Rickettsia africae an Agent of African Tick Bite Fever in Ticks Collected from Domestic Animals in Eastern Cape, South Africa
Background:Ticks transmit a plethora of pathogens of zoonotic implications. Their distribution, diversity and the pathogens they transmit differ from one ecological location to another.Rickettsia africaeis the agent of African tick bite fever found in South Africa, a zoonotic infection that is frequ...
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description | Background:Ticks transmit a plethora of pathogens of zoonotic implications. Their distribution, diversity and the pathogens they transmit differ from one ecological location to another.Rickettsia africaeis the agent of African tick bite fever found in South Africa, a zoonotic infection that is frequently reported among travelers who have visited many sub-Saharan African countries where the pathogen is prevalent.Methods:Ticks were collected from domestic animals in Raymond Nkandla Municipality, Eastern Cape, South Africa. The ticks were identified morphologically prior to DNA extraction followed by molecular identification of randomly selected ticks from the morphologically delineated groups. To assess for the presence of tick-borne pathogens belonging toRickettsiaspp. by PCR (polymerase chain reaction), we used specific primer pairs targeting thegltA,ompA andompB genes. The selected amplified ticks, all positiveompB and forty threeompA amplicons were sequenced in a commercial sequencing facility. The obtained nucleotide sequences were edited and subjected to BLASTn for homology search and phylogenetic analyses were performed with MEGA 7 Version for genetic relationships with curated reference sequences in GenBank.Results:A total of 953 ticks collected in the study were delineated into three genera consisting ofAmblyomma,RhipicephalusandHyalommain decreasing order of abundance. The presence of rickettsial DNA was detected in 60/953 (6.3%) from the three genera of ticks screened. Genetic analyses of the DNA sequences obtained showed that they have phylogenetic relationship to members of the spotted fever group rickettsiae withR. africae, being the predominant SFGR (spotted fever group rickettsiae) detected in the screened ticks.Conclusion:This report shows thatR. africaeis the predominant spotted fever group rickettsiae in ticks collected from domestic animals in the study area and the human health impacts are not known. |
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Their distribution, diversity and the pathogens they transmit differ from one ecological location to another.Rickettsia africaeis the agent of African tick bite fever found in South Africa, a zoonotic infection that is frequently reported among travelers who have visited many sub-Saharan African countries where the pathogen is prevalent.Methods:Ticks were collected from domestic animals in Raymond Nkandla Municipality, Eastern Cape, South Africa. The ticks were identified morphologically prior to DNA extraction followed by molecular identification of randomly selected ticks from the morphologically delineated groups. To assess for the presence of tick-borne pathogens belonging toRickettsiaspp. by PCR (polymerase chain reaction), we used specific primer pairs targeting thegltA,ompA andompB genes. The selected amplified ticks, all positiveompB and forty threeompA amplicons were sequenced in a commercial sequencing facility. The obtained nucleotide sequences were edited and subjected to BLASTn for homology search and phylogenetic analyses were performed with MEGA 7 Version for genetic relationships with curated reference sequences in GenBank.Results:A total of 953 ticks collected in the study were delineated into three genera consisting ofAmblyomma,RhipicephalusandHyalommain decreasing order of abundance. The presence of rickettsial DNA was detected in 60/953 (6.3%) from the three genera of ticks screened. Genetic analyses of the DNA sequences obtained showed that they have phylogenetic relationship to members of the spotted fever group rickettsiae withR. africae, being the predominant SFGR (spotted fever group rickettsiae) detected in the screened ticks.Conclusion:This report shows thatR. africaeis the predominant spotted fever group rickettsiae in ticks collected from domestic animals in the study area and the human health impacts are not known.