Ultrafast structural dynamics of in-cage isomerization of diiodomethane in solution
Despite extensive studies on the isomer species formed by photodissociation of haloalkanes in solution, the molecular structure of the precursor of the isomer, which is often assumed to be a vibrationally hot isomer formed from the radical pair, and its in-cage isomerization mechanism remain elusive...
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creator | Kim, Hanui Kim, Jong Goo Kim, Tae Wu Lee, Sang Jin Nozawa, Shunsuke Adachi, Shin-ichi Yoon, Kihwan Kim, Joonghan Ihee, Hyotcherl |
description | Despite extensive studies on the isomer species formed by photodissociation of haloalkanes in solution, the molecular structure of the precursor of the isomer, which is often assumed to be a vibrationally hot isomer formed from the radical pair, and its in-cage isomerization mechanism remain elusive. Here, the structural dynamics of CH
2
I
2
upon 267 nm photoexcitation in methanol were probed with femtosecond X-ray solution scattering at an X-ray free-electron laser. The determined molecular structure of the transiently formed species that converts to the CH
2
I-I isomer has the I-I distance of 4.17 Å, which is longer than that of the isomer (3.15 Å) by more than 1.0 Å and the mean-squared displacement of 0.45 Å
2
, which is about 100 times larger than those of typical regular chemical bonds. These unusual structural characteristics are consistent with either a vibrationally hot form of the CH
2
I-I isomer or the loosely-bound radical pair (CH
2
I&z.rad; I&z.rad;).
The structural dynamics of in-cage isomerization of CH
2
I
2
and the unusual structure of the loosely-bound isomer precursor were unveiled with femtosecond X-ray liquidography (solution scattering). |
doi_str_mv | 10.1039/d0sc05108j |
format | Article |
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2
I
2
upon 267 nm photoexcitation in methanol were probed with femtosecond X-ray solution scattering at an X-ray free-electron laser. The determined molecular structure of the transiently formed species that converts to the CH
2
I-I isomer has the I-I distance of 4.17 Å, which is longer than that of the isomer (3.15 Å) by more than 1.0 Å and the mean-squared displacement of 0.45 Å
2
, which is about 100 times larger than those of typical regular chemical bonds. These unusual structural characteristics are consistent with either a vibrationally hot form of the CH
2
I-I isomer or the loosely-bound radical pair (CH
2
I&z.rad; I&z.rad;).
The structural dynamics of in-cage isomerization of CH
2
I
2
and the unusual structure of the loosely-bound isomer precursor were unveiled with femtosecond X-ray liquidography (solution scattering).</description><identifier>ISSN: 2041-6520</identifier><identifier>EISSN: 2041-6539</identifier><identifier>DOI: 10.1039/d0sc05108j</identifier><identifier>PMID: 34163975</identifier><language>eng</language><publisher>England: Royal Society of Chemistry</publisher><subject>Cages ; Chemical bonds ; Chemistry ; Free electron lasers ; Isomerization ; Molecular structure ; Photodissociation ; Photoexcitation ; Radicals</subject><ispartof>Chemical science (Cambridge), 2020-12, Vol.12 (6), p.2114-212</ispartof><rights>This journal is © The Royal Society of Chemistry.</rights><rights>Copyright Royal Society of Chemistry 2021</rights><rights>This journal is © The Royal Society of Chemistry 2021 The Royal Society of Chemistry</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c494t-d54967f026ebded7c6a2d8afe5d5920218e512f21fca3cf1f497c48af9bd84cf3</citedby><cites>FETCH-LOGICAL-c494t-d54967f026ebded7c6a2d8afe5d5920218e512f21fca3cf1f497c48af9bd84cf3</cites><orcidid>0000-0002-7783-0200 ; 0000-0003-0397-5965 ; 