Geographical vs. ecological diversification in Carex section Phacocystis (Cyperaceae): Patterns hidden behind a twisted taxonomy
Carex section Phacocystis (Cyperaceae) is one of the most diverse and taxonomically complex groups of sedges (between 116 and 147 species), with a worldwide distribution in a wide array of biomes. It has a very complicated taxonomic history, with numerous disagreements among different treatments. We...
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creator | Benítez‐Benítez, Carmen Martín‐Bravo, Santiago Bjorå, Charlotte S. Gebauer, Sebastian Hipp, Andrew L. Hoffmann, Matthias H. Luceño, Modesto Pedersen, Tyril M. Reznicek, Anton Roalson, Eric Volkova, Polina Yano, Okihito Spalink, Daniel Jiménez‐Mejías, Pedro |
description | Carex section Phacocystis (Cyperaceae) is one of the most diverse and taxonomically complex groups of sedges (between 116 and 147 species), with a worldwide distribution in a wide array of biomes. It has a very complicated taxonomic history, with numerous disagreements among different treatments. We studied the biogeography and niche evolution in a phylogenetic framework to unveil the relative contribution of geographical and ecological drivers to diversification of the group. We used a large species sampling of the section (82% of extant species) to build a phylogeny based on four DNA regions, constrained with a phylogenomic HybSeq tree and dated with six fossil calibrations. Our phylogenetic results recovered section Phacocystis s.s. (core Phacocystis) as sister to section Praelongae. Ancestral area reconstruction points toward the N Pacific as the cradle for the crown diversification of section Phacocystis during the Middle Miocene. Wide distributions were recurrently inferred across deep nodes. Large Northern Hemisphere lineages with geographical congruence were retrieved, pointing toward the importance of allopatric divergence at deep phylogenetic levels, whereas within‐area speciation emerges as the predominant pattern at shallow phylogenetic level. The Southern Hemisphere (Neotropics, SW Pacific) was colonized several times from the Northern Hemisphere. The global expansion of Carex section Phacocystis did not entail major ecological changes along the inner branches of the phylogeny. Nevertheless, ecological differentiation seems to gain importance toward recent times. |
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It has a very complicated taxonomic history, with numerous disagreements among different treatments. We studied the biogeography and niche evolution in a phylogenetic framework to unveil the relative contribution of geographical and ecological drivers to diversification of the group. We used a large species sampling of the section (82% of extant species) to build a phylogeny based on four DNA regions, constrained with a phylogenomic HybSeq tree and dated with six fossil calibrations. Our phylogenetic results recovered section Phacocystis s.s. (core Phacocystis) as sister to section Praelongae. Ancestral area reconstruction points toward the N Pacific as the cradle for the crown diversification of section Phacocystis during the Middle Miocene. Wide distributions were recurrently inferred across deep nodes. Large Northern Hemisphere lineages with geographical congruence were retrieved, pointing toward the importance of allopatric divergence at deep phylogenetic levels, whereas within‐area speciation emerges as the predominant pattern at shallow phylogenetic level. The Southern Hemisphere (Neotropics, SW Pacific) was colonized several times from the Northern Hemisphere. The global expansion of Carex section Phacocystis did not entail major ecological changes along the inner branches of the phylogeny. Nevertheless, ecological differentiation seems to gain importance toward recent times.