X-Ray Structure, DFT Study of p-Chlorobenzoic Acid, and the Effect of In Silico Molecular Docking on Tankyrase I Enzyme
p -Chlorbenzoic acid carries a 4-chloro position atom where it may be important in coordinated with and control certain biological parameters , it can inhibit the action of specific enzyme in organisms. X‑ray data collection gives information about the analysis of the covalent and the non-covalent i...
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Veröffentlicht in: | Russian journal of bioorganic chemistry 2020-07, Vol.46 (4), p.542-550 |
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creator | El Sayed, Doaa S o, Sabine |
description | p
-Chlorbenzoic acid carries a 4-chloro position atom where it may be important in coordinated with and control certain biological parameters , it can inhibit the action of specific enzyme in organisms. X‑ray data collection gives information about the analysis of the covalent and the non-covalent interactions in 3D quantitatively. Recrystallization of
p
-chlorobenzoic acid was carried out to remove any impurities and to be prepared in pure crystal form. X-ray analytical technique studied the structure and geometrical parameters. The experimental data were compared with the calculated ones for the optimized structure obtained from density functional theory (DFT) studies. X-ray structure of
p
-chlorobenzoic acid is found in dimer form stabilized with intermolecular H-bond interaction. Infrared spectra and thermal analysis of this compound were studied. DFT calculations were carried out and structural geometrical parameters were evaluated. In-silico molecular docking of tested ligand in Tankyrase I enzyme shows a number of hydrogen bond interactions, chlorine and aromatic ring interaction and polar contact, these predicted interactions can inhibit the active sites of amino acids of Tankyrase I enzyme, so this inhibition can control some biological activities especially anticancer effect. |
doi_str_mv | 10.1134/S1068162020040184 |
format | Article |
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-Chlorbenzoic acid carries a 4-chloro position atom where it may be important in coordinated with and control certain biological parameters , it can inhibit the action of specific enzyme in organisms. X‑ray data collection gives information about the analysis of the covalent and the non-covalent interactions in 3D quantitatively. Recrystallization of
p
-chlorobenzoic acid was carried out to remove any impurities and to be prepared in pure crystal form. X-ray analytical technique studied the structure and geometrical parameters. The experimental data were compared with the calculated ones for the optimized structure obtained from density functional theory (DFT) studies. X-ray structure of
p
-chlorobenzoic acid is found in dimer form stabilized with intermolecular H-bond interaction. Infrared spectra and thermal analysis of this compound were studied. DFT calculations were carried out and structural geometrical parameters were evaluated. In-silico molecular docking of tested ligand in Tankyrase I enzyme shows a number of hydrogen bond interactions, chlorine and aromatic ring interaction and polar contact, these predicted interactions can inhibit the active sites of amino acids of Tankyrase I enzyme, so this inhibition can control some biological activities especially anticancer effect.</description><identifier>ISSN: 1068-1620</identifier><identifier>EISSN: 1608-330X</identifier><identifier>DOI: 10.1134/S1068162020040184</identifier><language>eng</language><publisher>Moscow: Pleiades Publishing</publisher><subject>Amino acids ; Anticancer properties ; Aromatic compounds ; Biochemistry ; Biomedical and Life Sciences ; Biomedicine ; Bioorganic Chemistry ; Chlorine ; Crystal structure ; Data collection ; Density functional theory ; Dimers ; Enzymes ; Hydrogen bonds ; Infrared analysis ; Infrared spectra ; Life Sciences ; Mathematical analysis ; Molecular docking ; Molecular structure ; Organic Chemistry ; Parameters ; Recrystallization ; Thermal analysis</subject><ispartof>Russian journal of bioorganic chemistry, 2020-07, Vol.46 (4), p.542-550</ispartof><rights>Pleiades Publishing, Ltd. 2020</rights><rights>Pleiades Publishing, Ltd. 2020.