Single step separation and concentration of biomarker proteins using agarose based miniaturized isoelectric gates for point of care diagnostics
•Isoelectric trapping using agarose pH gates for rapid runtimes at a low voltage.•Targeted separation using pH gates tuned to the isoelectric point of the biomarker.•Separation of low concentration protein in high protein load without precipitation. Bedside diagnostics using protein biomarkers requi...
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container_title | Sensors and actuators. B, Chemical |
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creator | Damodara, Sreekant Dwivedi, Dhruva J. Liaw, Patricia C. Fox-Robichaud, Alison E. Selvaganapathy, P. Ravi |
description | •Isoelectric trapping using agarose pH gates for rapid runtimes at a low voltage.•Targeted separation using pH gates tuned to the isoelectric point of the biomarker.•Separation of low concentration protein in high protein load without precipitation.
Bedside diagnostics using protein biomarkers requires rapid concentration, isolation and measurement of these specific biomarkers from a complex matrix in a low cost and portable manner. Traditional separation using gel electrophoresis separates the sample into all its constituent elements and requires high voltages and/or long runtime which is often unnecessary for diagnostics where only a specific biomarker needs to be quantified. Digital isoelectric trapping can be used to isolate and concentrate proteins but requires UV cured immobiline gels that have defined pH values and are not tunable to target specific proteins. Here, we have developed miniaturized isoelectric gates to separate, concentrate and quantify a targeted biomarker based on its isoelectric point, from a complex matrix in under 20 min. We designed specific isoelectric gates to concentrate and quantify bovine serum albumin (BSA) at a concentration of 1−5 mg/mL with a peak concentration of over 300 mg/mL, while maintaining its solubility. Next, we have demonstrated isolation of human protein C from a mixture with 1000-fold higher concentration of BSA with no additional processing. Finally, we have demonstrated rapid (< 20 min) separation, concentration and quantification of ovomucoid in a fresh hen egg using dual isoelectric gates at pH 3.9 and 4.3 to trap ovomucoid with an isoelectric point of 4.1 using a low applied voltage of only 15 V. By using low cost agarose gels instead of expensive immobilines, this device reduced the cost and complexity of separation. The combination of low-cost, tunability, fast-runtime, low-operating voltage makes this technique attractive for use in point-of-care biomarker detection without specific antibody tags. |
doi_str_mv | 10.1016/j.snb.2020.129265 |
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Bedside diagnostics using protein biomarkers requires rapid concentration, isolation and measurement of these specific biomarkers from a complex matrix in a low cost and portable manner. Traditional separation using gel electrophoresis separates the sample into all its constituent elements and requires high voltages and/or long runtime which is often unnecessary for diagnostics where only a specific biomarker needs to be quantified. Digital isoelectric trapping can be used to isolate and concentrate proteins but requires UV cured immobiline gels that have defined pH values and are not tunable to target specific proteins. Here, we have developed miniaturized isoelectric gates to separate, concentrate and quantify a targeted biomarker based on its isoelectric point, from a complex matrix in under 20 min. We designed specific isoelectric gates to concentrate and quantify bovine serum albumin (BSA) at a concentration of 1−5 mg/mL with a peak concentration of over 300 mg/mL, while maintaining its solubility. Next, we have demonstrated isolation of human protein C from a mixture with 1000-fold higher concentration of BSA with no additional processing. Finally, we have demonstrated rapid (< 20 min) separation, concentration and quantification of ovomucoid in a fresh hen egg using dual isoelectric gates at pH 3.9 and 4.3 to trap ovomucoid with an isoelectric point of 4.1 using a low applied voltage of only 15 V. By using low cost agarose gels instead of expensive immobilines, this device reduced the cost and complexity of separation. The combination of low-cost, tunability, fast-runtime, low-operating voltage makes this technique attractive for use in point-of-care biomarker detection without specific antibody tags.</description><identifier>ISSN: 0925-4005</identifier><identifier>EISSN: 1873-3077</identifier><identifier>DOI: 10.1016/j.snb.2020.129265</identifier><language>eng</language><publisher>Lausanne: Elsevier B.V</publisher><subject>Antibodies ; Biomarker concentration ; Biomarker detection ; Biomarkers ; Complexity ; Electrophoresis ; Fluorescent microscopy ; Gates ; Gels ; Isoelectric focusing ; Low cost ; Low cost sensing ; Microfluidics ; Ovalbumin ; Point-of-care testing ; Protein C ; Proteins ; Separation ; Serum albumin</subject><ispartof>Sensors and actuators. B, Chemical, 2021-03, Vol.330, p.129265, Article 129265</ispartof><rights>2020 Elsevier B.V.</rights><rights>Copyright Elsevier Science Ltd. Mar 1, 2021</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c325t-bc065be61beecf87f7a31c3dec8a0bc05715596560850076006776e49a6f83593</citedby><cites>FETCH-LOGICAL-c325t-bc065be61beecf87f7a31c3dec8a0bc05715596560850076006776e49a6f83593</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktohtml>$$Uhttps://dx.doi.org/10.1016/j.snb.2020.129265$$EHTML$$P50$$Gelsevier$$H</linktohtml><link.rule.ids>314,780,784,3550,27924,27925,45995</link.rule.ids></links><search><creatorcontrib>Damodara, Sreekant</creatorcontrib><creatorcontrib>Dwivedi, Dhruva J.</creatorcontrib><creatorcontrib>Liaw, Patricia C.</creatorcontrib><creatorcontrib>Fox-Robichaud, Alison E.</creatorcontrib><creatorcontrib>Selvaganapathy, P. Ravi</creatorcontrib><creatorcontrib>on behalf of the Canadian Critical Care Translational Biology Group</creatorcontrib><title>Single step separation and concentration of biomarker proteins using agarose based miniaturized isoelectric gates for point of care diagnostics</title><title>Sensors and actuators. B, Chemical</title><description>•Isoelectric trapping using agarose pH gates for rapid runtimes at a low voltage.•Targeted separation using pH gates tuned to the isoelectric point of the biomarker.•Separation of low concentration protein in high protein load without precipitation.