</description><identifier>ISSN: 1674-4918</identifier><identifier>EISSN: 1759-6831</identifier><identifier>DOI: 10.1111/jse.12731</identifier><language>eng</language><publisher>Beijing: Wiley Subscription Services, Inc</publisher><subject>allopatric speciation ; biogeographic stochastic mapping ; Biogeography ; biome ; Carex ; Cyperaceae ; Deoxyribonucleic acid ; Divergence ; Diversification ; DNA ; Ecology ; Geographical distribution ; Miocene ; niche evolution ; Northern Hemisphere ; Phylogenetics ; Phylogeny ; sedges ; Southern Hemisphere ; Speciation ; Species ; sympatric speciation ; Taxonomy</subject><ispartof>Journal of systematics and evolution : JSE, 2021-07, Vol.59 (4), p.642-667</ispartof><rights>2021 Institute of Botany, Chinese Academy of Sciences</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c2971-1730067e453e1d94b561bc421510a2cc56f91607615f4f81a68f595308e1e8053</citedby><cites>FETCH-LOGICAL-c2971-1730067e453e1d94b561bc421510a2cc56f91607615f4f81a68f595308e1e8053</cites><orcidid>0000-0002-0336-4083 ; 0000-0003-3250-568X ; 0000-0001-9515-2530 ; 0000-0003-2815-4477 ; 0000-0003-4956-0343 ; 0000-0001-9017-9494 ; 0000-0003-1655-3681 ; 0000-0001-5750-0127 ; 0000-0002-1241-9904 ; 0000-0002-9467-6225 ; 0000-0003-0626-0770 ; 0000-0003-2051-0406</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://onlinelibrary.wiley.com/doi/pdf/10.1111%2Fjse.12731$$EPDF$$P50$$Gwiley$$H</linktopdf><linktohtml>$$Uhttps://onlinelibrary.wiley.com/doi/full/10.1111%2Fjse.12731$$EHTML$$P50$$Gwiley$$H</linktohtml><link.rule.ids>314,777,781,1412,27905,27906,45555,45556</link.rule.ids></links><search><creatorcontrib>Benítez‐Benítez, Carmen</creatorcontrib><creatorcontrib>Martín‐Bravo, Santiago</creatorcontrib><creatorcontrib>Bjorå, Charlotte S.</creatorcontrib><creatorcontrib>Gebauer, Sebastian</creatorcontrib><creatorcontrib>Hipp, Andrew L.</creatorcontrib><creatorcontrib>Hoffmann, Matthias H.</creatorcontrib><creatorcontrib>Luceño, Modesto</creatorcontrib><creatorcontrib>Pedersen, Tyril M.</creatorcontrib><creatorcontrib>Reznicek, Anton</creatorcontrib><creatorcontrib>Roalson, Eric</creatorcontrib><creatorcontrib>Volkova, Polina</creatorcontrib><creatorcontrib>Yano, Okihito</creatorcontrib><creatorcontrib>Spalink, Daniel</creatorcontrib><creatorcontrib>Jiménez‐Mejías, Pedro</creatorcontrib><title>Geographical vs. ecological diversification in Carex section Phacocystis (Cyperaceae): Patterns hidden behind a twisted taxonomy</title><title>Journal of systematics and evolution : JSE</title><description>Carex section Phacocystis (Cyperaceae) is one of the most diverse and taxonomically complex groups of sedges (between 116 and 147 species), with a worldwide distribution in a wide array of biomes. It has a very complicated taxonomic history, with numerous disagreements among different treatments. We studied the biogeography and niche evolution in a phylogenetic framework to unveil the relative contribution of geographical and ecological drivers to diversification of the group. We used a large species sampling of the section (82% of extant species) to build a phylogeny based on four DNA regions, constrained with a phylogenomic HybSeq tree and dated with six fossil calibrations. Our phylogenetic results recovered section Phacocystis s.s. (core Phacocystis) as sister to section Praelongae. Ancestral area reconstruction points toward the N Pacific as the cradle for the crown diversification of section Phacocystis during the Middle Miocene. Wide distributions were recurrently inferred across deep nodes. Large Northern Hemisphere lineages with geographical congruence were retrieved, pointing toward the importance of allopatric divergence at deep phylogenetic levels, whereas within‐area speciation emerges as the predominant pattern at shallow phylogenetic level. The Southern Hemisphere (Neotropics, SW Pacific) was colonized several times from the Northern Hemisphere. The global expansion of Carex section Phacocystis did not entail major ecological changes along the inner branches of the phylogeny. Nevertheless, ecological differentiation seems to gain importance toward recent times.</description><subject>allopatric speciation</subject><subject>biogeographic stochastic mapping</subject><subject>Biogeography</subject><subject>biome</subject><subject>Carex</subject><subject>Cyperaceae</subject><subject>Deoxyribonucleic acid</subject><subject>Divergence</subject><subject>Diversification</subject><subject>DNA</subject><subject>Ecology</subject><subject>Geographical distribution</subject><subject>Miocene</subject><subject>niche evolution</subject><subject>Northern Hemisphere</subject><subject>Phylogenetics</subject><subject>Phylogeny</subject><subject>sedges</subject><subject>Southern Hemisphere</subject><subject>Speciation</subject><subject>Species</subject><subject>sympatric