The complete mitochondrial genome of the monophagous moth Protegira songi (Lepidoptera: Noctuidae)
Protegira songi is a monophagous moth feeding on the Chinese protected tree of Eucommia ulmoides and has become a main defoliator of this rare tree. We determined the complete mitochondrial genome of the P. songi . The genome is 15,410 bp long with an A+T content of 79.6%. There are 37 typical anima...
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| Veröffentlicht in: | Conservation genetics resources 2017-06, Vol.9 (2), p.277-279 |
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| creator | Xiao-Hui, Guo Ming-Yang, Cheng Ya-Feng, Hou Tuan-Tuan, Deng Sha, Zhao Hai-Li, Yu Lian-Xi, Xing |
| description | Protegira songi
is a monophagous moth feeding on the Chinese protected tree of
Eucommia ulmoides
and has become a main defoliator of this rare tree. We determined the complete mitochondrial genome of the
P. songi
. The genome is 15,410 bp long with an A+T content of 79.6%. There are 37 typical animal mitochondrial genes, 13 protein-
coding
genes (PCGs), 22 tRNA and 2 rRNA genes and A+T-rich region. The tRNA gene
trnM
is rearranged to the upstream of the
trnl-trnQ-trnM
cluster compared with the putative ancestral arrangement of insects. The A+T-region is located between
rrnS
and
trnM
with a length of 340 bp and A+T content of 93.24%. Addition to the A+T-rich region, non-coding sequences of the mtDNA genome harbored 15 intergenic spacers. Phylogenetic tree based on the 10 complete mitochondrial genome sequences of closely related moth species accords well with the morphological phylogenetic analysis. |
| doi_str_mv | 10.1007/s12686-016-0672-2 |
| format | Article |
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is a monophagous moth feeding on the Chinese protected tree of
Eucommia ulmoides
and has become a main defoliator of this rare tree. We determined the complete mitochondrial genome of the
P. songi
. The genome is 15,410 bp long with an A+T content of 79.6%. There are 37 typical animal mitochondrial genes, 13 protein-
coding
genes (PCGs), 22 tRNA and 2 rRNA genes and A+T-rich region. The tRNA gene
trnM
is rearranged to the upstream of the
trnl-trnQ-trnM
cluster compared with the putative ancestral arrangement of insects. The A+T-region is located between
rrnS
and
trnM
with a length of 340 bp and A+T content of 93.24%. Addition to the A+T-rich region, non-coding sequences of the mtDNA genome harbored 15 intergenic spacers. Phylogenetic tree based on the 10 complete mitochondrial genome sequences of closely related moth species accords well with the morphological phylogenetic analysis.</description><identifier>ISSN: 1877-7252</identifier><identifier>EISSN: 1877-7260</identifier><identifier>DOI: 10.1007/s12686-016-0672-2</identifier><language>eng</language><publisher>Dordrecht: Springer Netherlands</publisher><subject>Animal Genetics and Genomics ; Biodiversity ; Biomedical and Life Sciences ; Conservation Biology/Ecology ; Ecology ; Evolutionary Biology ; Genomes ; Life Sciences ; Mitochondria ; Mitochondrial DNA ; Phylogenetics ; Phylogeny ; Plant Genetics and Genomics ; rRNA ; Technical Note ; tRNA</subject><ispartof>Conservation genetics resources, 2017-06, Vol.9 (2), p.277-279</ispartof><rights>Springer Science+Business Media Dordrecht 2017</rights><rights>Springer Science+Business Media Dordrecht 2017.</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c316t-25509a7f66a86dd9f5672bbf13d8c5eb6a0bc79491895c7bc6f70b9aec71428d3</citedby><cites>FETCH-LOGICAL-c316t-25509a7f66a86dd9f5672bbf13d8c5eb6a0bc79491895c7bc6f70b9aec71428d3</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://link.springer.com/content/pdf/10.1007/s12686-016-0672-2$$EPDF$$P50$$Gspringer$$H</linktopdf><linktohtml>$$Uhttps://link.springer.com/10.1007/s12686-016-0672-2$$EHTML$$P50$$Gspringer$$H</linktohtml><link.rule.ids>314,777,781,27905,27906,41469,42538,51300</link.rule.ids></links><search><creatorcontrib>Xiao-Hui, Guo</creatorcontrib><creatorcontrib>Ming-Yang, Cheng</creatorcontrib><creatorcontrib>Ya-Feng, Hou</creatorcontrib><creatorcontrib>Tuan-Tuan, Deng</creatorcontrib><creatorcontrib>Sha, Zhao</creatorcontrib><creatorcontrib>Hai-Li, Yu</creatorcontrib><creatorcontrib>Lian-Xi, Xing</creatorcontrib><title>The complete mitochondrial genome of the monophagous moth Protegira songi (Lepidoptera: Noctuidae)</title><title>Conservation genetics resources</title><addtitle>Conservation Genet Resour</addtitle><description>Protegira songi
