Application of the parallel diagonal dominant algorithm for the incompressible Navier-Stokes equations
•Proved the applicability of the PDD algorithm for the incompressible Navier-Stokes equations.•Proved errors from the PDD algorithm are bounded regardless of diagonal dominance of tridiagonal matrices.•Investigated effects of the CFL number and the number of grid points on the accuracy.•Developed a...
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Veröffentlicht in: | Journal of computational physics 2020-12, Vol.423, p.109795, Article 109795 |
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creator | Moon, Hojun Hong, Seungpyo You, Donghyun |
description | •Proved the applicability of the PDD algorithm for the incompressible Navier-Stokes equations.•Proved errors from the PDD algorithm are bounded regardless of diagonal dominance of tridiagonal matrices.•Investigated effects of the CFL number and the number of grid points on the accuracy.•Developed a highly scalable ADI-PDD method by utilizing an aggregative data communication method.
The accuracy and the applicability of the parallel diagonal dominant (PDD) algorithm are explored for highly scalable computation of the incompressible Navier-Stokes equations which are integrated using a fully-implicit fractional-step method in parallel computational environments. The PDD algorithm is known to be applicable only for an evenly diagonal dominant matrix. In the present study, however, it is shown mathematically that the PDD algorithm is utilizable even for non-diagonal dominant matrices derived from discretization of incompressible momentum equations. The order of accuracy and the error characteristics are investigated in detail in terms of the Courant-Friedrichs-Lewy (CFL) number and the grid spacing by conducting simulations of decaying vortices in both two and three dimensions, flow in a lid-driven cavity, and flow over a circular cylinder. In order to reduce communication cost, which is one of bottlenecks in parallel computation, an aggregative data communication method is combined with the PDD algorithm. Parallel performance of the present PDD-based method is investigated by measuring the speedup, efficiency, overhead, and serial fraction. |
doi_str_mv | 10.1016/j.jcp.2020.109795 |
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The accuracy and the applicability of the parallel diagonal dominant (PDD) algorithm are explored for highly scalable computation of the incompressible Navier-Stokes equations which are integrated using a fully-implicit fractional-step method in parallel computational environments. The PDD algorithm is known to be applicable only for an evenly diagonal dominant matrix. In the present study, however, it is shown mathematically that the PDD algorithm is utilizable even for non-diagonal dominant matrices derived from discretization of incompressible momentum equations. The order of accuracy and the error characteristics are investigated in detail in terms of the Courant-Friedrichs-Lewy (CFL) number and the grid spacing by conducting simulations of decaying vortices in both two and three dimensions, flow in a lid-driven cavity, and flow over a circular cylinder. In order to reduce communication cost, which is one of bottlenecks in parallel computation, an aggregative data communication method is combined with the PDD algorithm. Parallel performance of the present PDD-based method is investigated by measuring the speedup, efficiency, overhead, and serial fraction.</description><identifier>ISSN: 0021-9991</identifier><identifier>EISSN: 1090-2716</identifier><identifier>DOI: 10.1016/j.jcp.2020.109795</identifier><language>eng</language><publisher>Cambridge: Elsevier Inc</publisher><subject>Accuracy ; Algorithms ; Alternating-direction-implicit (ADI) method ; Circular cylinders ; Computational fluid dynamics ; Computational physics ; Data communication ; Error analysis ; Flow control ; Fluid flow ; Fully-implicit method ; Mathematical analysis ; Matrix methods ; Navier-Stokes equations ; Parallel diagonal dominant (PDD) algorithm ; Parallel processing ; Three dimensional flow ; Tridiagonal matrix</subject><ispartof>Journal of computational physics, 2020-12, Vol.423, p.109795, Article 109795</ispartof><rights>2020 Elsevier Inc.</rights><rights>Copyright Elsevier Science Ltd. Dec 15, 2020</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c325t-b335a3f1c53428646a5f5d99e8ad388b1c21ba822ade76e7af4adf848c490d953</citedby><cites>FETCH-LOGICAL-c325t-b335a3f1c53428646a5f5d99e8ad388b1c21ba822ade76e7af4adf848c490d953</cites><orcidid>0000-0003-2470-5411</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktohtml>$$Uhttps://dx.doi.org/10.1016/j.jcp.2020.109795$$EHTML$$P50$$Gelsevier$$H</linktohtml><link.rule.ids>314,780,784,3550,27924,27925,45995</link.rule.ids></links><search><creatorcontrib>Moon, Hojun</creatorcontrib><creatorcontrib>Hong, Seungpyo</creatorcontrib><creatorcontrib>You, Donghyun</creatorcontrib><title>Application of the parallel diagonal dominant algorithm for the incompressible Navier-Stokes equations</title><title>Journal of computational physics</title><description>•Proved the applicability of the PDD algorithm for the incompressible Navier-Stokes equations.•Proved errors from the PDD algorithm are bounded regardless of diagonal dominance of tridiagonal matrices.•Investigated effects of the CFL number and the number of grid points on the accuracy.•Developed a highly scalable ADI-PDD method by utilizing an aggregative data communication method.
