Old Catharanthus roseus culture (14 years) produced somatic embryos and plants and showed normal genome size; demonstrated an increased antioxidant defense mechanism; and synthesized stress proteins as biochemical, proteomics, and flow-cytometry studies reveal
Various strategies have been developed globally to conserve germplasm by propagating plants. One important technique is in vitro propagation and preservation through tissue culture. In many investigated plants, the long in vitro conservation is plagued with several limitations like genetic variation...
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description | Various strategies have been developed globally to conserve germplasm by propagating plants. One important technique is in vitro propagation and preservation through tissue culture. In many investigated plants, the long in vitro conservation is plagued with several limitations like genetic variations, developmental errors in cells or tissues due to induced stress. This provoked us to conduct a study of
Catharanthus roseus
culture maintained for over fourteen long years and a newly established 8-month-old culture. The present study investigated and compared the two tissue types differing by their age. The biomass accumulation, the biochemical differences of the two, dead cell analysis with aging via confocal microscopy, and liquid chromatography-mass spectroscopy (LC-MS)-based proteomic differences were studied in old and newly established
Catharanthus
culture. The proteomic study reveals more than 120 upregulated or high abundance proteins in old culture as compared to newly established
Catharanthus
. The identified upregulated proteins are stress protein 69, heat shock proteins (HSP), isocitrate dehydrogenase, pyruvate dehydrogenase, and others. These proteins had an association with antioxidant activities, related to stress, and a few are linked to respiration. Our study reveals the presence of a robust antioxidant defense mechanism, i.e., 51.94%, 78.8%, and 61% higher SOD, APX, and CAT activities in older cultures (O) as compared to newly established tissues (N), which perhaps act against stress and may play a key role in ameliorating negative impacts of long-term in vitro conditions. The inherent strong antioxidant defense system in old cultures added resilience and enabled the culture to revive growth quickly (within 1–2 days) following transfer to new medium as compared to new culture (7–10 days). The biomass accumulation was more (37.08 %) in old tissues as compared to new culture. The 2C DNA or genome size of
C. roseus
especially the 14-year-old culture–derived regenerated plant was measured by flow cytometry. The 2C DNA size of this
Catharanthus
(old culture) plant is 1.516 pg, which is very similar to new culture–derived plants’ and field-grown plants’ genome size. No anomaly in genome size was noted in plants of old culture, as opposed to common perception. |
doi_str_mv | 10.1007/s13353-020-00590-4 |
format | Article |
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Catharanthus roseus
culture maintained for over fourteen long years and a newly established 8-month-old culture. The present study investigated and compared the two tissue types differing by their age. The biomass accumulation, the biochemical differences of the two, dead cell analysis with aging via confocal microscopy, and liquid chromatography-mass spectroscopy (LC-MS)-based proteomic differences were studied in old and newly established
Catharanthus
culture. The proteomic study reveals more than 120 upregulated or high abundance proteins in old culture as compared to newly established
Catharanthus
. The identified upregulated proteins are stress protein 69, heat shock proteins (HSP), isocitrate dehydrogenase, pyruvate dehydrogenase, and others. These proteins had an association with antioxidant activities, related to stress, and a few are linked to respiration. Our study reveals the presence of a robust antioxidant defense mechanism, i.e., 51.94%, 78.8%, and 61% higher SOD, APX, and CAT activities in older cultures (O) as compared to newly established tissues (N), which perhaps act against stress and may play a key role in ameliorating negative impacts of long-term in vitro conditions. The inherent strong antioxidant defense system in old cultures added resilience and enabled the culture to revive growth quickly (within 1–2 days) following transfer to new medium as compared to new culture (7–10 days). The biomass accumulation was more (37.08 %) in old tissues as compared to new culture. The 2C DNA or genome size of
C. roseus
especially the 14-year-old culture–derived regenerated plant was measured by flow cytometry. The 2C DNA size of this