is a monophagous moth feeding on the Chinese protected tree of
Eucommia ulmoides
and has become a main defoliator of this rare tree. We determined the complete mitochondrial genome of the
P. songi
. The genome is 15,410 bp long with an A+T content of 79.6%. There are 37 typical animal mitochondrial genes, 13 protein-
coding
genes (PCGs), 22 tRNA and 2 rRNA genes and A+T-rich region. The tRNA gene
trnM
is rearranged to the upstream of the
trnl-trnQ-trnM
cluster compared with the putative ancestral arrangement of insects. The A+T-region is located between
rrnS
and
trnM
with a length of 340 bp and A+T content of 93.24%. Addition to the A+T-rich region, non-coding sequences of the mtDNA genome harbored 15 intergenic spacers. Phylogenetic tree based on the 10 complete mitochondrial genome sequences of closely related moth species accords well with the morphological phylogenetic analysis.</description><subject>Animal Genetics and Genomics</subject><subject>Biodiversity</subject><subject>Biomedical and Life Sciences</subject><subject>Conservation Biology/Ecology</subject><subject>Ecology</subject><subject>Evolutionary Biology</subject><subject>Genomes</subject><subject>Life Sciences</subject><subject>Mitochondria</subject><subject>Mitochondrial DNA</subject><subject>Phylogenetics</subject><subject>Phylogeny</subject><subject>Plant Genetics and Genomics</subject><subject>rRNA</subject><subject>Technical Note</subject><subject>tRNA</subject><issn>1877-7252</issn><issn>1877-7260</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2017</creationdate><recordtype>article</recordtype><sourceid>AFKRA</sourceid><sourceid>AZQEC</sourceid><sourceid>BENPR</sourceid><sourceid>CCPQU</sourceid><sourceid>DWQXO</sourceid><sourceid>GNUQQ</sourceid><recordid>eNp1kDtPxDAQhC0EEsfBD6CzRANFwHYSO6ZDp-MhnYDiqC3HcR6nSzbYTsG_x6cgqChWO8U3s9pB6JKSW0qIuPOU8YInhMbhgiXsCC1oIUQiGCfHvzpnp-jM-x0hvEgZW6By21psoB_3NljcdwFMC0PlOr3HjR2gtxhqHCLUwwBjqxuYfNShxe8Ogm06p7GHoenw9caOXQVjsE7f41cwYeoqbW_O0Umt995e_Owl-nhcb1fPyebt6WX1sElMSnlIWJ4TqUXNuS54Vck6j3-UZU3TqjC5LbkmpREyk7SQuRGl4bUgpdTWCJqxokqX6GrOHR18TtYHtYPJDfGkYhnhUuSZzCJFZ8o48N7ZWo2u67X7UpSoQ5VqrlLFKtWhSsWih80eH9mhse4v-X_TNwObd4M</recordid><startdate>20170601</startdate><enddate>20170601</enddate><creator>Xiao-Hui, Guo</creator><creator>Ming-Yang, Cheng</creator><creator>Ya-Feng, Hou</creator><creator>Tuan-Tuan, Deng</creator><creator>Sha, Zhao</creator><creator>Hai-Li, Yu</creator><creator>Lian-Xi, Xing</creator><general>Springer Netherlands</general><general>Springer Nature B.V</general><scope>AAYXX</scope><scope>CITATION</scope><scope>8FE</scope><scope>8FH</scope><scope>AFKRA</scope><scope>AZQEC</scope><scope>BBNVY</scope><scope>BENPR</scope><scope>BHPHI</scope><scope>CCPQU</scope><scope>DWQXO</scope><scope>GNUQQ</scope><scope>HCIFZ</scope><scope>LK8</scope><scope>M7P</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>PRINS</scope></search><sort><creationdate>20170601</creationdate><title>The complete mitochondrial genome of the monophagous moth Protegira songi (Lepidoptera: Noctuidae)</title><author>Xiao-Hui, Guo ; Ming-Yang, Cheng ; Ya-Feng, Hou ; Tuan-Tuan, Deng ; Sha, Zhao ; Hai-Li, Yu ; Lian-Xi, Xing</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c316t-25509a7f66a86dd9f5672bbf13d8c5eb6a0bc79491895c7bc6f70b9aec71428d3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2017</creationdate><topic>Animal Genetics and Genomics</topic><topic>Biodiversity</topic><topic>Biomedical