The accuracy and the applicability of the parallel diagonal dominant (PDD) algorithm are explored for highly scalable computation of the incompressible Navier-Stokes equations which are integrated using a fully-implicit fractional-step method in parallel computational environments. The PDD algorithm is known to be applicable only for an evenly diagonal dominant matrix. In the present study, however, it is shown mathematically that the PDD algorithm is utilizable even for non-diagonal dominant matrices derived from discretization of incompressible momentum equations. The order of accuracy and the error characteristics are investigated in detail in terms of the Courant-Friedrichs-Lewy (CFL) number and the grid spacing by conducting simulations of decaying vortices in both two and three dimensions, flow in a lid-driven cavity, and flow over a circular cylinder. In order to reduce communication cost, which is one of bottlenecks in parallel computation, an aggregative data communication method is combined with the PDD algorithm. Parallel performance of the present PDD-based method is investigated by measuring the speedup, efficiency, overhead, and serial fraction.</description><subject>Accuracy</subject><subject>Algorithms</subject><subject>Alternating-direction-implicit (ADI) method</subject><subject>Circular cylinders</subject><subject>Computational fluid dynamics</subject><subject>Computational physics</subject><subject>Data communication</subject><subject>Error analysis</subject><subject>Flow control</subject><subject>Fluid flow</subject><subject>Fully-implicit method</subject><subject>Mathematical analysis</subject><subject>Matrix methods</subject><subject>Navier-Stokes equations</subject><subject>Parallel diagonal dominant (PDD) algorithm</subject><subject>Parallel processing</subject><subject>Three dimensional flow</subject><subject>Tridiagonal matrix</subject><issn>0021-9991</issn><issn>1090-2716</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2020</creationdate><recordtype>article</recordtype><recordid>eNp9kEtPwzAQhC0EEqXwA7hF4pxiOy9bnKqKl1TBAThbG2fdOiRxaqdI_HsSwpnTzkozq52PkGtGV4yy_LZe1bpfccqnXRYyOyGLUdCYFyw_JQtKOYullOycXIRQU0pFlooFMeu-b6yGwbouciYa9hj14KFpsIkqCzvXwShcazvohgianfN22LeRcf7XbDvt2t5jCLZsMHqBL4s-fhvcJ4YID8ffy-GSnBloAl79zSX5eLh_3zzF29fH5816G-uEZ0NcJkkGiWE6S1Iu8jSHzGSVlCigSoQomeasBME5VFjkWIBJoTIiFTqVtJJZsiQ3893eu8MRw6Bqd_RjhaB4mkuRspHB6GKzS3sXgkejem9b8N-KUTXhVLUacaoJp5pxjpm7OYPj-1NHFbTFTmNlPepBVc7-k_4Bfs1-9A</recordid><startdate>20201215</startdate><enddate>20201215</enddate><creator>Moon, Hojun</creator><creator>Hong, Seungpyo</creator><creator>You, Donghyun</creator><general>Elsevier Inc</general><general>Elsevier Science Ltd</general><scope>AAYXX</scope><scope>CITATION</scope><scope>7SC</scope><scope>7SP</scope><scope>7U5</scope><scope>8FD</scope><scope>JQ2</scope><scope>L7M</scope><scope>L~C</scope><scope>L~D</scope><orcidid>https://orcid.org/0000-0003-2470-5411</orcidid></search><sort><creationdate>20201215</creationdate><title>Application of the parallel diagonal dominant algorithm for the incompressible Navier-Stokes equations</title><author>Moon, Hojun ; Hong, Seungpyo ; You, Donghyun</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c325t-b335a3f1c53428646a5f5d99e8ad388b1c21ba822ade76e7af4adf848c490d953</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2020</creationdate><topic>Accuracy</topic><topic>Algorithms</topic><topic>Alternating-direction-implicit (ADI) method</topic><topic>Circular cylinders</topic><topic>Computational fluid dynamics</topic><topic>Computational physics</topic><topic>Data communication</topic><topic>Error analysis</topic><topic>Flow control</topic><topic>Fluid flow</topic><topic>Fully-implicit method</topic><topic>Mathematical analysis</topic><topic>Matrix methods</topic><topic>Navier-Stokes