Searching for intraspecific chromosomic variation in Passiflora L. species
Comparative cytogenetic studies are very useful in the characterization of different accessions of the same plant. The aimed of this study was search for intraspecific karyotypic variability in three species of the Passiflora genus using chromosomal conventional techniques (Giemsa staining and Fluor...
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description | Comparative cytogenetic studies are very useful in the characterization of different accessions of the same plant. The aimed of this study was search for intraspecific karyotypic variability in three species of the
Passiflora
genus using chromosomal conventional techniques (Giemsa staining and Fluorochromes base-specific) and molecular cytogenetic technique as Fluorescent in Situ Hybridization (FISH). The diploid character was observed in all plants analyzed by conventional staining being 2
n
= 18 as chromosomes number. The base-specific heterochromatin only showed GC-rich blocks on satellites and nucleolar organizer regions, but no intraspecific variation was found on CMA
3
+
/DAPI
−
blocks, except for the two
P. tholozanii
accession, where the accession from Manaus showed five chromosomes with CMA
3
+
/DAPI
−
separate blocks from where the blocks of the other accession were found. The CMA
3
+
/DAPI
−
blocks showed relation to 45S rDNA located by FISH with variation only between
P. tholozani
accession. The other accessions from
P. nitida
and
P. coccinea
showed no quantitative differentiation on CMA
3
+
/DAPI
−
blocks and 45S rDNA sites. Telomeric sites for all species were
Arabidopsis
-type and were limited to terminal sites suggesting chromosomal stability. The low intraspecific variation reinforces the need of developing other new chromosomal marker for cytogenetic mapping and increase the resolution on the chromatin visualization. |
doi_str_mv | 10.1007/s11756-021-00773-2 |
format | Article |
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Passiflora
genus using chromosomal conventional techniques (Giemsa staining and Fluorochromes base-specific) and molecular cytogenetic technique as Fluorescent in Situ Hybridization (FISH). The diploid character was observed in all plants analyzed by conventional staining being 2
n
= 18 as chromosomes number. The base-specific heterochromatin only showed GC-rich blocks on satellites and nucleolar organizer regions, but no intraspecific variation was found on CMA
3
+
/DAPI
−
blocks, except for the two
P. tholozanii
accession, where the accession from Manaus showed five chromosomes with CMA
3
+
/DAPI
−
separate blocks from where the blocks of the other accession were found. The CMA
3
+
/DAPI
−
blocks showed relation to 45S rDNA located by FISH with variation only between
P. tholozani
accession. The other accessions from
P. nitida
and
P. coccinea
showed no quantitative differentiation on CMA
3
+
/DAPI
−
blocks and 45S rDNA sites. Telomeric sites for all species were
Arabidopsis
-type and were limited to terminal sites suggesting chromosomal stability. The low intraspecific variation reinforces the need of developing other new chromosomal marker for cytogenetic mapping and increase the resolution on the chromatin visualization.</description><identifier>ISSN: 0006-3088</identifier><identifier>EISSN: 1336-9563</identifier><identifier>DOI: 10.1007/s11756-021-00773-2</identifier><language>eng</language><publisher>Cham: Springer International Publishing</publisher><subject>Biomedical and Life Sciences ; Cell Biology ; Chromatin ; Chromosomes ; Cytogenetics ; Diploids ; Fluorescence ; Fluorescence in situ hybridization ; Fluorophores ; Gene mapping ; Heterochromatin ; Life Sciences ; Microbiology ; Nucleoli ; Original Article ; Passiflora ; Plant Sciences ; Species ; Staining ; Variation ; Zoology</subject><ispartof>Biológia, 2021-09, Vol.76 (9), p.2467-2476</ispartof><rights>Plant Science and Biodiversity Centre, Slovak Academy of Sciences 2021</rights><rights>Plant Science and Biodiversity Centre, Slovak Academy of Sciences 2021.</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><cites>FETCH-LOGICAL-c270t-ad0502367224e11b26c0691eb7a21b2a3f9c46408ede7e96bb64c18e0296e45f3</cites><orcidid>0000-0001-9007-1731 ; 0000-0003-3414-6537 ; 0000-0003-0292-7988</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://link.springer.com/content/pdf/10.1007/s11756-021-00773-2$$EPDF$$P50$$Gspringer$$H</linktopdf><linktohtml>$$Uhttps://link.springer.com/10.1007/s11756-021-00773-2$$EHTML$$P50$$Gspringer$$H</linktohtml><link.rule.ids>314,776,780,27903,27904,41467,42536,51297</link.rule.ids></links><search><creatorcontrib>de Oliveira, Ohana Luiza Santos</creatorcontrib><creatorcontrib>de Melo, Cláusio Antônio Ferreira</creatorcontrib><creatorcontrib>Souza, Margarete Magalhães</creatorcontrib><title>Searching for intraspecific chromosomic variation in Passiflora L. species</title><title>Biológia</title><addtitle>Biologia</addtitle><description>Comparative cytogenetic studies are very useful in the characterization of different accessions of the same plant. The aimed of this study was search for intraspecific karyotypic variability in three species of the
