Salinimonas marina sp. nov. Isolated from Jeju Island Marine Sediment
A Gram-stain-negative, rod-shaped, and strictly aerobic bacterium designated strain G2-b T was isolated from the marine sediment around Jeju Island, South Korea. Strain G2-b T was found to be catalase- and oxidase-positive, white-pigmented, motile with polar flagellum, and to grow optimally at 25 °C...
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| creator | Kim, Minji Lee, Ki-Eun Cha, In-Tae Kim, Eui Tae Park, Soo-Je |
| description | A Gram-stain-negative, rod-shaped, and strictly aerobic bacterium designated strain G2-b
T
was isolated from the marine sediment around Jeju Island, South Korea. Strain G2-b
T
was found to be catalase- and oxidase-positive, white-pigmented, motile with polar flagellum, and to grow optimally at 25 °C, pH 7.0 in the presence of 4% (w/v) NaCl. Phylogenetic analysis based on the 16S rRNA gene sequence revealed that strain G2-b
T
belongs to the genus
Salinimonas
and was closely related
Salinimonas sediminis
N102
T
(96.7% sequence similarity),
Salinimonas iocasae
KX18D6
T
(95.4%),
Salinimonas lutimaris
DPSR-4
T
(94.7%), and
Salinimonas chungwhensis
BH030046
T
(94.6%). Strain G2-b
T
possessed ubiquinone 8 as the sole respiratory quinone, summed feature 3 and summed feature 8 as the major fatty acids, and phosphatidylethanolamine and phosphatidylglycerol as the major polar lipids. The genome size and G + C content of the strain G2-b
T
were determined to be 3,765,169 bp, and 49.7%, respectively, as a complete circular genome. Based on the genomic analyses (e.g., average nucleotide identity and digital DNA–DNA hybridization), the strain G2-B
T
likely represents a new species in the genus
Salinimonas
, for which we propose to name this novel bacterium
Salinimonas marina
sp. nov., and the type strain is designated G2-B
T
(= KCTC 72817
T
= VTCC 910110
T
). |
| doi_str_mv | 10.1007/s00284-021-02576-9 |
| format | Article |
| fullrecord | <record><control><sourceid>proquest_cross</sourceid><recordid>TN_cdi_proquest_journals_2553125094</recordid><sourceformat>XML</sourceformat><sourcesystem>PC</sourcesystem><sourcerecordid>2553125094</sourcerecordid><originalsourceid>FETCH-LOGICAL-c303t-f14bd58edf1815eb5f1c4db3427a1f4c7563e76948f4b51bf2fb407f42d401623</originalsourceid><addsrcrecordid>eNp9kE1LxDAQhoMouK7-AU8BL166zuSjH0dZVl1Z8bB6DmmbSJe2WZNW8N-btYLgwcMwMPO8w_AQcomwQIDsJgCwXCTAMJbM0qQ4IjMUnCVQFHhMZsAFT_JU4ik5C2EHgKwAnJHVVrdN33Su14F22je9pmG_oL37WNB1cK0eTE2tdx19NLsxjlrd1_TpQBq6NXXTmX44JydWt8Fc_PQ5eb1bvSwfks3z_Xp5u0kqDnxILIqylrmpLeYoTSktVqIuuWCZRiuqTKbcZGkhcitKiaVlthSQWcFqAZgyPifX0929d--jCYPqmlCZNv5k3BgUk0KmwJiUEb36g-7c6Pv4nTqskUkoRKTYRFXeheCNVXvfRA2fCkEdzKrJrIpm1bdZVcQQn0Ihwv2b8b-n_0l9ATwoeZM</addsrcrecordid><sourcetype>Aggregation Database</sourcetype><iscdi>true</iscdi><recordtype>article</recordtype><pqid>2553125094</pqid></control><display><type>article</type><title>Salinimonas marina sp. nov. Isolated from Jeju Island Marine Sediment</title><source>SpringerNature Journals</source><creator>Kim, Minji ; Lee, Ki-Eun ; Cha, In-Tae ; Kim, Eui Tae ; Park, Soo-Je</creator><creatorcontrib>Kim, Minji ; Lee, Ki-Eun ; Cha, In-Tae ; Kim, Eui Tae ; Park, Soo-Je</creatorcontrib><description>A Gram-stain-negative, rod-shaped, and strictly aerobic bacterium designated strain G2-b
T
was isolated from the marine sediment around Jeju Island, South Korea. Strain G2-b
T
was found to be catalase- and oxidase-positive, white-pigmented, motile with polar flagellum, and to grow optimally at 25 °C, pH 7.0 in the presence of 4% (w/v) NaCl. Phylogenetic analysis based on the 16S rRNA gene sequence revealed that strain G2-b