Bedside diagnostics using protein biomarkers requires rapid concentration, isolation and measurement of these specific biomarkers from a complex matrix in a low cost and portable manner. Traditional separation using gel electrophoresis separates the sample into all its constituent elements and requires high voltages and/or long runtime which is often unnecessary for diagnostics where only a specific biomarker needs to be quantified. Digital isoelectric trapping can be used to isolate and concentrate proteins but requires UV cured immobiline gels that have defined pH values and are not tunable to target specific proteins. Here, we have developed miniaturized isoelectric gates to separate, concentrate and quantify a targeted biomarker based on its isoelectric point, from a complex matrix in under 20 min. We designed specific isoelectric gates to concentrate and quantify bovine serum albumin (BSA) at a concentration of 1−5 mg/mL with a peak concentration of over 300 mg/mL, while maintaining its solubility. Next, we have demonstrated isolation of human protein C from a mixture with 1000-fold higher concentration of BSA with no additional processing. Finally, we have demonstrated rapid (< 20 min) separation, concentration and quantification of ovomucoid in a fresh hen egg using dual isoelectric gates at pH 3.9 and 4.3 to trap ovomucoid with an isoelectric point of 4.1 using a low applied voltage of only 15 V. By using low cost agarose gels instead of expensive immobilines, this device reduced the cost and complexity of separation. The combination of low-cost, tunability, fast-runtime, low-operating voltage makes this technique attractive for use in point-of-care biomarker detection without specific antibody tags.</description><subject>Antibodies</subject><subject>Biomarker concentration</subject><subject>Biomarker detection</subject><subject>Biomarkers</subject><subject>Complexity</subject><subject>Electrophoresis</subject><subject>Fluorescent microscopy</subject><subject>Gates</subject><subject>Gels</subject><subject>Isoelectric focusing</subject><subject>Low cost</subject><subject>Low cost sensing</subject><subject>Microfluidics</subject><subject>Ovalbumin</subject><subject>Point-of-care testing</subject><subject>Protein C</subject><subject>Proteins</subject><subject>Separation</subject><subject>Serum albumin</subject><issn>0925-4005</issn><issn>1873-3077</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2021</creationdate><recordtype>article</recordtype><recordid>eNp9kMFuFDEMQCMEEkvhA7hF4jyLM9kkM-oJVaVUqtRD4RxlMp6Vl22yxFmk8hP8crPannuy7PjZ8RPis4K1AmW_7tacpnUPfcv7sbfmjVipwelOg3NvxQrG3nQbAPNefGDeAcBGW1iJ_w-UtnuUXPEgGQ-hhEo5yZBmGXOKmOpLJS9yovwYym8s8lByRUosj9x4GbahZEY5BcZZPlKiUI-F_rWEOOMeYy0U5TZUZLnkxmdK9TQyhoJyprBNmStF_ijeLWHP-OklXohf369_Xv3o7u5vbq--3XVR96Z2UwRrJrRqQozL4BYXtIp6xjgEaI_GKWNGaywMBsBZAOucxc0Y7DJoM-oL8eU8t13y54hc_S4fS2orfb8ZRg1DD6p1qXNXbOdxwcUfCjUFT16BP3n3O9-8-5N3f_bemMszg-37fwmL50jYTM5Umgc_Z3qFfgaORI3a</recordid><startdate>20210301</startdate><enddate>20210301</enddate><creator>Damodara, Sreekant</creator><creator>Dwivedi, Dhruva J.</creator><creator>Liaw, Patricia C.</creator><creator>Fox-Robichaud, Alison E.</creator><creator>Selvaganapathy, P. Ravi</creator><general>Elsevier B.V</general><general>Elsevier Science Ltd</general><scope>AAYXX</scope><scope>CITATION</scope><scope>7SP</scope><scope>7SR</scope><scope>7TB</scope><scope>7U5</scope><scope>8BQ</scope><scope>8FD</scope><scope>FR3</scope><scope>JG9</scope><scope>L7M</scope></search><sort><creationdate>20210301</creationdate><title>Single step separation and concentration of biomarker proteins using agarose based miniaturized isoelectric gates for point of care diagnostics</title><author>Damodara, Sreekant ; Dwivedi, Dhruva J. ; Liaw, Patricia C. ; Fox-Robichaud, Alison E. ; Selvaganapathy, P. Ravi</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c325t-bc065be61beecf87f7a31c3dec8a0bc05715596560850076006776e49a6f83593</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2021</creationdate><topic>Antibodies</topic><topic>Biomarker concentration</topic><topic>Biomarker detection</topic><topic>Biomarkers</topic><topic>Complexity</topic><topic>Electrophoresis</topic><topic>Fluorescent microscopy</topic><topic>Gates</topic><topic>Gels</topic><topic>Isoelectric focusing</topic><topic>Low cost</topic><topic>Low cost sensing</topic><topic>Microfluidics</topic><topic>Ovalbumin</topic><topic>Point-of-care testing</topic><topic>Protein C</topic><topic>Proteins</topic><topic>Separation</topic><topic>Serum albumin</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Damodara, Sreekant</creatorcontrib><creatorcontrib>Dwivedi, Dhruva J.