A Fortran-Keras Deep Learning Bridge for Scientific Computing
Implementing artificial neural networks is commonly achieved via high-level programming languages such as Python and easy-to-use deep learning libraries such as Keras. These software libraries come preloaded with a variety of network architectures, provide autodifferentiation, and support GPUs for f...
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creator | Curcic, Milan Linstead, Erik Best, Natalie Pritchard, Mike Ott, Jordan Baldi, Pierre |
description | Implementing artificial neural networks is commonly achieved via high-level programming languages such as Python and easy-to-use deep learning libraries such as Keras. These software libraries come preloaded with a variety of network architectures, provide autodifferentiation, and support GPUs for fast and efficient computation. As a result, a deep learning practitioner will favor training a neural network model in Python, where these tools are readily available. However, many large-scale scientific computation projects are written in Fortran, making it difficult to integrate with modern deep learning methods. To alleviate this problem, we introduce a software library, the Fortran-Keras Bridge (FKB). This two-way bridge connects environments where deep learning resources are plentiful with those where they are scarce. The paper describes several unique features offered by FKB, such as customizable layers, loss functions, and network ensembles. The paper concludes with a case study that applies FKB to address open questions about the robustness of an experimental approach to global climate simulation, in which subgrid physics are outsourced to deep neural network emulators. In this context, FKB enables a hyperparameter search of one hundred plus candidate models of subgrid cloud and radiation physics, initially implemented in Keras, to be transferred and used in Fortran. Such a process allows the model’s emergent behavior to be assessed, i.e., when fit imperfections are coupled to explicit planetary-scale fluid dynamics. The results reveal a previously unrecognized strong relationship between offline validation error and online performance, in which the choice of the optimizer proves unexpectedly critical. This in turn reveals many new neural network architectures that produce considerable improvements in climate model stability including some with reduced error, for an especially challenging training dataset. |
doi_str_mv | 10.1155/2020/8888811 |
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These software libraries come preloaded with a variety of network architectures, provide autodifferentiation, and support GPUs for fast and efficient computation. As a result, a deep learning practitioner will favor training a neural network model in Python, where these tools are readily available. However, many large-scale scientific computation projects are written in Fortran, making it difficult to integrate with modern deep learning methods. To alleviate this problem, we introduce a software library, the Fortran-Keras Bridge (FKB). This two-way bridge connects environments where deep learning resources are plentiful with those where they are scarce. The paper describes several unique features offered by FKB, such as customizable layers, loss functions, and network ensembles. The paper concludes with a case study that applies FKB to address open questions about the robustness of an experimental approach to global climate simulation, in which subgrid physics are outsourced to deep neural network emulators. In this context, FKB enables a hyperparameter search of one hundred plus candidate models of subgrid cloud and radiation physics, initially implemented in Keras, to be transferred and used in Fortran. Such a process allows the model’s emergent behavior to be assessed, i.e., when fit imperfections are coupled to explicit planetary-scale fluid dynamics. The results reveal a previously unrecognized strong relationship between offline validation error and online performance, in which the choice of the optimizer proves unexpectedly critical. This in turn reveals many new neural network architectures that produce considerable improvements in climate model stability including some with reduced error, for an especially challenging training dataset.</description><identifier>ISSN: 1058-9244</identifier><identifier>EISSN: 1875-919X</identifier><identifier>DOI: 10.1155/2020/8888811</identifier><language>eng</language><publisher>Cairo, Egypt: Hindawi Publishing Corporation</publisher><subject>Application programming interface ; Artificial neural networks ; Chemistry ; Climate models ; Computational fluid dynamics ; Computer architecture ; Computer simulation ; Deep learning ; Dosimetry ; Earthquakes ; Emulators ; Error reduction ; Fluid dynamics ; FORTRAN ; High level languages ; Laboratories ; Libraries ; Machine learning ; Mechanics ; Molecular physics ; Neural networks ; Partial differential equations ; Physics ; Popularity ; Programming languages ; Simulation ; Software ; Training ; Weather forecasting</subject><ispartof>Scientific programming, 2020, Vol.2020 (2020), p.1-13</ispartof><rights>Copyright © 2020 Jordan Ott et al.</rights><rights>Copyright © 2020 Jordan Ott et al. This is an open access article distributed under the Creative Commons Attribution License (the “License”), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License. http://creativecommons.org/licenses/by/4.0</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c426t-17c2e1461ae7c133e4bdc0830846335348f8e522d576bbe51da8e7bb8d81263d3</citedby><cites>FETCH-LOGICAL-c426t-17c2e1461ae7c133e4bdc0830846335348f8e522d576bbe51da8e7bb8d81263d3</cites><orcidid>0000-0001-8752-4664</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,776,780,4010,27900,27901,27902</link.rule.ids></links><search><contributor>Acacio Sanchez, Manuel E.</contributor><creatorcontrib>Curcic, Milan</creatorcontrib><creatorcontrib>Linstead, Erik</creatorcontrib><creatorcontrib>Best, Natalie</creatorcontrib><creatorcontrib>Pritchard, Mike</creatorcontrib><creatorcontrib>Ott, Jordan</creatorcontrib><creatorcontrib>Baldi, Pierre</creatorcontrib><title>A Fortran-Keras Deep Learning Bridge for Scientific Computing</title><title>Scientific programming</title><description>Implementing artificial neural networks is commonly achieved via high-level programming languages such as Python and easy-to-use deep learning libraries such as Keras. 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The paper concludes with a case study that applies FKB to address open questions about the robustness of an experimental approach to global climate simulation, in which subgrid physics are outsourced to deep neural network emulators. In this context, FKB enables a hyperparameter search of one hundred plus candidate models of subgrid cloud and radiation physics, initially implemented in Keras, to be transferred and used in Fortran. Such a process allows the model’s emergent behavior to be assessed, i.e., when fit imperfections are coupled to explicit planetary-scale fluid dynamics. The results reveal a previously unrecognized strong relationship between offline validation error and online performance, in which the choice of the optimizer proves unexpectedly critical. 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The paper concludes with a case study that applies FKB to address open questions about the robustness of an experimental approach to global climate simulation, in which subgrid physics are outsourced to deep neural network emulators. In this context, FKB enables a hyperparameter search of one hundred plus candidate models of subgrid cloud and radiation physics, initially implemented in Keras, to be transferred and used in Fortran. Such a process allows the model’s emergent behavior to be assessed, i.e., when fit imperfections are coupled to explicit planetary-scale fluid dynamics. The results reveal a previously unrecognized strong relationship between offline validation error and online performance, in which the choice of the optimizer proves unexpectedly critical. 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subjects | Application programming interface Artificial neural networks Chemistry Climate models Computational fluid dynamics Computer architecture Computer simulation Deep learning Dosimetry Earthquakes Emulators Error reduction Fluid dynamics FORTRAN High level languages Laboratories Libraries Machine learning Mechanics Molecular physics Neural networks Partial differential equations Physics Popularity Programming languages Simulation Software Training Weather forecasting |
title | A Fortran-Keras Deep Learning Bridge for Scientific Computing |
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