T
belongs to the genus
Salinimonas
and was closely related
Salinimonas sediminis
N102
T
(96.7% sequence similarity),
Salinimonas iocasae
KX18D6
T
(95.4%),
Salinimonas lutimaris
DPSR-4
T
(94.7%), and
Salinimonas chungwhensis
BH030046
T
(94.6%). Strain G2-b
T
possessed ubiquinone 8 as the sole respiratory quinone, summed feature 3 and summed feature 8 as the major fatty acids, and phosphatidylethanolamine and phosphatidylglycerol as the major polar lipids. The genome size and G + C content of the strain G2-b
T
were determined to be 3,765,169 bp, and 49.7%, respectively, as a complete circular genome. Based on the genomic analyses (e.g., average nucleotide identity and digital DNA–DNA hybridization), the strain G2-B
T
likely represents a new species in the genus
Salinimonas
, for which we propose to name this novel bacterium
Salinimonas marina
sp. nov., and the type strain is designated G2-B
T
(= KCTC 72817
T
= VTCC 910110
T
).</description><identifier>ISSN: 0343-8651</identifier><identifier>EISSN: 1432-0991</identifier><identifier>DOI: 10.1007/s00284-021-02576-9</identifier><language>eng</language><publisher>New York: Springer US</publisher><subject>Bacteria ; Biomedical and Life Sciences ; Biotechnology ; Catalase ; Deoxyribonucleic acid ; DNA ; Fatty acids ; Flagella ; Genomes ; Genomic analysis ; Gram stain ; Hybridization ; Life Sciences ; Lipids ; Marine sediments ; Microbiology ; New species ; Nucleotides ; Phosphatidylethanolamine ; Phosphatidylglycerol ; Phylogeny ; Quinones ; rRNA 16S ; Sodium chloride ; Ubiquinone</subject><ispartof>Current microbiology, 2021-08, Vol.78 (8), p.3321-3327</ispartof><rights>The Author(s), under exclusive licence to Springer Science+Business Media, LLC, part of Springer Nature 2021</rights><rights>The Author(s), under exclusive licence to Springer Science+Business Media, LLC, part of Springer Nature 2021.</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><cites>FETCH-LOGICAL-c303t-f14bd58edf1815eb5f1c4db3427a1f4c7563e76948f4b51bf2fb407f42d401623</cites><orcidid>0000-0003-0359-7431</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://link.springer.com/content/pdf/10.1007/s00284-021-02576-9$$EPDF$$P50$$Gspringer$$H</linktopdf><linktohtml>$$Uhttps://link.springer.com/10.1007/s00284-021-02576-9$$EHTML$$P50$$Gspringer$$H</linktohtml><link.rule.ids>315,781,785,27926,27927,41490,42559,51321</link.rule.ids></links><search><creatorcontrib>Kim, Minji</creatorcontrib><creatorcontrib>Lee, Ki-Eun</creatorcontrib><creatorcontrib>Cha, In-Tae</creatorcontrib><creatorcontrib>Kim, Eui Tae</creatorcontrib><creatorcontrib>Park, Soo-Je</creatorcontrib><title>Salinimonas marina sp. nov. Isolated from Jeju Island Marine Sediment</title><title>Current microbiology</title><addtitle>Curr Microbiol</addtitle><description>A Gram-stain-negative, rod-shaped, and strictly aerobic bacterium designated strain G2-b
T
was isolated from the marine sediment around Jeju Island, South Korea. Strain G2-b
T
was found to be catalase- and oxidase-positive, white-pigmented, motile with polar flagellum, and to grow optimally at 25 °C, pH 7.0 in the presence of 4% (w/v) NaCl. Phylogenetic analysis based on the 16S rRNA gene sequence revealed that strain G2-b
T
belongs to the genus
Salinimonas
and was closely related
Salinimonas sediminis
N102
T
(96.7% sequence similarity),
Salinimonas iocasae
KX18D6
T
(95.4%),
Salinimonas lutimaris
DPSR-4
T
(94.7%), and
Salinimonas chungwhensis
BH030046
