstracts</collection><collection>Entomology Abstracts (Full archive)</collection><collection>Immunology Abstracts</collection><collection>Industrial and Applied Microbiology Abstracts (Microbiology A)</collection><collection>Neurosciences Abstracts</collection><collection>Nucleic Acids Abstracts</collection><collection>Technology Research Database</collection><collection>Environmental Sciences and Pollution Management</collection><collection>Engineering Research Database</collection><collection>AIDS and Cancer Research Abstracts</collection><collection>ProQuest Health &amp; Medical Complete (Alumni)</collection><collection>Algology Mycology and Protozoology Abstracts (Microbiology C)</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>Genetics Abstracts</collection><jtitle>Biológia</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Mas-ud, Md. Atik</au><au>Matin, Mohammad Nurul</au><au>Fatamatuzzohora, Mst</au><au>Ahamed, Md. Sabbir</au><au>Chowdhury, Md. Rayhan</au><au>Paul, Suman Kumar</au><au>Karmakar, Sumon</au><au>Kang, Sang Gu</au><au>Hossain, Md. Shahadat</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Screening for drought tolerance and diversity analysis of Bangladeshi rice germplasms using morphophysiology and molecular markers</atitle><jtitle>Biológia</jtitle><stitle>Biologia</stitle><date>2022</date><risdate>2022</risdate><volume>77</volume><issue>1</issue><spage>21</spage><epage>37</epage><pages>21-37</pages><issn>0006-3088</issn><eissn>1336-9563</eissn><abstract>Drought is one of the significant environmental stresses which remarkably reduces crop growth and productivity that ultimately impacts on yield of the crop and thereby reduces the national target of food production throughout the world every year. Therefore, crop genotypes with a tendency of drought tolerance and higher yield, immediately need to be identified to accelerate the breeding effort. In this study, a total of 110 rice genotypes were screened for drought tolerance using Polyethylene Glycol (PEG-6000) treatment at the seedling stage in the growth chamber and water withholding treatment at the vegetative stage in the field. Data were scored and analyzed with a standard evaluation system (SES) for drought tolerance. Among the 110 genotypes, 13 were identified as tolerant, and seven as moderately tolerant to drought stress. For drought control, BRRI Dhan-56 was used as check. The result of the drought tolerance degree (DTD) at the vegetative stage revealed the highest DTD value in Kalara (0.908). Further, screening with drought-linked SSR markers (RM105, RM219, RM328, and RM332) indicated that the RM322 marker identified 14 genotypes that have similar banding patterns with BRRI Dhan-56. The remaining three markers identified 20 genotypes that have similar banding patterns with check variety. The cluster analysis by UPGMA showed that the genotypes Gojja and Payjam (at control condition), as well as Ranashail and Mokbul (at stress condition) are more closely interconnected, but they are distantly related with Kolom, BRRI Dhan-56, and Varat payjam. These tolerant genotypes identified in this study could be used as parents in breeding programs to develop improved drought tolerant rice varieties.</abstract><cop>Cham</cop><pub>Springer International Publishing</pub><doi>10.1007/s11756-021-00923-6</doi><tpages>17</tpages><orcidid>https://orcid.org/0000-0001-5243-0916</orcidid><orcidid>https://orcid.org/0000-0002-5216-5494</orcidid><orcidid>https://orcid.org/0000-0002-4677-1404</orcidid><orcidid>https://orcid.org/0000-0002-3594-2570</orcidid><orcidid>https://orcid.org/0000-0003-4228-2395</orcidid></addata></record>
fulltext fulltext
identifier ISSN: 0006-3088
ispartof Biológia, 2022, Vol.77 (1), p.21-37
issn 0006-3088
1336-9563
language eng
recordid cdi_proquest_journals_2617315708
source SpringerLink Journals - AutoHoldings
subjects Biomedical and Life Sciences
Breeding
Cell Biology
Cluster analysis
Crop growth
Crops
Drought
Drought resistance
Environmental stress
Food production
Genotypes
Growth chambers
Life Sciences
Markers
Microbiology
Original Article
Plant Sciences
Polyethylene glycol
Rice
Screening
Seedlings
Zoology
title Screening for drought tolerance and diversity analysis of Bangladeshi rice germplasms using morphophysiology and molecular markers
url https://sfx.bib-bvb.de/sfx_tum?ctx_ver=Z39.88-2004&ctx_enc=info:ofi/enc:UTF-8&ctx_tim=2025-01-22T02%3A17%3A41IST&url_ver=Z39.88-2004&url_ctx_fmt=infofi/fmt:kev:mtx:ctx&rfr_id=info:sid/primo.exlibrisgroup.com:primo3-Article-proquest_cross&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rft.genre=article&rft.atitle=Screening%20for%20drought%20tolerance%20and%20diversity%20analysis%20of%20Bangladeshi%20rice%20germplasms%20using%20morphophysiology%20and%20molecular%20markers&rft.jtitle=Biolo%CC%81gia&rft.au=Mas-ud,%20Md.%20Atik&rft.date=2022&rft.volume=77&rft.issue=1&rft.spage=21&rft.epage=37&rft.pages=21-37&rft.issn=0006-3088&rft.eissn=1336-9563&rft_id=info:doi/10.1007/s11756-021-00923-6&rft_dat=%3Cproquest_cross%3E2617315708%3C/proquest_cross%3E%3Curl%3E%3C/url%3E&disable_directlink=true&sfx.directlink=off&sfx.report_link=0&rft_id=info:oai/&rft_pqid=2617315708&rft_id=info:pmid/&rfr_iscdi=true