Molecular performances of oil palm (Elaeis guineensis) tolerance to Ganoderma sp
Oil palm plantations in Asia, particularly in Indonesia and Malaysia face the threat of basal stem root diseases caused by Ganoderma sp. Various methods and approaches have been made to select the oil palm tolerant to Ganoderma, among others with genes selection. The purpose of this research is to a...
Gespeichert in:
| Veröffentlicht in: | Journal of physics. Conference series 2018-12, Vol.1116 (5), p.52001 |
|---|---|
| Hauptverfasser: | , , , , , , |
| Format: | Artikel |
| Sprache: | eng |
| Schlagworte: | |
| Online-Zugang: | Volltext |
| Tags: |
Tag hinzufügen
Keine Tags, Fügen Sie den ersten Tag hinzu!
|
| container_end_page | |
|---|---|
| container_issue | 5 |
| container_start_page | 52001 |
| container_title | Journal of physics. Conference series |
| container_volume | 1116 |
| creator | Afandi, D Basyuni, M Putri, L A P Chalil, D Wati, R Siregar, E B M Syahputra, I |
| description | Oil palm plantations in Asia, particularly in Indonesia and Malaysia face the threat of basal stem root diseases caused by Ganoderma sp. Various methods and approaches have been made to select the oil palm tolerant to Ganoderma, among others with genes selection. The purpose of this research is to analyze the molecular performance of some oil palm that tolerant to Ganoderma based specific SSR markers. The plant material used in this trial is two cross-series of genetic material belonging to PT Socfindo, which has been known the level of resistance to Ganoderma, first is cross-series of 15-year-old oil palm in the field, and secondly is a new cross-series for early detection in the nursery stage. The results showed all target genes are presented in all samples. There are differences in predicted gene expression between tolerant and susceptible palm in the healthy mature plant leave tissue. The five molecular markers (EgMT, EgIFR, Rgen_Pto, Eg002, and Eg003) in healthy palm leaf tissue can be considered as potential molecular markers for oil palm Ganoderma tolerant screening. |
| doi_str_mv | 10.1088/1742-6596/1116/5/052001 |
| format | Article |
| fullrecord | <record><control><sourceid>proquest_iop_j</sourceid><recordid>TN_cdi_proquest_journals_2565482100</recordid><sourceformat>XML</sourceformat><sourcesystem>PC</sourcesystem><sourcerecordid>2565482100</sourcerecordid><originalsourceid>FETCH-LOGICAL-c3651-1c0ad3e02961e529a44eec50d3040584800e14dd5ee11add402c4e24d34ba49a3</originalsourceid><addsrcrecordid>eNqFkFFLwzAQx4MoOKefwYAvKtRe0qRLH2XMqUwcqM8hNlfp6Jqa2Ae_vSmViSB4L3eQ3_-O_Ag5ZXDFQKmUzQRPclnkKWMsT2UKkgOwPTLZvezvZqUOyVEIG4As1mxC1g-uwbJvjKcd-sr5rWlLDNRV1NUN7UyzpeeLxmAd6Ftft4htqMMF_YgxP6BxokvTOosxSkN3TA4q0wQ8-e5T8nKzeJ7fJqvH5d38epWUWS5ZwkowNkPgRc5Q8sIIgVhKsBkIkEooAGTCWonImLFWAC8FcmEz8WpEYbIpORv3dt699xg-9Mb1vo0nNZe5FIqz-MkpmY1U6V0IHivd-Xpr_KdmoAd9ehCjB0l60KelHvXF5OWYrF33s_p-PX_6DerOVhHO_oD_O_EF7s1-QA</addsrcrecordid><sourcetype>Aggregation Database</sourcetype><iscdi>true</iscdi><recordtype>article</recordtype><pqid>2565482100</pqid></control><display><type>article</type><title>Molecular performances of oil palm (Elaeis guineensis) tolerance to Ganoderma sp</title><source>IOP Publishing Free Content</source><source>Elektronische Zeitschriftenbibliothek - Frei zugängliche E-Journals</source><source>IOPscience extra</source><source>Alma/SFX Local Collection</source><source>Free Full-Text Journals in Chemistry</source><creator>Afandi, D ; Basyuni, M ; Putri, L A P ; Chalil, D ; Wati, R ; Siregar, E B M ; Syahputra, I</creator><creatorcontrib>Afandi, D ; Basyuni, M ; Putri, L A P ; Chalil, D ; Wati, R ; Siregar, E