</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><cites>FETCH-LOGICAL-c1834-7f849a632dce6e6b5eaa08042e9ddd011f595f97fff562e234618ec00031adbf3</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://link.springer.com/content/pdf/10.1134/S1068162020040184$$EPDF$$P50$$Gspringer$$H</linktopdf><linktohtml>$$Uhttps://link.springer.com/10.1134/S1068162020040184$$EHTML$$P50$$Gspringer$$H</linktohtml><link.rule.ids>314,777,781,27905,27906,41469,42538,51300</link.rule.ids></links><search><creatorcontrib>El Sayed, Doaa S</creatorcontrib><creatorcontrib>o, Sabine</creatorcontrib><title>X-Ray Structure, DFT Study of p-Chlorobenzoic Acid, and the Effect of In Silico Molecular Docking on Tankyrase I Enzyme</title><title>Russian journal of bioorganic chemistry</title><addtitle>Russ J Bioorg Chem</addtitle><description>p
-Chlorbenzoic acid carries a 4-chloro position atom where it may be important in coordinated with and control certain biological parameters , it can inhibit the action of specific enzyme in organisms. X‑ray data collection gives information about the analysis of the covalent and the non-covalent interactions in 3D quantitatively. Recrystallization of
p
-chlorobenzoic acid was carried out to remove any impurities and to be prepared in pure crystal form. X-ray analytical technique studied the structure and geometrical parameters. The experimental data were compared with the calculated ones for the optimized structure obtained from density functional theory (DFT) studies. X-ray structure of
p
-chlorobenzoic acid is found in dimer form stabilized with intermolecular H-bond interaction. Infrared spectra and thermal analysis of this compound were studied. DFT calculations were carried out and structural geometrical parameters were evaluated. In-silico molecular docking of tested ligand in Tankyrase I enzyme shows a number of hydrogen bond interactions, chlorine and aromatic ring interaction and polar contact, these predicted interactions can inhibit the active sites of amino acids of Tankyrase I enzyme, so this inhibition can control some biological activities especially anticancer effect.</description><subject>Amino acids</subject><subject>Anticancer properties</subject><subject>Aromatic compounds</subject><subject>Biochemistry</subject><subject>Biomedical and Life Sciences</subject><subject>Biomedicine</subject><subject>Bioorganic Chemistry</subject><subject>Chlorine</subject><subject>Crystal structure</subject><subject>Data collection</subject><subject>Density functional theory</subject><subject>Dimers</subject><subject>Enzymes</subject><subject>Hydrogen bonds</subject><subject>Infrared analysis</subject><subject>Infrared spectra</subject><subject>Life Sciences</subject><subject>Mathematical analysis</subject><subject>Molecular docking</subject><subject>Molecular structure</subject><subject>Organic Chemistry</subject><subject>Parameters</subject><subject>Recrystallization</subject><subject>Thermal analysis</subject><issn>1068-1620</issn><issn>1608-330X</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2020</creationdate><recordtype>article</recordtype><recordid>eNp1kE9Lw0AQxYMoWKsfwNuC10Zns5ttciz9o4WKYCv0Frab2TZtult3EyT99KZU8CCeZob3e2_gBcE9hUdKGX-aUxAJFRFEABxowi-CDhWQhIzB8rLdWzk86dfBjfdbAAoQJ53gaxm-y4bMK1erqnbYI6PJoj3rvCFWk0M43JTW2RWaoy0UGagi7xFpclJtkIy1RlWduKkh86IslCWvtkRVl9KRkVW7wqyJNWQhza5x0iOZkrE5Nnu8Da60LD3e_cxu8DEZL4Yv4ezteToczEJFE8bDvk54KgWLcoUCxSpGKSEBHmGa5zlQquM01mlfax2LCCPGBU1QAQCjMl9p1g0ezrkHZz9r9FW2tbUz7css4jEwSKHPW4qeKeWs9w51dnDFXromo5Cd-s3-9Nt6orPHt6xZo_tN_t_0DfDfeuE</recordid><startdate>20200701</startdate><enddate>20200701</enddate><creator>El Sayed, Doaa S</creator><creator>o, Sabine</creator><general>Pleiades Publishing</general><general>Springer Nature