T
(94.6%). Strain G2-b
T
possessed ubiquinone 8 as the sole respiratory quinone, summed feature 3 and summed feature 8 as the major fatty acids, and phosphatidylethanolamine and phosphatidylglycerol as the major polar lipids. The genome size and G + C content of the strain G2-b
T
were determined to be 3,765,169 bp, and 49.7%, respectively, as a complete circular genome. Based on the genomic analyses (e.g., average nucleotide identity and digital DNA–DNA hybridization), the strain G2-B
T
likely represents a new species in the genus
Salinimonas
, for which we propose to name this novel bacterium
Salinimonas marina
sp. nov., and the type strain is designated G2-B
T
(= KCTC 72817
T
= VTCC 910110
T
).</description><subject>Bacteria</subject><subject>Biomedical and Life Sciences</subject><subject>Biotechnology</subject><subject>Catalase</subject><subject>Deoxyribonucleic acid</subject><subject>DNA</subject><subject>Fatty acids</subject><subject>Flagella</subject><subject>Genomes</subject><subject>Genomic analysis</subject><subject>Gram stain</subject><subject>Hybridization</subject><subject>Life Sciences</subject><subject>Lipids</subject><subject>Marine sediments</subject><subject>Microbiology</subject><subject>New species</subject><subject>Nucleotides</subject><subject>Phosphatidylethanolamine</subject><subject>Phosphatidylglycerol</subject><subject>Phylogeny</subject><subject>Quinones</subject><subject>rRNA 16S</subject><subject>Sodium chloride</subject><subject>Ubiquinone</subject><issn>0343-8651</issn><issn>1432-0991</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2021</creationdate><recordtype>article</recordtype><sourceid>8G5</sourceid><sourceid>ABUWG</sourceid><sourceid>AFKRA</sourceid><sourceid>AZQEC</sourceid><sourceid>BENPR</sourceid><sourceid>CCPQU</sourceid><sourceid>DWQXO</sourceid><sourceid>GNUQQ</sourceid><sourceid>GUQSH</sourceid><sourceid>M2O</sourceid><recordid>eNp9kE1LxDAQhoMouK7-AU8BL166zuSjH0dZVl1Z8bB6DmmbSJe2WZNW8N-btYLgwcMwMPO8w_AQcomwQIDsJgCwXCTAMJbM0qQ4IjMUnCVQFHhMZsAFT_JU4ik5C2EHgKwAnJHVVrdN33Su14F22je9pmG_oL37WNB1cK0eTE2tdx19NLsxjlrd1_TpQBq6NXXTmX44JydWt8Fc_PQ5eb1bvSwfks3z_Xp5u0kqDnxILIqylrmpLeYoTSktVqIuuWCZRiuqTKbcZGkhcitKiaVlthSQWcFqAZgyPifX0929d--jCYPqmlCZNv5k3BgUk0KmwJiUEb36g-7c6Pv4nTqskUkoRKTYRFXeheCNVXvfRA2fCkEdzKrJrIpm1bdZVcQQn0Ihwv2b8b-n_0l9ATwoeZM</recordid><startdate>20210801</startdate><enddate>20210801</enddate><creator>Kim, Minji</creator><creator>Lee, Ki-Eun</creator><creator>Cha, In-Tae</creator><creator>Kim, Eui Tae</creator><creator>Park, Soo-Je</creator><general>Springer US</general><general>Springer Nature B.V</general><scope>AAYXX</scope><scope>CITATION</scope><scope>3V.</scope><scope>7QL</scope><scope>7T7</scope><scope>7TK</scope><scope>7TM</scope><scope>7U9</scope><scope>7X7</scope><scope>7XB</scope><scope>88A</scope><scope>88E</scope><scope>8AO</scope><scope>8FD</scope><scope>8FE</scope><scope>8FH</scope><scope>8FI</scope><scope>8FJ</scope><scope>8FK</scope><scope>8G5</scope><scope>ABUWG</scope><scope>AFKRA</scope><scope>AZQEC</scope><scope>BBNVY</scope><scope>BENPR</scope><scope>BHPHI</scope><scope>C1K</scope><scope>CCPQU</scope><scope>DWQXO</scope><scope>FR3</scope><scope>FYUFA</scope><scope>GHDGH</scope><scope>GNUQQ</scope><scope>GUQSH</scope><scope>H94</scope><scope>HCIFZ</scope><scope>K9.