speciation</subject><subject>Taxonomy</subject><issn>1674-4918</issn><issn>1759-6831</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2021</creationdate><recordtype>article</recordtype><recordid>eNp1kD1PwzAQhiMEEqUw8A8ssdAhbS6JnZgNVaWAKlEJmCPXuTSu0jjYpm02fjppw8otd-_puQ-9nncLwRi6mGwsjiFMIjjzBpBQ7rM0gvOuZknsxxzSS-_K2k0QsCRN2MD7maNeG9GUSoqK7OyYoNSVXp9krnZorCo64ZSuiarJVBg8EIvy1FiWQmrZWqcsuZ-2DRohUeDogSyFc2hqS0qV51iTFZaqzokgbq-sw5w4cdC13rbX3kUhKos3f3nofT7NPqbP_uJt_jJ9XPgy5An4kETHnzGmEULO4xVlsJJxCBQCEUpJWcGBBQkDWsRFCoKlBeU0ClIETAMaDb27fm9j9Nc3Wpdt9Lepu5NZSGnIeRQD66hRT0mjrTVYZI1RW2HaDILsaHDWGZydDO7YSc_uVYXt_2D2-j7rJ34Bbc184g</recordid><startdate>202107</startdate><enddate>202107</enddate><creator>Benítez‐Benítez, Carmen</creator><creator>Martín‐Bravo, Santiago</creator><creator>Bjorå, Charlotte S.</creator><creator>Gebauer, Sebastian</creator><creator>Hipp, Andrew L.</creator><creator>Hoffmann, Matthias H.</creator><creator>Luceño, Modesto</creator><creator>Pedersen, Tyril M.</creator><creator>Reznicek, Anton</creator><creator>Roalson, Eric</creator><creator>Volkova, Polina</creator><creator>Yano, Okihito</creator><creator>Spalink, Daniel</creator><creator>Jiménez‐Mejías, Pedro</creator><general>Wiley Subscription Services, Inc</general><scope>AAYXX</scope><scope>CITATION</scope><scope>7ST</scope><scope>8FD</scope><scope>C1K</scope><scope>FR3</scope><scope>P64</scope><scope>RC3</scope><scope>SOI</scope><orcidid>https://orcid.org/0000-0002-0336-4083</orcidid><orcidid>https://orcid.org/0000-0003-3250-568X</orcidid><orcidid>https://orcid.org/0000-0001-9515-2530</orcidid><orcidid>https://orcid.org/0000-0003-2815-4477</orcidid><orcidid>https://orcid.org/0000-0003-4956-0343</orcidid><orcidid>https://orcid.org/0000-0001-9017-9494</orcidid><orcidid>https://orcid.org/0000-0003-1655-3681</orcidid><orcidid>https://orcid.org/0000-0001-5750-0127</orcidid><orcidid>https://orcid.org/0000-0002-1241-9904</orcidid><orcidid>https://orcid.org/0000-0002-9467-6225</orcidid><orcidid>https://orcid.org/0000-0003-0626-0770</orcidid><orcidid>https://orcid.org/0000-0003-2051-0406</orcidid></search><sort><creationdate>202107</creationdate><title>Geographical vs. ecological diversification in Carex section Phacocystis (Cyperaceae): Patterns hidden behind a twisted taxonomy</title><author>Benítez‐Benítez, Carmen ; 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It has a very complicated taxonomic history, with numerous disagreements among different treatments. We studied the biogeography and niche evolution in a phylogenetic framework to unveil the relative contribution of geographical and ecological drivers to diversification of the group. We used a large species sampling of the section (82% of extant species) to build a phylogeny based on four DNA regions, constrained with a phylogenomic HybSeq tree and dated with six fossil calibrations. Our phylogenetic results recovered section Phacocystis s.s. (core Phacocystis) as sister to section Praelongae. Ancestral area reconstruction points toward the N Pacific as the cradle for the crown diversification of section Phacocystis during the Middle Miocene. Wide distributions were recurrently inferred across deep nodes. Large Northern Hemisphere lineages with geographical congruence were retrieved, pointing toward the importance of allopatric divergence at deep phylogenetic levels, whereas within‐area speciation emerges as the predominant pattern at shallow phylogenetic level. The Southern Hemisphere (Neotropics, SW Pacific) was colonized several times from the Northern Hemisphere. The global expansion of Carex section Phacocystis did not entail major ecological changes along the inner branches of the phylogeny. 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subjects | allopatric speciation biogeographic stochastic mapping Biogeography biome Carex Cyperaceae Deoxyribonucleic acid Divergence Diversification DNA Ecology Geographical distribution Miocene niche evolution Northern Hemisphere Phylogenetics Phylogeny sedges Southern Hemisphere Speciation Species sympatric speciation Taxonomy |
title | Geographical vs. ecological diversification in Carex section Phacocystis (Cyperaceae): Patterns hidden behind a twisted taxonomy |
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