</description><identifier>ISSN: 2076-0817</identifier><identifier>EISSN: 2076-0817</identifier><identifier>DOI: 10.3390/pathogens9080631</identifier><identifier>PMID: 32748891</identifier><language>eng</language><publisher>BASEL: Mdpi</publisher><subject>African tick bite fever ; Animals ; Arachnids ; Deoxyribonucleic acid ; DNA ; Domestic animals ; Ethics ; Fever ; Gene sequencing ; Genetic analysis ; Genetic relationship ; Homology ; Infections ; Insect bites ; Life Sciences & Biomedicine ; Microbiology ; Morphology ; Nucleotide sequence ; Nucleotides ; Pathogens ; Phylogenetics ; Phylogeny ; Polymerase chain reaction ; R. africae ; Rickettsia africae ; Rural areas ; Science & Technology ; South Africa ; spotted fever group rickettsiae ; Studies ; Ticks ; Zoonoses</subject><ispartof>Pathogens (Basel), 2020-08, Vol.9 (8), p.631, Article 631</ispartof><rights>2020. This work is licensed under http://creativecommons.org/licenses/by/3.0/ (the “License”). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License.</rights><rights>2020 by the authors. 2020</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>true</woscitedreferencessubscribed><woscitedreferencescount>11</woscitedreferencescount><woscitedreferencesoriginalsourcerecordid>wos000567046800001</woscitedreferencesoriginalsourcerecordid><citedby>FETCH-LOGICAL-c467t-9897e0b54a28304879957721009bcb1c9f5b374a24f00aa0f5413873fc55a2e13</citedby><cites>FETCH-LOGICAL-c467t-9897e0b54a28304879957721009bcb1c9f5b374a24f00aa0f5413873fc55a2e13</cites><orcidid>0000-0002-5269-1849 ; 0000-0002-9734-7400</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC7459594/pdf/$$EPDF$$P50$$Gpubmedcentral$$Hfree_for_read</linktopdf><linktohtml>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC7459594/$$EHTML$$P50$$Gpubmedcentral$$Hfree_for_read</linktohtml><link.rule.ids>230,314,724,777,781,861,882,2096,2108,27905,27906,53772,53774</link.rule.ids></links><search><creatorcontrib>Iweriebor, Benson Chuks</creatorcontrib><creatorcontrib>Nqoro, Ayabulela</creatorcontrib><creatorcontrib>Obi, Chikwelu Larry</creatorcontrib><title>Rickettsia africae an Agent of African Tick Bite Fever in Ticks Collected from Domestic Animals in Eastern Cape, South Africa</title><title>Pathogens (Basel)</title><addtitle>PATHOGENS</addtitle><description>Background:Ticks transmit a plethora of pathogens of zoonotic implications. Their distribution, diversity and the pathogens they transmit differ from one ecological location to another.Rickettsia africaeis the agent of African tick bite fever found in South Africa, a zoonotic infection that is frequently reported among travelers who have visited many sub-Saharan African countries where the pathogen is prevalent.Methods:Ticks were collected from domestic animals in Raymond Nkandla Municipality, Eastern Cape, South Africa. The ticks were identified morphologically prior to DNA extraction followed by molecular identification of randomly selected ticks from the morphologically delineated groups. To assess for the presence of tick-borne pathogens belonging toRickettsiaspp. by PCR (polymerase chain reaction), we used specific primer pairs targeting thegltA,ompA andompB genes. The selected amplified ticks, all positiveompB and forty threeompA amplicons were sequenced in a commercial sequencing facility. The obtained nucleotide sequences were edited and subjected to BLASTn for homology search and phylogenetic analyses were performed with MEGA 7 Version for genetic relationships with curated reference sequences in GenBank.Results:A total of 953 ticks collected in the study were delineated into three genera consisting ofAmblyomma,RhipicephalusandHyalommain decreasing order of abundance. The presence of rickettsial DNA was detected in 60/953 (6.3%) from the three genera of ticks screened. Genetic analyses of the DNA sequences obtained showed that they have phylogenetic relationship to members of the spotted fever group rickettsiae withR. africae, being the predominant SFGR (spotted fever group rickettsiae) detected in the screened ticks.Conclusion:This report shows thatR. africaeis the predominant spotted fever group rickettsiae in ticks collected from domestic animals in the study area and the human health impacts are not known.