</creatorcontrib><creatorcontrib>Liaw, Patricia C.</creatorcontrib><creatorcontrib>Fox-Robichaud, Alison E.</creatorcontrib><creatorcontrib>Selvaganapathy, P. Ravi</creatorcontrib><creatorcontrib>on behalf of the Canadian Critical Care Translational Biology Group</creatorcontrib><collection>CrossRef</collection><collection>Electronics & Communications Abstracts</collection><collection>Engineered Materials Abstracts</collection><collection>Mechanical & Transportation Engineering Abstracts</collection><collection>Solid State and Superconductivity Abstracts</collection><collection>METADEX</collection><collection>Technology Research Database</collection><collection>Engineering Research Database</collection><collection>Materials Research Database</collection><collection>Advanced Technologies Database with Aerospace</collection><jtitle>Sensors and actuators. B, Chemical</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Damodara, Sreekant</au><au>Dwivedi, Dhruva J.</au><au>Liaw, Patricia C.</au><au>Fox-Robichaud, Alison E.</au><au>Selvaganapathy, P. Ravi</au><aucorp>on behalf of the Canadian Critical Care Translational Biology Group</aucorp><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Single step separation and concentration of biomarker proteins using agarose based miniaturized isoelectric gates for point of care diagnostics</atitle><jtitle>Sensors and actuators. B, Chemical</jtitle><date>2021-03-01</date><risdate>2021</risdate><volume>330</volume><spage>129265</spage><pages>129265-</pages><artnum>129265</artnum><issn>0925-4005</issn><eissn>1873-3077</eissn><abstract>•Isoelectric trapping using agarose pH gates for rapid runtimes at a low voltage.•Targeted separation using pH gates tuned to the isoelectric point of the biomarker.•Separation of low concentration protein in high protein load without precipitation.
Bedside diagnostics using protein biomarkers requires rapid concentration, isolation and measurement of these specific biomarkers from a complex matrix in a low cost and portable manner. Traditional separation using gel electrophoresis separates the sample into all its constituent elements and requires high voltages and/or long runtime which is often unnecessary for diagnostics where only a specific biomarker needs to be quantified. Digital isoelectric trapping can be used to isolate and concentrate proteins but requires UV cured immobiline gels that have defined pH values and are not tunable to target specific proteins. Here, we have developed miniaturized isoelectric gates to separate, concentrate and quantify a targeted biomarker based on its isoelectric point, from a complex matrix in under 20 min. We designed specific isoelectric gates to concentrate and quantify bovine serum albumin (BSA) at a concentration of 1−5 mg/mL with a peak concentration of over 300 mg/mL, while maintaining its solubility. Next, we have demonstrated isolation of human protein C from a mixture with 1000-fold higher concentration of BSA with no additional processing. Finally, we have demonstrated rapid (< 20 min) separation, concentration and quantification of ovomucoid in a fresh hen egg using dual isoelectric gates at pH 3.9 and 4.3 to trap ovomucoid with an isoelectric point of 4.1 using a low applied voltage of only 15 V. By using low cost agarose gels instead of expensive immobilines, this device reduced the cost and complexity of separation. The combination of low-cost, tunability, fast-runtime, low-operating voltage makes this technique attractive for use in point-of-care biomarker detection without specific antibody tags.</abstract><cop>Lausanne</cop><pub>Elsevier B.V</pub><doi>10.1016/j.snb.2020.129265</doi></addata></record> |
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subjects | Antibodies Biomarker concentration Biomarker detection Biomarkers Complexity Electrophoresis Fluorescent microscopy Gates Gels Isoelectric focusing Low cost Low cost sensing Microfluidics Ovalbumin Point-of-care testing Protein C Proteins Separation Serum albumin |
title | Single step separation and concentration of biomarker proteins using agarose based miniaturized isoelectric gates for point of care diagnostics |
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