Catharanthus
(old culture) plant is 1.516 pg, which is very similar to new culture–derived plants’ and field-grown plants’ genome size. No anomaly in genome size was noted in plants of old culture, as opposed to common perception.</description><identifier>ISSN: 1234-1983</identifier><identifier>EISSN: 2190-3883</identifier><identifier>DOI: 10.1007/s13353-020-00590-4</identifier><identifier>PMID: 33145639</identifier><language>eng</language><publisher>Berlin/Heidelberg: Springer Berlin Heidelberg</publisher><subject>Accumulation ; Aging ; Analysis ; Animal Genetics and Genomics ; Antioxidants ; Biomass ; Biomedical and Life Sciences ; Catharanthus ; Catharanthus roseus ; Cell culture ; Confocal microscopy ; Defense mechanisms ; Dehydrogenase ; Dehydrogenases ; Deoxyribonucleic acid ; DNA ; Embryonic development ; Embryos ; Flow cytometry ; Genetic diversity ; Genomes ; Genomics ; Germplasm ; Heat shock proteins ; Human Genetics ; Isocitrate dehydrogenase ; Life Sciences ; Liquid chromatography ; Mass spectroscopy ; Microbial Genetics and Genomics ; Plant genetics ; Plant Genetics and Genomics ; Plant Genetics • Original Paper ; Plant propagation ; Propagation ; Proteins ; Proteomics ; Pyruvic acid ; Somatic embryos ; Stress proteins ; Tissue culture ; Tissues</subject><ispartof>Journal of applied genetics, 2021-02, Vol.62 (1), p.43-57</ispartof><rights>Institute of Plant Genetics, Polish Academy of Sciences, Poznan 2020</rights><rights>COPYRIGHT 2021 Springer</rights><rights>Institute of Plant Genetics, Polish Academy of Sciences, Poznan 2020.</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c442t-7a4d8dc90b35cbe0275b498143d7c50617d677b05c4f2f9214ca6a4db601a2473</citedby><cites>FETCH-LOGICAL-c442t-7a4d8dc90b35cbe0275b498143d7c50617d677b05c4f2f9214ca6a4db601a2473</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://link.springer.com/content/pdf/10.1007/s13353-020-00590-4$$EPDF$$P50$$Gspringer$$H</linktopdf><linktohtml>$$Uhttps://link.springer.com/10.1007/s13353-020-00590-4$$EHTML$$P50$$Gspringer$$H</linktohtml><link.rule.ids>314,776,780,27903,27904,41467,42536,51297</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/33145639$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Gulzar, Basit</creatorcontrib><creatorcontrib>Mujib, A.</creatorcontrib><creatorcontrib>Mushtaq, Zeenat</creatorcontrib><creatorcontrib>Malik, Moien Qadir</creatorcontrib><title>Old Catharanthus roseus culture (14 years) produced somatic embryos and plants and showed normal genome size; demonstrated an increased antioxidant defense mechanism; and synthesized stress proteins as biochemical, proteomics, and flow-cytometry studies reveal</title><title>Journal of applied genetics</title><addtitle>J Appl Genetics</addtitle><addtitle>J Appl Genet</addtitle><description>Various strategies have been developed globally to conserve germplasm by propagating plants. One important technique is in vitro propagation and preservation through tissue culture. In many investigated plants, the long in vitro conservation is plagued with several limitations like genetic variations, developmental errors in cells or tissues due to induced stress. This provoked us to conduct a study of
Catharanthus roseus
culture maintained for over fourteen long years and a newly established 8-month-old culture. The present study investigated and compared the two tissue types differing by their age. The biomass accumulation, the biochemical differences of the two, dead cell analysis with aging via confocal microscopy, and liquid chromatography-mass spectroscopy (LC-MS)-based proteomic differences were studied in old and newly established
Catharanthus
culture. The proteomic study reveals more than 120 upregulated or high abundance proteins in old culture as compared to newly established
Catharanthus
. The identified upregulated proteins are stress protein 69, heat shock proteins (HSP), isocitrate dehydrogenase, pyruvate dehydrogenase, and others. These proteins had an association with antioxidant activities, related to stress, and a few are linked to respiration. Our study reveals the presence of a robust antioxidant defense mechanism, i.e., 51.94%, 78.8%, and 61% higher SOD, APX, and CAT activities in older cultures (O) as compared to newly established tissues (N), which perhaps act against stress and may play a key role in ameliorating negative impacts of long-term in vitro conditions. The inherent strong antioxidant defense system in old cultures added resilience and enabled the culture to revive growth quickly (within 1–2 days) following transfer to new medium as compared to new culture (7–10 days). The biomass accumulation was more (37.08 %) in old tissues as compared to new culture. The 2C DNA or genome size of