</description><subject>African tick bite fever</subject><subject>Animals</subject><subject>Arachnids</subject><subject>Deoxyribonucleic acid</subject><subject>DNA</subject><subject>Domestic animals</subject><subject>Ethics</subject><subject>Fever</subject><subject>Gene sequencing</subject><subject>Genetic analysis</subject><subject>Genetic relationship</subject><subject>Homology</subject><subject>Infections</subject><subject>Insect bites</subject><subject>Life Sciences & Biomedicine</subject><subject>Microbiology</subject><subject>Morphology</subject><subject>Nucleotide sequence</subject><subject>Nucleotides</subject><subject>Pathogens</subject><subject>Phylogenetics</subject><subject>Phylogeny</subject><subject>Polymerase chain reaction</subject><subject>R. africae</subject><subject>Rickettsia africae</subject><subject>Rural areas</subject><subject>Science & Technology</subject><subject>South Africa</subject><subject>spotted fever group rickettsiae</subject><subject>Studies</subject><subject>Ticks</subject><subject>Zoonoses</subject><issn>2076-0817</issn><issn>2076-0817</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2020</creationdate><recordtype>article</recordtype><sourceid>AOWDO</sourceid><sourceid>ABUWG</sourceid><sourceid>AFKRA</sourceid><sourceid>AZQEC</sourceid><sourceid>BENPR</sourceid><sourceid>CCPQU</sourceid><sourceid>DWQXO</sourceid><sourceid>GNUQQ</sourceid><sourceid>DOA</sourceid><recordid>eNqNksFvFCEUxidGY5vau0cSLya6CgMzwMVkO7bapImJ1jNhmMcu6yyswNR46P9eprtpbE9yAR7f98vj5auq1wR_oFTijzud12EFPkkscEvJs-q4xrxdYEH483_OR9VpShtclsDz_WV1RGvOhJDkuLr97swvyDk5jbSNzmhA2qNl4WYULFre1zy6LjJ05jKgC7iBiNy-lFAXxhFMhgHZGLboc9hCys6gpXdbPaZZeK5ThuhRp3fwHv0IU14fuK-qF7aI4PSwn1Q_L86vu6-Lq29fLrvl1cKwlueFFJID7huma0ExE1zKhvOaYCx70xMjbdNTXl6ZxVhrbBtGqODUmqbRNRB6Ul3uuUPQG7WLpbX4VwXt1H0hxJXSsXQ9gjK9HejAeWM4Z8CEBAFABmJ1C5ZxXFif9qzd1G9hMGVQUY-PoI9fvFurVbhRnDWykawA3h4AMfyeyrTU1iUD46g9hCmpmlFMeV0LWaRvnkg3YYq-jGpWlf8TJtqiwnuViSGlCPahGYLVHBX1NCrFIvaWP9AHm4wDb-DBVqLStByzVsypIZ3LOrvguzD5XKzv_t9K7wBQNtII</recordid><startdate>20200802</startdate><enddate>20200802</enddate><creator>Iweriebor, Benson Chuks</creator><creator>Nqoro, Ayabulela</creator><creator>Obi, Chikwelu Larry</creator><general>Mdpi</general><general>MDPI AG</general><general>MDPI</general><scope>AOWDO</scope><scope>BLEPL</scope><scope>DTL</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7T7</scope><scope>8FD</scope><scope>8FE</scope><scope>8FH</scope><scope>ABUWG</scope><scope>AFKRA</scope><scope>AZQEC</scope><scope>BBNVY</scope><scope>BENPR</scope><scope>BHPHI</scope><scope>C1K</scope><scope>CCPQU</scope><scope>DWQXO</scope><scope>FR3</scope><scope>GNUQQ</scope><scope>HCIFZ</scope><scope>LK8</scope><scope>M7P</scope><scope>P64</scope><scope>PIMPY</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>7X8</scope><scope>5PM</scope><scope>DOA</scope><orcidid>https://orcid.org/0000-0002-5269-1849</orcidid><orcidid>https://orcid.org/0000-0002-9734-7400</orcidid></search><sort><creationdate>20200802</creationdate><title>Rickettsia africae an Agent of African Tick Bite Fever in Ticks Collected from Domestic Animals in Eastern Cape, South Africa</title><author>Iweriebor, Benson Chuks ; Nqoro, Ayabulela ; Obi, Chikwelu Larry</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c467t-9897e0b54a28304879957721009bcb1c9f5b374a24f00aa0f5413873fc55a2e13</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2020</creationdate><topic>African tick bite fever</topic><topic>Animals</topic><topic>Arachnids</topic><topic>Deoxyribonucleic acid</topic><topic>DNA</topic><topic>Domestic animals</topic><topic>Ethics</topic><topic>Fever</topic><topic>Gene sequencing</topic><topic>Genetic analysis</topic><topic>Genetic relationship</topic><topic>Homology</topic><topic>Infections</topic><topic>Insect bites</topic><topic>Life Sciences & Biomedicine</topic><topic>Microbiology</topic><topic>Morphology</topic><topic>Nucleotide sequence</topic><topic>Nucleotides</topic><topic>Pathogens</topic><topic>Phylogenetics</topic><topic>Phylogeny</topic><topic>Polymerase chain reaction</topic><topic>R. africae</topic><topic>Rickettsia africae</topic><topic>Rural areas</topic><topic>Science & Technology</topic><topic>South Africa</topic><topic>spotted fever group rickettsiae</topic><topic>Studies</topic><topic>Ticks</topic><topic>Zoonoses</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Iweriebor, Benson Chuks</creatorcontrib><creatorcontrib>Nqoro, Ayabulela</creatorcontrib><creatorcontrib>Obi, Chikwelu Larry</creatorcontrib><collection>Web of Science - Science Citation Index Expanded - 2020</collection><collection>Web of Science Core Collection</collection><collection>Science Citation Index Expanded</collection><collection>CrossRef</collection><collection>Industrial and Applied Microbiology Abstracts (Microbiology A)</collection><collection>Technology Research Database</collection><collection>ProQuest SciTech Collection</collection><collection>ProQuest Natural Science Collection</collection><collection>ProQuest Central (Alumni Edition)</collection><collection>ProQuest Central UK/Ireland</collection><collection>ProQuest Central