B M ; Syahputra, I</creatorcontrib><description>Oil palm plantations in Asia, particularly in Indonesia and Malaysia face the threat of basal stem root diseases caused by Ganoderma sp. Various methods and approaches have been made to select the oil palm tolerant to Ganoderma, among others with genes selection. The purpose of this research is to analyze the molecular performance of some oil palm that tolerant to Ganoderma based specific SSR markers. The plant material used in this trial is two cross-series of genetic material belonging to PT Socfindo, which has been known the level of resistance to Ganoderma, first is cross-series of 15-year-old oil palm in the field, and secondly is a new cross-series for early detection in the nursery stage. The results showed all target genes are presented in all samples. There are differences in predicted gene expression between tolerant and susceptible palm in the healthy mature plant leave tissue. The five molecular markers (EgMT, EgIFR, Rgen_Pto, Eg002, and Eg003) in healthy palm leaf tissue can be considered as potential molecular markers for oil palm Ganoderma tolerant screening.</description><identifier>ISSN: 1742-6588</identifier><identifier>EISSN: 1742-6596</identifier><identifier>DOI: 10.1088/1742-6596/1116/5/052001</identifier><language>eng</language><publisher>Bristol: IOP Publishing</publisher><subject>Biomarkers ; Gene expression ; Genes</subject><ispartof>Journal of physics. Conference series, 2018-12, Vol.1116 (5), p.52001</ispartof><rights>Published under licence by IOP Publishing Ltd</rights><rights>2018. This work is published under http://creativecommons.org/licenses/by/3.0/ (the “License”). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License.</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c3651-1c0ad3e02961e529a44eec50d3040584800e14dd5ee11add402c4e24d34ba49a3</citedby><cites>FETCH-LOGICAL-c3651-1c0ad3e02961e529a44eec50d3040584800e14dd5ee11add402c4e24d34ba49a3</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://iopscience.iop.org/article/10.1088/1742-6596/1116/5/052001/pdf$$EPDF$$P50$$Giop$$Hfree_for_read</linktopdf><link.rule.ids>314,780,784,27923,27924,38867,38889,53839,53866</link.rule.ids></links><search><creatorcontrib>Afandi, D</creatorcontrib><creatorcontrib>Basyuni, M</creatorcontrib><creatorcontrib>Putri, L A P</creatorcontrib><creatorcontrib>Chalil, D</creatorcontrib><creatorcontrib>Wati, R</creatorcontrib><creatorcontrib>Siregar, E B M</creatorcontrib><creatorcontrib>Syahputra, I</creatorcontrib><title>Molecular performances of oil palm (Elaeis guineensis) tolerance to Ganoderma sp</title><title>Journal of physics. Conference series</title><addtitle>J. Phys.: Conf. Ser</addtitle><description>Oil palm plantations in Asia, particularly in Indonesia and Malaysia face the threat of basal stem root diseases caused by Ganoderma sp. Various methods and approaches have been made to select the oil palm tolerant to Ganoderma, among others with genes selection. The purpose of this research is to analyze the molecular performance of some oil palm that tolerant to Ganoderma based specific SSR markers. The plant material used in this trial is two cross-series of genetic material belonging to PT Socfindo, which has been known the level of resistance to Ganoderma, first is cross-series of 15-year-old oil palm in the field, and secondly is a new cross-series for early detection in the nursery stage. The results showed all target genes are presented in all samples. There are differences in predicted gene expression between tolerant and susceptible palm in the healthy mature plant leave tissue. The five molecular markers (EgMT, EgIFR, Rgen_Pto, Eg002, and Eg003) in healthy palm leaf tissue can be considered as potential molecular markers for oil palm Ganoderma tolerant screening.