C. roseus
especially the 14-year-old culture–derived regenerated plant was measured by flow cytometry. The 2C DNA size of this
Catharanthus
(old culture) plant is 1.516 pg, which is very similar to new culture–derived plants’ and field-grown plants’ genome size. No anomaly in genome size was noted in plants of old culture, as opposed to common perception.</description><subject>Accumulation</subject><subject>Aging</subject><subject>Analysis</subject><subject>Animal Genetics and Genomics</subject><subject>Antioxidants</subject><subject>Biomass</subject><subject>Biomedical and Life Sciences</subject><subject>Catharanthus</subject><subject>Catharanthus roseus</subject><subject>Cell culture</subject><subject>Confocal microscopy</subject><subject>Defense mechanisms</subject><subject>Dehydrogenase</subject><subject>Dehydrogenases</subject><subject>Deoxyribonucleic acid</subject><subject>DNA</subject><subject>Embryonic development</subject><subject>Embryos</subject><subject>Flow cytometry</subject><subject>Genetic diversity</subject><subject>Genomes</subject><subject>Genomics</subject><subject>Germplasm</subject><subject>Heat shock proteins</subject><subject>Human Genetics</subject><subject>Isocitrate dehydrogenase</subject><subject>Life Sciences</subject><subject>Liquid chromatography</subject><subject>Mass spectroscopy</subject><subject>Microbial Genetics and Genomics</subject><subject>Plant genetics</subject><subject>Plant Genetics and Genomics</subject><subject>Plant Genetics • Original Paper</subject><subject>Plant propagation</subject><subject>Propagation</subject><subject>Proteins</subject><subject>Proteomics</subject><subject>Pyruvic acid</subject><subject>Somatic embryos</subject><subject>Stress proteins</subject><subject>Tissue culture</subject><subject>Tissues</subject><issn>1234-1983</issn><issn>2190-3883</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2021</creationdate><recordtype>article</recordtype><recordid>eNp9Uk1v1DAQDaiILoU_wAFZ4gJSU-zY-VJP1YovqVIvcI4ce7LrKrEXj0NZfj2zm0KFhLAPM7bfm3m2X5a9FPxCcF6_QyFlKXNe8JzzsuW5epytCkGJbBp5kq1EIVUu2kaeZs8QbzmXjaqLp9mplEKVlWxXj05uRsvWOm111D5tZ2QxIFAw85jmCOyNUGwPOuJbtovBzgYswzDp5AyDqY_7gEx7y3Yj8ZcUt-GOUD7ESY9sAz5MwND9hEtmYQoeU9SJANoz500EjcdFcuGHsxQJNYBHYBOYrfYOp8ul7p4UwqEQ5SkC4kFSAuepL7LeBbOFyRk9ni8HgRZ4fuQOY7jLzT6RlBT3RJ-tA7osfAc9Ps-eDHpEeHEfz7KvH95_WX_Kr28-fl5fXedGqSLltVa2sablvSxND7yoy161jVDS1qbklahtVdc9L40aiqEthDK6Ik5fcaELVcuz7PVSl9R9mwFTdxvm6KllV6iGH0bTPqA2eoTO-SHQe5nJoemuasGrqpVlQ6iLf6Bo2sMTBA-Do_2_CMVCMPTDGGHodtFNOu47wbuDn7rFTx35qTv6qVNEenWveO4nsH8ovw1EALkAkI78BuLDlf5T9he3Y9qG</recordid><startdate>20210201</startdate><enddate>20210201</enddate><creator>Gulzar, Basit</creator><creator>Mujib, A.</creator><creator>Mushtaq, Zeenat</creator><creator>Malik, Moien Qadir</creator><general>Springer Berlin Heidelberg</general><general>Springer</general><general>Springer Nature B.V</general><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope></search><sort><creationdate>20210201</creationdate><title>Old Catharanthus roseus culture (14 years) produced somatic embryos and plants and showed normal genome size; demonstrated an increased antioxidant defense mechanism; and synthesized stress proteins as biochemical, proteomics, and flow-cytometry studies reveal</title><author>Gulzar, Basit ; Mujib, A. ; Mushtaq, Zeenat ; Malik, Moien Qadir</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c442t-7a4d8dc90b35cbe0275b498143d7c50617d677b05c4f2f9214ca6a4db601a2473</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2021</creationdate><topic>Accumulation</topic><topic>Aging</topic><topic>Analysis</topic><topic>Animal Genetics and Genomics</topic><topic>Antioxidants</topic><topic>Biomass</topic><topic>Biomedical and Life Sciences</topic><topic>Catharanthus</topic><topic>Catharanthus roseus</topic><topic>Cell culture</topic><topic>Confocal microscopy</topic><topic>Defense mechanisms</topic><topic>Dehydrogenase</topic><topic>Dehydrogenases</topic><topic>Deoxyribonucleic acid</topic><topic>DNA</topic><topic>Embryonic development</topic><topic>Embryos</topic><topic>Flow cytometry</topic><topic>Genetic diversity</topic><topic>Genomes</topic><topic>Genomics</topic><topic>Germplasm</topic><topic>Heat shock proteins</topic><topic>Human Genetics</topic><topic>Isocitrate dehydrogenase</topic><topic>Life Sciences</topic><topic>Liquid chromatography</topic><topic>Mass spectroscopy</topic><topic>Microbial Genetics and Genomics</topic><topic>Plant genetics</topic><topic>Plant Genetics and Genomics</topic><topic>Plant Genetics • Original Paper</topic><topic>Plant propagation</topic><topic>Propagation</topic><topic>Proteins</topic><topic>Proteomics</topic><topic>Pyruvic acid</topic><topic>Somatic embryos</topic><topic>Stress proteins</topic><topic>Tissue culture</topic><topic>Tissues</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Gulzar, Basit</creatorcontrib><creatorcontrib>Mujib, A.