Essentials</collection><collection>Biological Science Collection</collection><collection>ProQuest Central</collection><collection>Natural Science Collection</collection><collection>Environmental Sciences and Pollution Management</collection><collection>ProQuest One Community College</collection><collection>ProQuest Central Korea</collection><collection>Engineering Research Database</collection><collection>ProQuest Central Student</collection><collection>SciTech Premium Collection</collection><collection>ProQuest Biological Science Collection</collection><collection>Biological Science Database</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>Publicly Available Content Database</collection><collection>ProQuest One Academic Eastern Edition (DO NOT USE)</collection><collection>ProQuest One Academic</collection><collection>ProQuest One Academic UKI Edition</collection><collection>MEDLINE - Academic</collection><collection>PubMed Central (Full Participant titles)</collection><collection>DOAJ Directory of Open Access Journals</collection><jtitle>Pathogens (Basel)</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Iweriebor, Benson Chuks</au><au>Nqoro, Ayabulela</au><au>Obi, Chikwelu Larry</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Rickettsia africae an Agent of African Tick Bite Fever in Ticks Collected from Domestic Animals in Eastern Cape, South Africa</atitle><jtitle>Pathogens (Basel)</jtitle><stitle>PATHOGENS</stitle><date>2020-08-02</date><risdate>2020</risdate><volume>9</volume><issue>8</issue><spage>631</spage><pages>631-</pages><artnum>631</artnum><issn>2076-0817</issn><eissn>2076-0817</eissn><abstract>Background:Ticks transmit a plethora of pathogens of zoonotic implications. Their distribution, diversity and the pathogens they transmit differ from one ecological location to another.Rickettsia africaeis the agent of African tick bite fever found in South Africa, a zoonotic infection that is frequently reported among travelers who have visited many sub-Saharan African countries where the pathogen is prevalent.Methods:Ticks were collected from domestic animals in Raymond Nkandla Municipality, Eastern Cape, South Africa. The ticks were identified morphologically prior to DNA extraction followed by molecular identification of randomly selected ticks from the morphologically delineated groups. To assess for the presence of tick-borne pathogens belonging toRickettsiaspp. by PCR (polymerase chain reaction), we used specific primer pairs targeting thegltA,ompA andompB genes. The selected amplified ticks, all positiveompB and forty threeompA amplicons were sequenced in a commercial sequencing facility. The obtained nucleotide sequences were edited and subjected to BLASTn for homology search and phylogenetic analyses were performed with MEGA 7 Version for genetic relationships with curated reference sequences in GenBank.Results:A total of 953 ticks collected in the study were delineated into three genera consisting ofAmblyomma,RhipicephalusandHyalommain decreasing order of abundance. The presence of rickettsial DNA was detected in 60/953 (6.3%) from the three genera of ticks screened. Genetic analyses of the DNA sequences obtained showed that they have phylogenetic relationship to members of the spotted fever group rickettsiae withR. africae, being the predominant SFGR (spotted fever group rickettsiae) detected in the screened ticks.Conclusion:This report shows thatR. africaeis the predominant spotted fever group rickettsiae in ticks collected from domestic animals in the study area and the human health impacts are not known.</abstract><cop>BASEL</cop><pub>Mdpi</pub><pmid>32748891</pmid><doi>10.3390/pathogens9080631</doi><tpages>16</tpages><orcidid>https://orcid.org/0000-0002-5269-1849</orcidid><orcidid>https://orcid.org/0000-0002-9734-7400</orcidid><oa>free_for_read</oa></addata></record> |
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subjects | African tick bite fever Animals Arachnids Deoxyribonucleic acid DNA Domestic animals Ethics Fever Gene sequencing Genetic analysis Genetic relationship Homology Infections Insect bites Life Sciences & Biomedicine Microbiology Morphology Nucleotide sequence Nucleotides Pathogens Phylogenetics Phylogeny Polymerase chain reaction R. africae Rickettsia africae Rural areas Science & Technology South Africa spotted fever group rickettsiae Studies Ticks Zoonoses |
title | Rickettsia africae an Agent of African Tick Bite Fever in Ticks Collected from Domestic Animals in Eastern Cape, South Africa |
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