Passiflora
genus using chromosomal conventional techniques (Giemsa staining and Fluorochromes base-specific) and molecular cytogenetic technique as Fluorescent in Situ Hybridization (FISH). The diploid character was observed in all plants analyzed by conventional staining being 2
n
= 18 as chromosomes number. The base-specific heterochromatin only showed GC-rich blocks on satellites and nucleolar organizer regions, but no intraspecific variation was found on CMA
3
+
/DAPI
−
blocks, except for the two
P. tholozanii
accession, where the accession from Manaus showed five chromosomes with CMA
3
+
/DAPI
−
separate blocks from where the blocks of the other accession were found. The CMA
3
+
/DAPI
−
blocks showed relation to 45S rDNA located by FISH with variation only between
P. tholozani
accession. The other accessions from
P. nitida
and
P. coccinea
showed no quantitative differentiation on CMA
3
+
/DAPI
−
blocks and 45S rDNA sites. Telomeric sites for all species were
Arabidopsis
-type and were limited to terminal sites suggesting chromosomal stability. The low intraspecific variation reinforces the need of developing other new chromosomal marker for cytogenetic mapping and increase the resolution on the chromatin visualization.</description><subject>Biomedical and Life Sciences</subject><subject>Cell Biology</subject><subject>Chromatin</subject><subject>Chromosomes</subject><subject>Cytogenetics</subject><subject>Diploids</subject><subject>Fluorescence</subject><subject>Fluorescence in situ hybridization</subject><subject>Fluorophores</subject><subject>Gene mapping</subject><subject>Heterochromatin</subject><subject>Life Sciences</subject><subject>Microbiology</subject><subject>Nucleoli</subject><subject>Original Article</subject><subject>Passiflora</subject><subject>Plant Sciences</subject><subject>Species</subject><subject>Staining</subject><subject>Variation</subject><subject>Zoology</subject><issn>0006-3088</issn><issn>1336-9563</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2021</creationdate><recordtype>article</recordtype><recordid>eNp9kE1LAzEQhoMoWKt_wNOC59TJ9-YoxU8KCuo5ZNNsm9Ld1GQr-O-NXcGbp5mB530HHoQuCcwIgLrOhCghMVCCy6kYpkdoQhiTWAvJjtEEACRmUNen6CznDQBXAsgEPb16m9w69KuqjakK_ZBs3nkX2uAqt06xizl2Zf-0KdghxL4w1YvNObTbmGy1mFUH3udzdNLabfYXv3OK3u9u3-YPePF8_zi_WWBHFQzYLkEAZVJRyj0hDZUOpCa-UZaWy7JWOy451H7pldeyaSR3pPZAtfRctGyKrsbeXYofe58Hs4n71JeXhgpJNAfQolB0pFyKOSffml0KnU1fhoD5cWZGZ6Y4MwdnhpYQG0O5wP3Kp7_qf1Lf0v5uaQ</recordid><startdate>20210901</startdate><enddate>20210901</enddate><creator>de Oliveira, Ohana Luiza Santos</creator><creator>de Melo, Cláusio Antônio Ferreira</creator><creator>Souza, Margarete Magalhães</creator><general>Springer International Publishing</general><general>Springer Nature B.V</general><scope>AAYXX</scope><scope>CITATION</scope><scope>7QG</scope><scope>7QL</scope><scope>7QP</scope><scope>7QR</scope><scope>7SN</scope><scope>7SS</scope><scope>7T5</scope><scope>7T7</scope><scope>7TK</scope><scope>7TM</scope><scope>8FD</scope><scope>C1K</scope><scope>FR3</scope><scope>H94</scope><scope>K9.</scope><scope>M7N</scope><scope>P64</scope><scope>RC3</scope><orcidid>https://orcid.org/0000-0001-9007-1731</orcidid><orcidid>https://orcid.org/0000-0003-3414-6537</orcidid><orcidid>https://orcid.org/0000-0003-0292-7988</orcidid></search><sort><creationdate>20210901</creationdate><title>Searching for intraspecific chromosomic variation in Passiflora L. species</title><author>de Oliveira, Ohana Luiza Santos ; de Melo, Cláusio Antônio Ferreira ; Souza, Margarete Magalhães</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c270t-ad0502367224e11b26c0691eb7a21b2a3f9c46408ede7e96bb64c18e0296e45f3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2021</creationdate><topic>Biomedical and Life Sciences</topic><topic>Cell Biology</topic><topic>Chromatin</topic><topic>Chromosomes</topic><topic>Cytogenetics</topic><topic>Diploids</topic><topic>Fluorescence</topic><topic>Fluorescence