B.V</general><scope>AAYXX</scope><scope>CITATION</scope></search><sort><creationdate>20200701</creationdate><title>X-Ray Structure, DFT Study of p-Chlorobenzoic Acid, and the Effect of In Silico Molecular Docking on Tankyrase I Enzyme</title><author>El Sayed, Doaa S ; o, Sabine</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c1834-7f849a632dce6e6b5eaa08042e9ddd011f595f97fff562e234618ec00031adbf3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2020</creationdate><topic>Amino acids</topic><topic>Anticancer properties</topic><topic>Aromatic compounds</topic><topic>Biochemistry</topic><topic>Biomedical and Life Sciences</topic><topic>Biomedicine</topic><topic>Bioorganic Chemistry</topic><topic>Chlorine</topic><topic>Crystal structure</topic><topic>Data collection</topic><topic>Density functional theory</topic><topic>Dimers</topic><topic>Enzymes</topic><topic>Hydrogen bonds</topic><topic>Infrared analysis</topic><topic>Infrared spectra</topic><topic>Life Sciences</topic><topic>Mathematical analysis</topic><topic>Molecular docking</topic><topic>Molecular structure</topic><topic>Organic Chemistry</topic><topic>Parameters</topic><topic>Recrystallization</topic><topic>Thermal analysis</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>El Sayed, Doaa S</creatorcontrib><creatorcontrib>o, Sabine</creatorcontrib><collection>CrossRef</collection><jtitle>Russian journal of bioorganic chemistry</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>El Sayed, Doaa S</au><au>o, Sabine</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>X-Ray Structure, DFT Study of p-Chlorobenzoic Acid, and the Effect of In Silico Molecular Docking on Tankyrase I Enzyme</atitle><jtitle>Russian journal of bioorganic chemistry</jtitle><stitle>Russ J Bioorg Chem</stitle><date>2020-07-01</date><risdate>2020</risdate><volume>46</volume><issue>4</issue><spage>542</spage><epage>550</epage><pages>542-550</pages><issn>1068-1620</issn><eissn>1608-330X</eissn><abstract>p
-Chlorbenzoic acid carries a 4-chloro position atom where it may be important in coordinated with and control certain biological parameters , it can inhibit the action of specific enzyme in organisms. X‑ray data collection gives information about the analysis of the covalent and the non-covalent interactions in 3D quantitatively. Recrystallization of
p
-chlorobenzoic acid was carried out to remove any impurities and to be prepared in pure crystal form. X-ray analytical technique studied the structure and geometrical parameters. The experimental data were compared with the calculated ones for the optimized structure obtained from density functional theory (DFT) studies. X-ray structure of
p
-chlorobenzoic acid is found in dimer form stabilized with intermolecular H-bond interaction. Infrared spectra and thermal analysis of this compound were studied. DFT calculations were carried out and structural geometrical parameters were evaluated. In-silico molecular docking of tested ligand in Tankyrase I enzyme shows a number of hydrogen bond interactions, chlorine and aromatic ring interaction and polar contact, these predicted interactions can inhibit the active sites of amino acids of Tankyrase I enzyme, so this inhibition can control some biological activities especially anticancer effect.</abstract><cop>Moscow</cop><pub>Pleiades Publishing</pub><doi>10.1134/S1068162020040184</doi><tpages>9</tpages></addata></record> |
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subjects | Amino acids Anticancer properties Aromatic compounds Biochemistry Biomedical and Life Sciences Biomedicine Bioorganic Chemistry Chlorine Crystal structure Data collection Density functional theory Dimers Enzymes Hydrogen bonds Infrared analysis Infrared spectra Life Sciences Mathematical analysis Molecular docking Molecular structure Organic Chemistry Parameters Recrystallization Thermal analysis |
title | X-Ray Structure, DFT Study of p-Chlorobenzoic Acid, and the Effect of In Silico Molecular Docking on Tankyrase I Enzyme |
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