Sequevar distribution of Ralstonia spp. in Solanaceae in the semiarid climate of the Pernambuco state, Brazil
The phylogenetic relationships and distribution of Ralstonia pseudosolanacearum and Ralstonia solanacearum sequevars were analyzed in 108 strains of Solanaceae in three mesoregions of the Pernambuco State, Brazil. These mesoregions are characterized by a semiarid climate and account for 88.20% of th...
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| Veröffentlicht in: | European journal of plant pathology 2021, Vol.159 (1), p.13-25 |
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| creator | Albuquerque, Greecy Mirian R. Silva, Adriano M. F. Silva, Jéssica R. Melo, Edilaine A. Mariano, Rosa L. R. Lemos, Maria Cristina Ferraz, Edinardo Souza, Elineide B. |
| description | The phylogenetic relationships and distribution of
Ralstonia pseudosolanacearum
and
Ralstonia solanacearum
sequevars were analyzed in 108 strains of Solanaceae in three mesoregions of the Pernambuco State, Brazil. These mesoregions are characterized by a semiarid climate and account for 88.20% of the area of the state.
Ralstonia pseudosolanacearum
(phylotype I, biovar 3) was predominant in Agreste, and
R. solanacearum
(phylotype II, biovar 1) was predominant in São Francisco and Sertão. Two haplotypes of
R. pseudosolanacearum
were identified by analysis of the haplotype network of the partial
egl
gene sequences and were phylogenetically related to sequevars I-17 and I-18. Five haplotypes of
R. solanacearum
were identified; two haplotypes were related to sequevar IIA-50, and three haplotypes were related to new sequevars IIA-61, IIA-62, and IIA-63. In Brazil, sequevars I-17, IIA-61, IIA-62, and IIA-63 were detected exclusively in the semiarid climate of Pernambuco, unlike sequevars I-18 and IIA-50, which were detected in other regions of Brazil. Furthermore,
R. pseudosolanacearum
(phylotype I) and sequevar IIA-50 were detected in the Sertão mesoregion. Sequevar I-18, IIA-61, and IIA-62 strains were prevalent in the Agreste mesoregion, and sequevars I-17 and IIA-50 were prevalent in the São Francisco mesoregion. The virulence variability of the strains toward tomato was related to species and sequevars. Introduced
R. pseudosolanacearum
strains of sequevar I-18 had higher estimated virulence compared to that of the native
R. solanacearum
strains of sequevar IIA-50. This is the first study that analyzes the variability of
Ralstonia
spp. in the semiarid region of Brazil. |
| doi_str_mv | 10.1007/s10658-020-02132-4 |
| format | Article |
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Ralstonia pseudosolanacearum
and
Ralstonia solanacearum
sequevars were analyzed in 108 strains of Solanaceae in three mesoregions of the Pernambuco State, Brazil. These mesoregions are characterized by a semiarid climate and account for 88.20% of the area of the state.
Ralstonia pseudosolanacearum
(phylotype I, biovar 3) was predominant in Agreste, and
R. solanacearum
(phylotype II, biovar 1) was predominant in São Francisco and Sertão. Two haplotypes of
R. pseudosolanacearum
were identified by analysis of the haplotype network of the partial
egl
gene sequences and were phylogenetically related to sequevars I-17 and I-18. Five haplotypes of
R. solanacearum
were identified; two haplotypes were related to sequevar IIA-50, and three haplotypes were related to new sequevars IIA-61, IIA-62, and IIA-63. In Brazil, sequevars I-17, IIA-61, IIA-62, and IIA-63 were detected exclusively in the semiarid climate of Pernambuco, unlike sequevars I-18 and IIA-50, which were detected in other regions of Brazil. Furthermore,
R. pseudosolanacearum
(phylotype I) and sequevar IIA-50 were detected in the Sertão mesoregion. Sequevar I-18, IIA-61, and IIA-62 strains were prevalent in the Agreste mesoregion, and sequevars I-17 and IIA-50 were prevalent in the São Francisco mesoregion. The virulence variability of the strains toward tomato was related to species and sequevars. Introduced
R. pseudosolanacearum
strains of sequevar I-18 had higher estimated virulence compared to that of the native
R. solanacearum
strains of sequevar IIA-50. This is the first study that analyzes the variability of
Ralstonia