in situ hybridization</topic><topic>Fluorophores</topic><topic>Gene mapping</topic><topic>Heterochromatin</topic><topic>Life Sciences</topic><topic>Microbiology</topic><topic>Nucleoli</topic><topic>Original Article</topic><topic>Passiflora</topic><topic>Plant Sciences</topic><topic>Species</topic><topic>Staining</topic><topic>Variation</topic><topic>Zoology</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>de Oliveira, Ohana Luiza Santos</creatorcontrib><creatorcontrib>de Melo, Cláusio Antônio Ferreira</creatorcontrib><creatorcontrib>Souza, Margarete Magalhães</creatorcontrib><collection>CrossRef</collection><collection>Animal Behavior Abstracts</collection><collection>Bacteriology Abstracts (Microbiology B)</collection><collection>Calcium & Calcified Tissue Abstracts</collection><collection>Chemoreception Abstracts</collection><collection>Ecology Abstracts</collection><collection>Entomology Abstracts (Full archive)</collection><collection>Immunology Abstracts</collection><collection>Industrial and Applied Microbiology Abstracts (Microbiology A)</collection><collection>Neurosciences Abstracts</collection><collection>Nucleic Acids Abstracts</collection><collection>Technology Research Database</collection><collection>Environmental Sciences and Pollution Management</collection><collection>Engineering Research Database</collection><collection>AIDS and Cancer Research Abstracts</collection><collection>ProQuest Health & Medical Complete (Alumni)</collection><collection>Algology Mycology and Protozoology Abstracts (Microbiology C)</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>Genetics Abstracts</collection><jtitle>Biológia</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>de Oliveira, Ohana Luiza Santos</au><au>de Melo, Cláusio Antônio Ferreira</au><au>Souza, Margarete Magalhães</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Searching for intraspecific chromosomic variation in Passiflora L. species</atitle><jtitle>Biológia</jtitle><stitle>Biologia</stitle><date>2021-09-01</date><risdate>2021</risdate><volume>76</volume><issue>9</issue><spage>2467</spage><epage>2476</epage><pages>2467-2476</pages><issn>0006-3088</issn><eissn>1336-9563</eissn><abstract>Comparative cytogenetic studies are very useful in the characterization of different accessions of the same plant. The aimed of this study was search for intraspecific karyotypic variability in three species of the
Passiflora
genus using chromosomal conventional techniques (Giemsa staining and Fluorochromes base-specific) and molecular cytogenetic technique as Fluorescent in Situ Hybridization (FISH). The diploid character was observed in all plants analyzed by conventional staining being 2
n
= 18 as chromosomes number. The base-specific heterochromatin only showed GC-rich blocks on satellites and nucleolar organizer regions, but no intraspecific variation was found on CMA
3
+
/DAPI
−
blocks, except for the two
P. tholozanii
accession, where the accession from Manaus showed five chromosomes with CMA
3
+
/DAPI
−
separate blocks from where the blocks of the other accession were found. The CMA
3
+
/DAPI
−
blocks showed relation to 45S rDNA located by FISH with variation only between
P. tholozani
accession. The other accessions from
P. nitida
and
P. coccinea
showed no quantitative differentiation on CMA
3
+
/DAPI
−
blocks and 45S rDNA sites. Telomeric sites for all species were
Arabidopsis
-type and were limited to terminal sites suggesting chromosomal stability. The low intraspecific variation reinforces the need of developing other new chromosomal marker for cytogenetic mapping and increase the resolution on the chromatin visualization.</abstract><cop>Cham</cop><pub>Springer International Publishing</pub><doi>10.1007/s11756-021-00773-2</doi><tpages>10</tpages><orcidid>https://orcid.org/0000-0001-9007-1731</orcidid><orcidid>https://orcid.org/0000-0003-3414-6537</orcidid><orcidid>https://orcid.org/0000-0003-0292-7988</orcidid></addata></record> |
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subjects | Biomedical and Life Sciences Cell Biology Chromatin Chromosomes Cytogenetics Diploids Fluorescence Fluorescence in situ hybridization Fluorophores Gene mapping Heterochromatin Life Sciences Microbiology Nucleoli Original Article Passiflora Plant Sciences Species Staining Variation Zoology |
title | Searching for intraspecific chromosomic variation in Passiflora L. species |
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