Cotton pan-genome retrieves the lost sequences and genes during domestication and selection

Background Millennia of directional human selection has reshaped the genomic architecture of cultivated cotton relative to wild counterparts, but we have limited understanding of the selective retention and fractionation of genomic components. Results We construct a comprehensive genomic variome bas...

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Veröffentlicht in:	Genome Biology 2021-04, Vol.22 (1), p.119-26, Article 119
Hauptverfasser:	Li, Jianying, Yuan, Daojun, Wang, Pengcheng, Wang, Qiongqiong, Sun, Mengling, Liu, Zhenping, Si, Huan, Xu, Zhongping, Ma, Yizan, Zhang, Boyang, Pei, Liuling, Tu, Lili, Zhu, Longfu, Chen, Ling-Ling, Lindsey, Keith, Zhang, Xianlong, Jin, Shuangxia, Wang, Maojun
Format:	Artikel
Sprache:	eng
Schlagworte:	Analysis Biotechnology & Applied Microbiology Copy number variation (CNV) Cotton Cultivars Divergence DNA Copy Number Variations Domestication Gene loci Genes Genes, Plant Genetic diversity Genetic engineering Genetic research Genetic Variation Genetics & Heredity Genetics, Population Genome, Plant Genome-Wide Association Study Genomes Genomics Genomics - methods Gossypium - genetics Gossypium hirsutum Improvement INDEL Mutation Life Sciences & Biomedicine Pan-genome Phenotype Plant Breeding Polymorphism, Single Nucleotide Population Presence/absence variation (PAV) Science & Technology Selection, Genetic
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