equations</topic><topic>Parallel diagonal dominant (PDD) algorithm</topic><topic>Parallel processing</topic><topic>Three dimensional flow</topic><topic>Tridiagonal matrix</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Moon, Hojun</creatorcontrib><creatorcontrib>Hong, Seungpyo</creatorcontrib><creatorcontrib>You, Donghyun</creatorcontrib><collection>CrossRef</collection><collection>Computer and Information Systems Abstracts</collection><collection>Electronics & Communications Abstracts</collection><collection>Solid State and Superconductivity Abstracts</collection><collection>Technology Research Database</collection><collection>ProQuest Computer Science Collection</collection><collection>Advanced Technologies Database with Aerospace</collection><collection>Computer and Information Systems Abstracts Academic</collection><collection>Computer and Information Systems Abstracts Professional</collection><jtitle>Journal of computational physics</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Moon, Hojun</au><au>Hong, Seungpyo</au><au>You, Donghyun</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Application of the parallel diagonal dominant algorithm for the incompressible Navier-Stokes equations</atitle><jtitle>Journal of computational physics</jtitle><date>2020-12-15</date><risdate>2020</risdate><volume>423</volume><spage>109795</spage><pages>109795-</pages><artnum>109795</artnum><issn>0021-9991</issn><eissn>1090-2716</eissn><abstract>•Proved the applicability of the PDD algorithm for the incompressible Navier-Stokes equations.•Proved errors from the PDD algorithm are bounded regardless of diagonal dominance of tridiagonal matrices.•Investigated effects of the CFL number and the number of grid points on the accuracy.•Developed a highly scalable ADI-PDD method by utilizing an aggregative data communication method.
The accuracy and the applicability of the parallel diagonal dominant (PDD) algorithm are explored for highly scalable computation of the incompressible Navier-Stokes equations which are integrated using a fully-implicit fractional-step method in parallel computational environments. The PDD algorithm is known to be applicable only for an evenly diagonal dominant matrix. In the present study, however, it is shown mathematically that the PDD algorithm is utilizable even for non-diagonal dominant matrices derived from discretization of incompressible momentum equations. The order of accuracy and the error characteristics are investigated in detail in terms of the Courant-Friedrichs-Lewy (CFL) number and the grid spacing by conducting simulations of decaying vortices in both two and three dimensions, flow in a lid-driven cavity, and flow over a circular cylinder. In order to reduce communication cost, which is one of bottlenecks in parallel computation, an aggregative data communication method is combined with the PDD algorithm. Parallel performance of the present PDD-based method is investigated by measuring the speedup, efficiency, overhead, and serial fraction.</abstract><cop>Cambridge</cop><pub>Elsevier Inc</pub><doi>10.1016/j.jcp.2020.109795</doi><orcidid>https://orcid.org/0000-0003-2470-5411</orcidid></addata></record> |
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subjects | Accuracy Algorithms Alternating-direction-implicit (ADI) method Circular cylinders Computational fluid dynamics Computational physics Data communication Error analysis Flow control Fluid flow Fully-implicit method Mathematical analysis Matrix methods Navier-Stokes equations Parallel diagonal dominant (PDD) algorithm Parallel processing Three dimensional flow Tridiagonal matrix |
title | Application of the parallel diagonal dominant algorithm for the incompressible Navier-Stokes equations |
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