spp. in the semiarid region of Brazil.</description><identifier>ISSN: 0929-1873</identifier><identifier>EISSN: 1573-8469</identifier><identifier>DOI: 10.1007/s10658-020-02132-4</identifier><language>eng</language><publisher>Dordrecht: Springer Netherlands</publisher><subject>Agriculture ; Biomedical and Life Sciences ; Ecology ; Gene sequencing ; Haplotypes ; Introduced species ; Life Sciences ; Phylogeny ; Plant Pathology ; Plant Sciences ; Ralstonia pseudosolanacearum ; Semi arid areas ; Semiarid climates ; Semiarid lands ; Solanaceae ; Tomatoes ; Virulence</subject><ispartof>European journal of plant pathology, 2021, Vol.159 (1), p.13-25</ispartof><rights>Koninklijke Nederlandse Planteziektenkundige Vereniging 2020</rights><rights>Koninklijke Nederlandse Planteziektenkundige Vereniging 2020.</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c319t-945b6d91d5d82d47ea12691400424bf5812933014c8cc006c46f456b4415d8313</citedby><cites>FETCH-LOGICAL-c319t-945b6d91d5d82d47ea12691400424bf5812933014c8cc006c46f456b4415d8313</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://link.springer.com/content/pdf/10.1007/s10658-020-02132-4$$EPDF$$P50$$Gspringer$$H</linktopdf><linktohtml>$$Uhttps://link.springer.com/10.1007/s10658-020-02132-4$$EHTML$$P50$$Gspringer$$H</linktohtml><link.rule.ids>314,776,780,27901,27902,41464,42533,51294</link.rule.ids></links><search><creatorcontrib>Albuquerque, Greecy Mirian R.</creatorcontrib><creatorcontrib>Silva, Adriano M. F.</creatorcontrib><creatorcontrib>Silva, Jéssica R.</creatorcontrib><creatorcontrib>Melo, Edilaine A.</creatorcontrib><creatorcontrib>Mariano, Rosa L. R.</creatorcontrib><creatorcontrib>Lemos, Maria Cristina</creatorcontrib><creatorcontrib>Ferraz, Edinardo</creatorcontrib><creatorcontrib>Souza, Elineide B.</creatorcontrib><title>Sequevar distribution of Ralstonia spp. in Solanaceae in the semiarid climate of the Pernambuco state, Brazil</title><title>European journal of plant pathology</title><addtitle>Eur J Plant Pathol</addtitle><description>The phylogenetic relationships and distribution of
Ralstonia pseudosolanacearum
and
Ralstonia solanacearum
sequevars were analyzed in 108 strains of Solanaceae in three mesoregions of the Pernambuco State, Brazil. These mesoregions are characterized by a semiarid climate and account for 88.20% of the area of the state.
Ralstonia pseudosolanacearum
(phylotype I, biovar 3) was predominant in Agreste, and
R. solanacearum
(phylotype II, biovar 1) was predominant in São Francisco and Sertão. Two haplotypes of
R. pseudosolanacearum
were identified by analysis of the haplotype network of the partial
egl
gene sequences and were phylogenetically related to sequevars I-17 and I-18. Five haplotypes of
R. solanacearum
were identified; two haplotypes were related to sequevar IIA-50, and three haplotypes were related to new sequevars IIA-61, IIA-62, and IIA-63. In Brazil, sequevars I-17, IIA-61, IIA-62, and IIA-63 were detected exclusively in the semiarid climate of Pernambuco, unlike sequevars I-18 and IIA-50, which were detected in other regions of Brazil. Furthermore,
R. pseudosolanacearum
(phylotype I) and sequevar IIA-50 were detected in the Sertão mesoregion. Sequevar I-18, IIA-61, and IIA-62 strains were prevalent in the Agreste mesoregion, and sequevars I-17 and IIA-50 were prevalent in the São Francisco mesoregion. The virulence variability of the strains toward tomato was related to species and sequevars. Introduced
R. pseudosolanacearum
strains of sequevar I-18 had higher estimated virulence compared to that of the native
R. solanacearum
strains of sequevar IIA-50. This is the first study that analyzes the variability of
Ralstonia
spp. in the semiarid region of Brazil.</description><subject>Agriculture</subject><subject>Biomedical and Life Sciences</subject><subject>Ecology</subject><subject>Gene sequencing</subject><subject>Haplotypes</subject><subject>Introduced species</subject><subject>Life Sciences</subject><subject>Phylogeny</subject><subject>Plant Pathology</subject><subject>Plant Sciences</subject><subject>Ralstonia pseudosolanacearum</subject><subject>Semi arid areas</subject><subject>Semiarid climates</subject><subject>Semiarid lands</subject><subject>Solanaceae</subject><subject>Tomatoes</subject><subject>Virulence</subject><issn>0929-1873</issn><issn>1573-8469</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2021</creationdate><recordtype>article</recordtype><sourceid>BENPR</sourceid><recordid>eNp9kMtKBDEQRYMoOI7-gKuAW3tMJelHljr4ggHF0XVIp9OaoV8maUG_3rQtuHNRFFXcc6m6CJ0CWQEh-YUHkqVFQiiJBYwmfA8tIM1ZUvBM7KMFEVQkUOTsEB15vyMREoIuULs176P5UA5X1gdnyzHYvsN9jZ9U40PfWYX9MKyw7fC2b1SntFFmmsKbwd60VjlbYd3YVgUzcdP-0bhOteWoe-xD3J_jK6e-bHOMDupoa05--xK93Fw_r--SzcPt_fpyk2gGIiSCp2VWCajSqqAVz40CmgnghHDKyzotgArGCHBdaE1IpnlW8zQrOYdIMGBLdDb7Dq6P7_kgd_0YT2q8pDznogBgIqrorNKu996ZWg4uvuE-JRA5xSrnWGWMVf7EKnmE2Az5KO5ejfuz_of6Bopaeas</recordid><startdate>2021</startdate><enddate>2021</enddate><creator>Albuquerque, Greecy Mirian R.