</description><subject>Biomarkers</subject><subject>Gene expression</subject><subject>Genes</subject><issn>1742-6588</issn><issn>1742-6596</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2018</creationdate><recordtype>article</recordtype><sourceid>O3W</sourceid><sourceid>ABUWG</sourceid><sourceid>AFKRA</sourceid><sourceid>AZQEC</sourceid><sourceid>BENPR</sourceid><sourceid>CCPQU</sourceid><sourceid>DWQXO</sourceid><recordid>eNqFkFFLwzAQx4MoOKefwYAvKtRe0qRLH2XMqUwcqM8hNlfp6Jqa2Ae_vSmViSB4L3eQ3_-O_Ag5ZXDFQKmUzQRPclnkKWMsT2UKkgOwPTLZvezvZqUOyVEIG4As1mxC1g-uwbJvjKcd-sr5rWlLDNRV1NUN7UyzpeeLxmAd6Ftft4htqMMF_YgxP6BxokvTOosxSkN3TA4q0wQ8-e5T8nKzeJ7fJqvH5d38epWUWS5ZwkowNkPgRc5Q8sIIgVhKsBkIkEooAGTCWonImLFWAC8FcmEz8WpEYbIpORv3dt699xg-9Mb1vo0nNZe5FIqz-MkpmY1U6V0IHivd-Xpr_KdmoAd9ehCjB0l60KelHvXF5OWYrF33s_p-PX_6DerOVhHO_oD_O_EF7s1-QA</recordid><startdate>20181201</startdate><enddate>20181201</enddate><creator>Afandi, D</creator><creator>Basyuni, M</creator><creator>Putri, L A P</creator><creator>Chalil, D</creator><creator>Wati, R</creator><creator>Siregar, E B M</creator><creator>Syahputra, I</creator><general>IOP Publishing</general><scope>O3W</scope><scope>TSCCA</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>8FD</scope><scope>8FE</scope><scope>8FG</scope><scope>ABUWG</scope><scope>AFKRA</scope><scope>ARAPS</scope><scope>AZQEC</scope><scope>BENPR</scope><scope>BGLVJ</scope><scope>CCPQU</scope><scope>DWQXO</scope><scope>H8D</scope><scope>HCIFZ</scope><scope>L7M</scope><scope>P5Z</scope><scope>P62</scope><scope>PIMPY</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>PRINS</scope></search><sort><creationdate>20181201</creationdate><title>Molecular performances of oil palm (Elaeis guineensis) tolerance to Ganoderma sp</title><author>Afandi, D ; Basyuni, M ; Putri, L A P ; Chalil, D ; Wati, R ; Siregar, E B M ; Syahputra, I</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c3651-1c0ad3e02961e529a44eec50d3040584800e14dd5ee11add402c4e24d34ba49a3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2018</creationdate><topic>Biomarkers</topic><topic>Gene expression</topic><topic>Genes</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Afandi, D</creatorcontrib><creatorcontrib>Basyuni, M</creatorcontrib><creatorcontrib>Putri, L A P</creatorcontrib><creatorcontrib>Chalil, D</creatorcontrib><creatorcontrib>Wati, R</creatorcontrib><creatorcontrib>Siregar, E B M</creatorcontrib><creatorcontrib>Syahputra, I</creatorcontrib><collection>IOP Publishing Free Content</collection><collection>IOPscience (Open Access)</collection><collection>CrossRef</collection><collection>Technology Research Database</collection><collection>ProQuest SciTech Collection</collection><collection>ProQuest Technology Collection</collection><collection>ProQuest Central (Alumni Edition)</collection><collection>ProQuest Central UK/Ireland</collection><collection>Advanced Technologies & Aerospace Collection</collection><collection>ProQuest Central Essentials</collection><collection>ProQuest Central</collection><collection>Technology Collection</collection><collection>ProQuest One Community College</collection><collection>ProQuest Central Korea</collection><collection>Aerospace Database</collection><collection>SciTech Premium Collection</collection><collection>Advanced Technologies Database with Aerospace</collection><collection>Advanced Technologies & Aerospace Database</collection><collection>ProQuest Advanced Technologies & Aerospace