</scope><scope>LK8</scope><scope>M0S</scope><scope>M1P</scope><scope>M2O</scope><scope>M7N</scope><scope>M7P</scope><scope>MBDVC</scope><scope>P64</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>Q9U</scope><scope>RC3</scope><scope>7X8</scope><orcidid>https://orcid.org/0000-0003-0359-7431</orcidid></search><sort><creationdate>20210801</creationdate><title>Salinimonas marina sp. nov. Isolated from Jeju Island Marine Sediment</title><author>Kim, Minji ; Lee, Ki-Eun ; Cha, In-Tae ; Kim, Eui Tae ; Park, Soo-Je</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c303t-f14bd58edf1815eb5f1c4db3427a1f4c7563e76948f4b51bf2fb407f42d401623</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2021</creationdate><topic>Bacteria</topic><topic>Biomedical and Life Sciences</topic><topic>Biotechnology</topic><topic>Catalase</topic><topic>Deoxyribonucleic acid</topic><topic>DNA</topic><topic>Fatty acids</topic><topic>Flagella</topic><topic>Genomes</topic><topic>Genomic analysis</topic><topic>Gram stain</topic><topic>Hybridization</topic><topic>Life Sciences</topic><topic>Lipids</topic><topic>Marine sediments</topic><topic>Microbiology</topic><topic>New species</topic><topic>Nucleotides</topic><topic>Phosphatidylethanolamine</topic><topic>Phosphatidylglycerol</topic><topic>Phylogeny</topic><topic>Quinones</topic><topic>rRNA 16S</topic><topic>Sodium chloride</topic><topic>Ubiquinone</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Kim, Minji</creatorcontrib><creatorcontrib>Lee, Ki-Eun</creatorcontrib><creatorcontrib>Cha, In-Tae</creatorcontrib><creatorcontrib>Kim, Eui Tae</creatorcontrib><creatorcontrib>Park, Soo-Je</creatorcontrib><collection>CrossRef</collection><collection>ProQuest Central (Corporate)</collection><collection>Bacteriology Abstracts (Microbiology B)</collection><collection>Industrial and Applied Microbiology Abstracts (Microbiology A)</collection><collection>Neurosciences Abstracts</collection><collection>Nucleic Acids Abstracts</collection><collection>Virology and AIDS Abstracts</collection><collection>ProQuest Health & Medical Collection</collection><collection>ProQuest Central (purchase pre-March 2016)</collection><collection>Biology Database (Alumni Edition)</collection><collection>Medical Database (Alumni Edition)</collection><collection>ProQuest Pharma Collection</collection><collection>Technology Research Database</collection><collection>ProQuest SciTech Collection</collection><collection>ProQuest Natural Science Collection</collection><collection>Hospital Premium Collection</collection><collection>Hospital Premium Collection (Alumni Edition)</collection><collection>ProQuest Central (Alumni) (purchase pre-March 2016)</collection><collection>Research Library (Alumni Edition)</collection><collection>ProQuest Central (Alumni)</collection><collection>ProQuest Central UK/Ireland</collection><collection>ProQuest Central Essentials</collection><collection>Biological Science Collection</collection><collection>ProQuest Central</collection><collection>ProQuest Natural Science Collection</collection><collection>Environmental Sciences and Pollution Management</collection><collection>ProQuest One Community College</collection><collection>ProQuest Central</collection><collection>Engineering Research Database</collection><collection>Health Research Premium Collection</collection><collection>Health Research Premium Collection (Alumni)</collection><collection>ProQuest Central Student</collection><collection>Research Library Prep</collection><collection>AIDS and Cancer Research Abstracts</collection><collection>SciTech Premium Collection</collection><collection>ProQuest Health & Medical Complete (Alumni)</collection><collection>ProQuest Biological Science Collection</collection><collection>Health & Medical Collection (Alumni