</creator><creator>Silva, Adriano M. F.</creator><creator>Silva, Jéssica R.</creator><creator>Melo, Edilaine A.</creator><creator>Mariano, Rosa L. R.</creator><creator>Lemos, Maria Cristina</creator><creator>Ferraz, Edinardo</creator><creator>Souza, Elineide B.</creator><general>Springer Netherlands</general><general>Springer Nature B.V</general><scope>AAYXX</scope><scope>CITATION</scope><scope>3V.</scope><scope>7QL</scope><scope>7T7</scope><scope>7U9</scope><scope>7X2</scope><scope>88A</scope><scope>8AO</scope><scope>8FD</scope><scope>8FE</scope><scope>8FH</scope><scope>8FK</scope><scope>ABUWG</scope><scope>AEUYN</scope><scope>AFKRA</scope><scope>ATCPS</scope><scope>AZQEC</scope><scope>BBNVY</scope><scope>BENPR</scope><scope>BHPHI</scope><scope>C1K</scope><scope>CCPQU</scope><scope>DWQXO</scope><scope>FR3</scope><scope>GNUQQ</scope><scope>H94</scope><scope>HCIFZ</scope><scope>LK8</scope><scope>M0K</scope><scope>M7N</scope><scope>M7P</scope><scope>P64</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope></search><sort><creationdate>2021</creationdate><title>Sequevar distribution of Ralstonia spp. in Solanaceae in the semiarid climate of the Pernambuco state, Brazil</title><author>Albuquerque, Greecy Mirian R. ; Silva, Adriano M. F. ; Silva, Jéssica R. ; Melo, Edilaine A. ; Mariano, Rosa L. 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F.</creatorcontrib><creatorcontrib>Silva, Jéssica R.</creatorcontrib><creatorcontrib>Melo, Edilaine A.</creatorcontrib><creatorcontrib>Mariano, Rosa L. 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F.</au><au>Silva, Jéssica R.</au><au>Melo, Edilaine A.</au><au>Mariano, Rosa L. R.</au><au>Lemos, Maria Cristina</au><au>Ferraz, Edinardo</au><au>Souza, Elineide B.</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Sequevar distribution of Ralstonia spp. in Solanaceae in the semiarid climate of the Pernambuco state, Brazil</atitle><jtitle>European journal of plant pathology</jtitle><stitle>Eur J Plant Pathol</stitle><date>2021</date><risdate>2021</risdate><volume>159</volume><issue>1</issue><spage>13</spage><epage>25</epage><pages>13-25</pages><issn>0929-1873</issn><eissn>1573-8469</eissn><abstract>The phylogenetic relationships and distribution of
Ralstonia pseudosolanacearum
and
Ralstonia solanacearum
sequevars were analyzed in 108 strains of Solanaceae in three mesoregions of the Pernambuco State, Brazil. These mesoregions are characterized by a semiarid climate and account for 88.20% of the area of the state.
Ralstonia pseudosolanacearum
(phylotype I, biovar 3) was predominant in Agreste, and
R. solanacearum
(phylotype II, biovar 1) was predominant in São Francisco and Sertão. Two haplotypes of
R. pseudosolanacearum
were identified by analysis of the haplotype network of the partial
egl
gene sequences and were phylogenetically related to sequevars I-17 and I-18. Five haplotypes of
R. solanacearum
were identified; two haplotypes were related to sequevar IIA-50, and three haplotypes were related to new sequevars IIA-61, IIA-62, and IIA-63. In Brazil, sequevars I-17, IIA-61, IIA-62, and IIA-63 were detected exclusively in the semiarid climate of Pernambuco, unlike sequevars I-18 and IIA-50, which were detected in other regions of Brazil. Furthermore,
R. pseudosolanacearum
(phylotype I) and sequevar IIA-50 were detected in the Sertão mesoregion. Sequevar I-18, IIA-61, and IIA-62 strains were prevalent in the Agreste mesoregion, and sequevars I-17 and IIA-50 were prevalent in the São Francisco mesoregion. The virulence variability of the strains toward tomato was related to species and sequevars. Introduced
R. pseudosolanacearum
strains of sequevar I-18 had higher estimated virulence compared to that of the native
R. solanacearum
strains of sequevar IIA-50. This is the first study that analyzes the variability of
Ralstonia
spp. in the semiarid region of Brazil.</abstract><cop>Dordrecht</cop><pub>Springer Netherlands</pub><doi>10.1007/s10658-020-02132-4</doi><tpages>13</tpages></addata></record> |
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| subjects | Agriculture Biomedical and Life Sciences Ecology Gene sequencing Haplotypes Introduced species Life Sciences Phylogeny Plant Pathology Plant Sciences Ralstonia pseudosolanacearum Semi arid areas Semiarid climates Semiarid lands Solanaceae Tomatoes Virulence |
| title | Sequevar distribution of Ralstonia spp. in Solanaceae in the semiarid climate of the Pernambuco state, Brazil |
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