and Life Sciences</topic><topic>Conservation Biology/Ecology</topic><topic>Ecology</topic><topic>Evolutionary Biology</topic><topic>Genomes</topic><topic>Life Sciences</topic><topic>Mitochondria</topic><topic>Mitochondrial DNA</topic><topic>Phylogenetics</topic><topic>Phylogeny</topic><topic>Plant Genetics and Genomics</topic><topic>rRNA</topic><topic>Technical Note</topic><topic>tRNA</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Xiao-Hui, Guo</creatorcontrib><creatorcontrib>Ming-Yang, Cheng</creatorcontrib><creatorcontrib>Ya-Feng, Hou</creatorcontrib><creatorcontrib>Tuan-Tuan, Deng</creatorcontrib><creatorcontrib>Sha, Zhao</creatorcontrib><creatorcontrib>Hai-Li, Yu</creatorcontrib><creatorcontrib>Lian-Xi, Xing</creatorcontrib><collection>CrossRef</collection><collection>ProQuest SciTech Collection</collection><collection>ProQuest Natural Science Collection</collection><collection>ProQuest Central UK/Ireland</collection><collection>ProQuest Central Essentials</collection><collection>Biological Science Collection</collection><collection>ProQuest Central</collection><collection>Natural Science Collection</collection><collection>ProQuest One Community College</collection><collection>ProQuest Central Korea</collection><collection>ProQuest Central Student</collection><collection>SciTech Premium Collection</collection><collection>ProQuest Biological Science Collection</collection><collection>Biological Science Database</collection><collection>ProQuest One Academic Eastern Edition (DO NOT USE)</collection><collection>ProQuest One Academic</collection><collection>ProQuest One Academic UKI Edition</collection><collection>ProQuest Central China</collection><jtitle>Conservation genetics resources</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Xiao-Hui, Guo</au><au>Ming-Yang, Cheng</au><au>Ya-Feng, Hou</au><au>Tuan-Tuan, Deng</au><au>Sha, Zhao</au><au>Hai-Li, Yu</au><au>Lian-Xi, Xing</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>The complete mitochondrial genome of the monophagous moth Protegira songi (Lepidoptera: Noctuidae)</atitle><jtitle>Conservation genetics resources</jtitle><stitle>Conservation Genet Resour</stitle><date>2017-06-01</date><risdate>2017</risdate><volume>9</volume><issue>2</issue><spage>277</spage><epage>279</epage><pages>277-279</pages><issn>1877-7252</issn><eissn>1877-7260</eissn><abstract>Protegira songi
is a monophagous moth feeding on the Chinese protected tree of
Eucommia ulmoides
and has become a main defoliator of this rare tree. We determined the complete mitochondrial genome of the
P. songi
. The genome is 15,410 bp long with an A+T content of 79.6%. There are 37 typical animal mitochondrial genes, 13 protein-
coding
genes (PCGs), 22 tRNA and 2 rRNA genes and A+T-rich region. The tRNA gene
trnM
is rearranged to the upstream of the
trnl-trnQ-trnM
cluster compared with the putative ancestral arrangement of insects. The A+T-region is located between
rrnS
and
trnM
with a length of 340 bp and A+T content of 93.24%. Addition to the A+T-rich region, non-coding sequences of the mtDNA genome harbored 15 intergenic spacers. Phylogenetic tree based on the 10 complete mitochondrial genome sequences of closely related moth species accords well with the morphological phylogenetic analysis.</abstract><cop>Dordrecht</cop><pub>Springer Netherlands</pub><doi>10.1007/s12686-016-0672-2</doi><tpages>3</tpages></addata></record> |
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| language | eng |
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| subjects | Animal Genetics and Genomics Biodiversity Biomedical and Life Sciences Conservation Biology/Ecology Ecology Evolutionary Biology Genomes Life Sciences Mitochondria Mitochondrial DNA Phylogenetics Phylogeny Plant Genetics and Genomics rRNA Technical Note tRNA |
| title | The complete mitochondrial genome of the monophagous moth Protegira songi (Lepidoptera: Noctuidae) |
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