Edition)</collection><collection>PML(ProQuest Medical Library)</collection><collection>ProQuest research library</collection><collection>Algology Mycology and Protozoology Abstracts (Microbiology C)</collection><collection>ProQuest Biological Science Journals</collection><collection>Research Library (Corporate)</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>ProQuest One Academic Eastern Edition (DO NOT USE)</collection><collection>ProQuest One Academic</collection><collection>ProQuest One Academic UKI Edition</collection><collection>ProQuest Central Basic</collection><collection>Genetics Abstracts</collection><collection>MEDLINE - Academic</collection><jtitle>Current microbiology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Kim, Minji</au><au>Lee, Ki-Eun</au><au>Cha, In-Tae</au><au>Kim, Eui Tae</au><au>Park, Soo-Je</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Salinimonas marina sp. nov. Isolated from Jeju Island Marine Sediment</atitle><jtitle>Current microbiology</jtitle><stitle>Curr Microbiol</stitle><date>2021-08-01</date><risdate>2021</risdate><volume>78</volume><issue>8</issue><spage>3321</spage><epage>3327</epage><pages>3321-3327</pages><issn>0343-8651</issn><eissn>1432-0991</eissn><abstract>A Gram-stain-negative, rod-shaped, and strictly aerobic bacterium designated strain G2-b
T
was isolated from the marine sediment around Jeju Island, South Korea. Strain G2-b
T
was found to be catalase- and oxidase-positive, white-pigmented, motile with polar flagellum, and to grow optimally at 25 °C, pH 7.0 in the presence of 4% (w/v) NaCl. Phylogenetic analysis based on the 16S rRNA gene sequence revealed that strain G2-b
T
belongs to the genus
Salinimonas
and was closely related
Salinimonas sediminis
N102
T
(96.7% sequence similarity),
Salinimonas iocasae
KX18D6
T
(95.4%),
Salinimonas lutimaris
DPSR-4
T
(94.7%), and
Salinimonas chungwhensis
BH030046
T
(94.6%). Strain G2-b
T
possessed ubiquinone 8 as the sole respiratory quinone, summed feature 3 and summed feature 8 as the major fatty acids, and phosphatidylethanolamine and phosphatidylglycerol as the major polar lipids. The genome size and G + C content of the strain G2-b
T
were determined to be 3,765,169 bp, and 49.7%, respectively, as a complete circular genome. Based on the genomic analyses (e.g., average nucleotide identity and digital DNA–DNA hybridization), the strain G2-B
T
likely represents a new species in the genus
Salinimonas
, for which we propose to name this novel bacterium
Salinimonas marina
sp. nov., and the type strain is designated G2-B
T
(= KCTC 72817
T
= VTCC 910110
T
).</abstract><cop>New York</cop><pub>Springer US</pub><doi>10.1007/s00284-021-02576-9</doi><tpages>7</tpages><orcidid>https://orcid.org/0000-0003-0359-7431</orcidid></addata></record> |
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| ispartof | Current microbiology, 2021-08, Vol.78 (8), p.3321-3327 |
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| language | eng |
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| source | SpringerNature Journals |
| subjects | Bacteria Biomedical and Life Sciences Biotechnology Catalase Deoxyribonucleic acid DNA Fatty acids Flagella Genomes Genomic analysis Gram stain Hybridization Life Sciences Lipids Marine sediments Microbiology New species Nucleotides Phosphatidylethanolamine Phosphatidylglycerol Phylogeny Quinones rRNA 16S Sodium chloride Ubiquinone |
| title | Salinimonas marina sp. nov. Isolated from Jeju Island Marine Sediment |
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