0000-0002-6370-0907</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC8179290/pdf/$$EPDF$$P50$$Gpubmedcentral$$Hfree_for_read</linktopdf><linktohtml>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC8179290/$$EHTML$$P50$$Gpubmedcentral$$Hfree_for_read</linktohtml><link.rule.ids>230,314,727,780,784,864,885,27924,27925,53791,53793</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/34163975$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Kim, Hanui</creatorcontrib><creatorcontrib>Kim, Jong Goo</creatorcontrib><creatorcontrib>Kim, Tae Wu</creatorcontrib><creatorcontrib>Lee, Sang Jin</creatorcontrib><creatorcontrib>Nozawa, Shunsuke</creatorcontrib><creatorcontrib>Adachi, Shin-ichi</creatorcontrib><creatorcontrib>Yoon, Kihwan</creatorcontrib><creatorcontrib>Kim, Joonghan</creatorcontrib><creatorcontrib>Ihee, Hyotcherl</creatorcontrib><title>Ultrafast structural dynamics of in-cage isomerization of diiodomethane in solution</title><title>Chemical science (Cambridge)</title><addtitle>Chem Sci</addtitle><description>Despite extensive studies on the isomer species formed by photodissociation of haloalkanes in solution, the molecular structure of the precursor of the isomer, which is often assumed to be a vibrationally hot isomer formed from the radical pair, and its in-cage isomerization mechanism remain elusive. Here, the structural dynamics of CH
2
I
2
upon 267 nm photoexcitation in methanol were probed with femtosecond X-ray solution scattering at an X-ray free-electron laser. The determined molecular structure of the transiently formed species that converts to the CH
2
I-I isomer has the I-I distance of 4.17 Å, which is longer than that of the isomer (3.15 Å) by more than 1.0 Å and the mean-squared displacement of 0.45 Å
2
, which is about 100 times larger than those of typical regular chemical bonds. These unusual structural characteristics are consistent with either a vibrationally hot form of the CH
2
I-I isomer or the loosely-bound radical pair (CH
2
I&z.rad; I&z.rad;).
The structural dynamics of in-cage isomerization of CH
2
I
2
and the unusual structure of the loosely-bound isomer precursor were unveiled with femtosecond X-ray liquidography (solution scattering).</description><subject>Cages</subject><subject>Chemical bonds</subject><subject>Chemistry</subject><subject>Free electron lasers</subject><subject>Isomerization</subject><subject>Molecular structure</subject><subject>Photodissociation</subject><subject>Photoexcitation</subject><subject>Radicals</subject><issn>2041-6520</issn><issn>2041-6539</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2020</creationdate><recordtype>article</recordtype><recordid>eNpdkUtLAzEUhYMotlQ37pUBNyKM5jkz2QhS3xRcqOuQ5mFTZiY1mRH015tarY-7ySXn43APB4A9BE8QJPxUw6ggQ7Cab4AhhhTlBSN8c71jOAC7Mc5hGkIQw-U2GBCKCsJLNgQPT3UXpJWxy2IXetX1QdaZfmtl41TMvM1cmyv5bDIXfWOCe5ed8-1S0M55nf66mWyT3GbR1_1S3AFbVtbR7H69I_B0dfk4vskn99e34_NJriinXa4Z5UVpIS7MVBtdqkJiXUlrmGYcQ4wqwxC2GFklibLIUl4qmgA-1RVVlozA2cp30U8bo5VpU5RaLIJrZHgTXjrxV2ndTDz7V1GhkmMOk8HRl0HwL72JnWhcVKauUyDfR4EZpVXJUUkTevgPnfs-tCmewJRDVnDCWaKOV5QKPsZg7PoYBMWyLnEBH8afdd0l-OD3-Wv0u5wE7K-AENVa_embfACrBZwV</recordid><startdate>20201207</startdate><enddate>20201207</enddate><creator>Kim, Hanui</creator><creator>Kim, Jong Goo</creator><creator>Kim, Tae Wu</creator><creator>Lee, Sang Jin</creator><creator>Nozawa, Shunsuke</creator><creator>Adachi, Shin-ichi</creator><creator>Yoon, Kihwan</creator><creator>Kim, Joonghan</creator><creator>Ihee, Hyotcherl</creator><general>Royal Society of Chemistry</general><general>The Royal Society of Chemistry</general><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7SR</scope><scope>8BQ</scope><scope>8FD</scope><scope>JG9</scope><scope>7X8</scope><scope>5PM</scope><orcidid>https://orcid.org/0000-0002-7783-0200</orcidid><orcidid>https://orcid.org/0000-0003-0397-5965</orcidid><orcidid>https://orcid.org/0000-0002-6370-0907</orcidid></search><sort><creationdate>20201207</creationdate><title>Ultrafast structural dynamics of in-cage isomerization of diiodomethane in solution</title><author>Kim, Hanui ; Kim, Jong Goo ; Kim, Tae Wu ; Lee, Sang Jin ; Nozawa, Shunsuke ; Adachi, Shin-ichi ; Yoon, Kihwan ; Kim, Joonghan ; Ihee, Hyotcherl</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c494t-d54967f026ebded7c6a2d8afe5d5920218e512f21fca3cf1f497c48af9bd84cf3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2020</creationdate><topic>Cages</topic><topic>Chemical bonds</topic><topic>Chemistry</topic><topic>Free electron lasers</topic><topic>Isomerization</topic><topic>Molecular structure</topic><topic>Photodissociation</topic><topic>Photoexcitation</topic><topic>Radicals</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Kim, Hanui</creatorcontrib><creatorcontrib>Kim, Jong Goo</creatorcontrib><creatorcontrib>Kim, Tae Wu</creatorcontrib><creatorcontrib>Lee, Sang Jin</creatorcontrib><creatorcontrib>Nozawa, Shunsuke</creatorcontrib><creatorcontrib>Adachi, Shin-ichi</creatorcontrib><creatorcontrib>Yoon, Kihwan</creatorcontrib><creatorcontrib>Kim, Joonghan</creatorcontrib><creatorcontrib>Ihee, Hyotcherl</creatorcontrib><collection>PubMed</collection><collection>CrossRef</collection><collection>Engineered Materials Abstracts</collection><collection>METADEX</collection><collection>Technology Research Database</collection><collection>Materials Research Database</collection><collection>MEDLINE - Academic</collection><collection>PubMed Central (Full Participant titles)</collection><jtitle>Chemical science (Cambridge)</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Kim, Hanui</au><au>Kim, Jong Goo</au><au>Kim, Tae Wu</au><au>Lee, Sang Jin</au><au>Nozawa, Shunsuke</au><au>Adachi, Shin-ichi</au><au>Yoon, Kihwan</au><au>Kim, Joonghan</au><au>Ihee, Hyotcherl</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Ultrafast structural dynamics of in-cage isomerization of diiodomethane in solution</atitle><jtitle>Chemical science (Cambridge)</jtitle><addtitle>Chem Sci</addtitle><date>2020-12-07</date><risdate>2020</risdate><volume>12</volume><issue>6</issue><spage>2114</spage><epage>212</epage><pages>2114-212</pages><issn>2041-6520</issn><eissn>2041-6539</eissn><abstract>Despite extensive studies on the isomer species formed by photodissociation of haloalkanes in solution, the molecular structure of the precursor of the isomer, which is often assumed to be a vibrationally hot isomer formed from the radical pair, and its in-cage isomerization mechanism remain elusive. Here, the structural dynamics of CH
2
I
2
upon 267 nm photoexcitation in methanol were probed with femtosecond X-ray solution scattering at an X-ray free-electron laser. The determined molecular structure of the transiently formed species that converts to the CH
2
I-I isomer has the I-I distance of 4.17 Å, which is longer than that of the isomer (3.15 Å) by more than 1.0 Å and the mean-squared displacement of 0.45 Å
2
, which is about 100 times larger than those of typical regular chemical bonds. These unusual structural characteristics are consistent with either a vibrationally hot form of the CH
2
I-I isomer or the loosely-bound radical pair (CH
2
I&z.rad; I&z.rad;).
The structural dynamics of in-cage isomerization of CH
2
I
2
and the unusual structure of the loosely-bound isomer precursor were unveiled with femtosecond X-ray liquidography (solution scattering).</abstract><cop>England</cop><pub>Royal Society of Chemistry</pub><pmid>34163975</pmid><doi>10.1039/d0sc05108j</doi><tpages>7</tpages><orcidid>https://orcid.org/0000-0002-7783-0200</orcidid><orcidid>https://orcid.org/0000-0003-0397-5965</orcidid><orcidid>https://orcid.org/0000-0002-6370-0907</orcidid><oa>free_for_read</oa></addata></record> |
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subjects | Cages Chemical bonds Chemistry Free electron lasers Isomerization Molecular structure Photodissociation Photoexcitation Radicals |
title | Ultrafast structural dynamics of in-cage isomerization of diiodomethane in solution |
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