</creatorcontrib><creatorcontrib>Mushtaq, Zeenat</creatorcontrib><creatorcontrib>Malik, Moien Qadir</creatorcontrib><collection>PubMed</collection><collection>CrossRef</collection><jtitle>Journal of applied genetics</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Gulzar, Basit</au><au>Mujib, A.</au><au>Mushtaq, Zeenat</au><au>Malik, Moien Qadir</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Old Catharanthus roseus culture (14 years) produced somatic embryos and plants and showed normal genome size; demonstrated an increased antioxidant defense mechanism; and synthesized stress proteins as biochemical, proteomics, and flow-cytometry studies reveal</atitle><jtitle>Journal of applied genetics</jtitle><stitle>J Appl Genetics</stitle><addtitle>J Appl Genet</addtitle><date>2021-02-01</date><risdate>2021</risdate><volume>62</volume><issue>1</issue><spage>43</spage><epage>57</epage><pages>43-57</pages><issn>1234-1983</issn><eissn>2190-3883</eissn><abstract>Various strategies have been developed globally to conserve germplasm by propagating plants. One important technique is in vitro propagation and preservation through tissue culture. In many investigated plants, the long in vitro conservation is plagued with several limitations like genetic variations, developmental errors in cells or tissues due to induced stress. This provoked us to conduct a study of
Catharanthus roseus
culture maintained for over fourteen long years and a newly established 8-month-old culture. The present study investigated and compared the two tissue types differing by their age. The biomass accumulation, the biochemical differences of the two, dead cell analysis with aging via confocal microscopy, and liquid chromatography-mass spectroscopy (LC-MS)-based proteomic differences were studied in old and newly established
Catharanthus
culture. The proteomic study reveals more than 120 upregulated or high abundance proteins in old culture as compared to newly established
Catharanthus
. The identified upregulated proteins are stress protein 69, heat shock proteins (HSP), isocitrate dehydrogenase, pyruvate dehydrogenase, and others. These proteins had an association with antioxidant activities, related to stress, and a few are linked to respiration. Our study reveals the presence of a robust antioxidant defense mechanism, i.e., 51.94%, 78.8%, and 61% higher SOD, APX, and CAT activities in older cultures (O) as compared to newly established tissues (N), which perhaps act against stress and may play a key role in ameliorating negative impacts of long-term in vitro conditions. The inherent strong antioxidant defense system in old cultures added resilience and enabled the culture to revive growth quickly (within 1–2 days) following transfer to new medium as compared to new culture (7–10 days). The biomass accumulation was more (37.08 %) in old tissues as compared to new culture. The 2C DNA or genome size of
C. roseus
especially the 14-year-old culture–derived regenerated plant was measured by flow cytometry. The 2C DNA size of this
Catharanthus
(old culture) plant is 1.516 pg, which is very similar to new culture–derived plants’ and field-grown plants’ genome size. No anomaly in genome size was noted in plants of old culture, as opposed to common perception.</abstract><cop>Berlin/Heidelberg</cop><pub>Springer Berlin Heidelberg</pub><pmid>33145639</pmid><doi>10.1007/s13353-020-00590-4</doi><tpages>15</tpages></addata></record> |
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subjects | Accumulation Aging Analysis Animal Genetics and Genomics Antioxidants Biomass Biomedical and Life Sciences Catharanthus Catharanthus roseus Cell culture Confocal microscopy Defense mechanisms Dehydrogenase Dehydrogenases Deoxyribonucleic acid DNA Embryonic development Embryos Flow cytometry Genetic diversity Genomes Genomics Germplasm Heat shock proteins Human Genetics Isocitrate dehydrogenase Life Sciences Liquid chromatography Mass spectroscopy Microbial Genetics and Genomics Plant genetics Plant Genetics and Genomics Plant Genetics • Original Paper Plant propagation Propagation Proteins Proteomics Pyruvic acid Somatic embryos Stress proteins Tissue culture Tissues |
title | Old Catharanthus roseus culture (14 years) produced somatic embryos and plants and showed normal genome size; demonstrated an increased antioxidant defense mechanism; and synthesized stress proteins as biochemical, proteomics, and flow-cytometry studies reveal |
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