Collection</collection><collection>Publicly Available Content Database</collection><collection>ProQuest One Academic Eastern Edition (DO NOT USE)</collection><collection>ProQuest One Academic</collection><collection>ProQuest One Academic UKI Edition</collection><collection>ProQuest Central China</collection><jtitle>Journal of physics. Conference series</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Afandi, D</au><au>Basyuni, M</au><au>Putri, L A P</au><au>Chalil, D</au><au>Wati, R</au><au>Siregar, E B M</au><au>Syahputra, I</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Molecular performances of oil palm (Elaeis guineensis) tolerance to Ganoderma sp</atitle><jtitle>Journal of physics. Conference series</jtitle><addtitle>J. Phys.: Conf. Ser</addtitle><date>2018-12-01</date><risdate>2018</risdate><volume>1116</volume><issue>5</issue><spage>52001</spage><pages>52001-</pages><issn>1742-6588</issn><eissn>1742-6596</eissn><abstract>Oil palm plantations in Asia, particularly in Indonesia and Malaysia face the threat of basal stem root diseases caused by Ganoderma sp. Various methods and approaches have been made to select the oil palm tolerant to Ganoderma, among others with genes selection. The purpose of this research is to analyze the molecular performance of some oil palm that tolerant to Ganoderma based specific SSR markers. The plant material used in this trial is two cross-series of genetic material belonging to PT Socfindo, which has been known the level of resistance to Ganoderma, first is cross-series of 15-year-old oil palm in the field, and secondly is a new cross-series for early detection in the nursery stage. The results showed all target genes are presented in all samples. There are differences in predicted gene expression between tolerant and susceptible palm in the healthy mature plant leave tissue. The five molecular markers (EgMT, EgIFR, Rgen_Pto, Eg002, and Eg003) in healthy palm leaf tissue can be considered as potential molecular markers for oil palm Ganoderma tolerant screening.</abstract><cop>Bristol</cop><pub>IOP Publishing</pub><doi>10.1088/1742-6596/1116/5/052001</doi><tpages>6</tpages><oa>free_for_read</oa></addata></record> |
| fulltext | fulltext |
| identifier | ISSN: 1742-6588 |
| ispartof | Journal of physics. Conference series, 2018-12, Vol.1116 (5), p.52001 |
| issn | 1742-6588 1742-6596 |
| language | eng |
| recordid | cdi_proquest_journals_2565482100 |
| source | IOP Publishing Free Content; Elektronische Zeitschriftenbibliothek - Frei zugängliche E-Journals; IOPscience extra; Alma/SFX Local Collection; Free Full-Text Journals in Chemistry |
| subjects | Biomarkers Gene expression Genes |
| title | Molecular performances of oil palm (Elaeis guineensis) tolerance to Ganoderma sp |
| url | https://sfx.bib-bvb.de/sfx_tum?ctx_ver=Z39.88-2004&ctx_enc=info:ofi/enc:UTF-8&ctx_tim=2025-01-08T07%3A34%3A16IST&url_ver=Z39.88-2004&url_ctx_fmt=infofi/fmt:kev:mtx:ctx&rfr_id=info:sid/primo.exlibrisgroup.com:primo3-Article-proquest_iop_j&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rft.genre=article&rft.atitle=Molecular%20performances%20of%20oil%20palm%20(Elaeis%20guineensis)%20tolerance%20to%20Ganoderma%20sp&rft.jtitle=Journal%20of%20physics.%20Conference%20series&rft.au=Afandi,%20D&rft.date=2018-12-01&rft.volume=1116&rft.issue=5&rft.spage=52001&rft.pages=52001-&rft.issn=1742-6588&rft.eissn=1742-6596&rft_id=info:doi/10.1088/1742-6596/1116/5/052001&rft_dat=%3Cproquest_iop_j%3E2565482100%3C/proquest_iop_j%3E%3Curl%3E%3C/url%3E&disable_directlink=true&sfx.directlink=off&sfx.report_link=0&rft_id=info:oai/&rft_pqid=2565482100&rft_id=info:pmid/&rfr_iscdi=true |