Microsatellite loci for the host-generalist “zooxanthella” Symbiodinium trenchi and other Clade D Symbiodinium
Nine new polymorphic microsatellites were developed for Symbiodinium trenchi (sensu type D1a ). These loci were tested on populations of S. trenchi from corals in Palau and 3–19 alleles were observed at each haploid locus with an average of 7 alleles. Many of the primer sets successfully amplified l...
Gespeichert in:
| Veröffentlicht in: | Conservation genetics resources 2011-07, Vol.3 (3), p.541-544 |
|---|---|
| Hauptverfasser: | , , |
| Format: | Artikel |
| Sprache: | eng |
| Schlagworte: | |
| Online-Zugang: | Volltext |
| Tags: |
Tag hinzufügen
Keine Tags, Fügen Sie den ersten Tag hinzu!
|
| container_end_page | 544 |
|---|---|
| container_issue | 3 |
| container_start_page | 541 |
| container_title | Conservation genetics resources |
| container_volume | 3 |
| creator | Wham, Drew C. Pettay, Daniel T. LaJeunesse, Todd C. |
| description | Nine new polymorphic microsatellites were developed for
Symbiodinium trenchi
(sensu type
D1a
). These loci were tested on populations of
S. trenchi
from corals in Palau and 3–19 alleles were observed at each haploid locus with an average of 7 alleles. Many of the primer sets successfully amplified loci within other members of
Symbiodinium
clade D, demonstrating their utility across the group. Clade D
Symbiodinium
spp. are generally regarded as thermally tolerant and are common in coral reef habitats with warm, turbid, and/or variable environmental conditions. These population genetic markers are therefore useful for investigating how stress-tolerant symbionts may respond to climate warming through range expansion and/or by developing new associations with various host cnidarians. Additionally, the cross-lineage utility of these markers should help delineate the evolutionary relationships among members of this clade. |
| doi_str_mv | 10.1007/s12686-011-9399-2 |
| format | Article |
| fullrecord | <record><control><sourceid>proquest_cross</sourceid><recordid>TN_cdi_proquest_journals_2406975421</recordid><sourceformat>XML</sourceformat><sourcesystem>PC</sourcesystem><sourcerecordid>2406975421</sourcerecordid><originalsourceid>FETCH-LOGICAL-c382t-c8bab01d644aabbcfd906cea4f500340ce1a155e769328480dc8000d90ea3a33</originalsourceid><addsrcrecordid>eNp1kM1KAzEURgdRsFYfwF3AdfQmmcnMLKX-QsWF3YdMJtOmpJOapGBd9UH05fokplQUF67uhXu-78LJsnMClwSgvAqE8opjIATXrK4xPcgGpCpLXFIOhz97QY-zkxDmALxilA4y_2SUd0FGba2JGlmnDOqcR3Gm0cyFiKe6115aEyLabj7enXuTfTpaK7ebT_SyXjTGtaY3qwWKXvdqZpDsW-QS49HIylajmz_YaXbUSRv02fccZpO728noAY-f7x9H12OsWEUjVlUjGyAtz3Mpm0Z1bQ1caZl3BQDLQWkiSVHokteMVnkFraoAIFFaMsnYMLvY1y69e13pEMXcrXyfPgqaA6_LIqckUWRP7SwErzux9GYh_VoQEDuzYm9WJLNiZ1bQlKH7TEhsP9X-t_n_0BeRf3-g</addsrcrecordid><sourcetype>Aggregation Database</sourcetype><iscdi>true</iscdi><recordtype>article</recordtype><pqid>2406975421</pqid></control><display><type>article</type><title>Microsatellite loci for the host-generalist “zooxanthella” Symbiodinium trenchi and other Clade D Symbiodinium</title><source>Springer Nature - Complete Springer Journals</source><creator>Wham, Drew C. ; Pettay, Daniel T. ; LaJeunesse, Todd C.</creator><creatorcontrib>Wham, Drew C. ; Pettay, Daniel T. ; LaJeunesse, Todd C.</creatorcontrib><description>Nine new polymorphic microsatellites were developed for
Symbiodinium trenchi
(sensu type
D1a
). These loci were tested on populations of
S. trenchi
from corals in Palau and 3–19 alleles were observed at each haploid locus with an average of 7 alleles. Many of the primer sets successfully amplified loci within other members of
Symbiodinium
clade D, demonstrating their utility across the group. Clade D
Symbiodinium
spp. are generally regarded as thermally tolerant and are common in coral reef habitats with warm, turbid, and/or variable environmental conditions. These population genetic markers are therefore useful for investigating how stress-tolerant symbionts may respond to climate warming through range expansion and/or by developing new associations with various host cnidarians. Additionally, the cross-lineage utility of these markers should help delineate the evolutionary relationships among members of this clade.</description><identifier>ISSN: 1877-7252</identifier><identifier>EISSN: 1877-7260</identifier><identifier>DOI: 10.1007/s12686-011-9399-2</identifier><language>eng</language><publisher>Dordrecht: Springer Netherlands</publisher><subject>Alleles ; Animal Genetics and Genomics ; Biodiversity ; Biomedical and Life Sciences ; Conservation Biology/Ecology ; Coral reefs ; Corals ; Ecology ; Environmental conditions ; Evolutionary Biology ; Genetic markers ; Life Sciences ; Microsatellites ; Plant Genetics and Genomics ; Population genetics ; Range extension ; Symbiodinium ; Symbionts ; Technical Note</subject><ispartof>Conservation genetics resources, 2011-07, Vol.3 (3), p.541-544</ispartof><rights>Springer Science+Business Media B.V. 2011</rights><rights>Springer Science+Business Media B.V. 2011.</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c382t-c8bab01d644aabbcfd906cea4f500340ce1a155e769328480dc8000d90ea3a33</citedby><cites>FETCH-LOGICAL-c382t-c8bab01d644aabbcfd906cea4f500340ce1a155e769328480dc8000d90ea3a33</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://link.springer.com/content/pdf/10.1007/s12686-011-9399-2$$EPDF$$P50$$Gspringer$$H</linktopdf><linktohtml>$$Uhttps://link.springer.com/10.1007/s12686-011-9399-2$$EHTML$$P50$$Gspringer$$H</linktohtml><link.rule.ids>314,776,780,27901,27902,41464,42533,51294</link.rule.ids></links><search><creatorcontrib>Wham, Drew C.</creatorcontrib><creatorcontrib>Pettay, Daniel T.</creatorcontrib><creatorcontrib>LaJeunesse, Todd C.</creatorcontrib><title>Microsatellite loci for the host-generalist “zooxanthella” Symbiodinium trenchi and other Clade D Symbiodinium</title><title>Conservation genetics resources</title><addtitle>Conservation Genet Resour</addtitle><description>Nine new polymorphic microsatellites were developed for
Symbiodinium trenchi
(sensu type
D1a
). These loci were tested on populations of
S. trenchi
from corals in Palau and 3–19 alleles were observed at each haploid locus with an average of 7 alleles. Many of the primer sets successfully amplified loci within other members of
Symbiodinium
clade D, demonstrating their utility across the group. Clade D
Symbiodinium
spp. are generally regarded as thermally tolerant and are common in coral reef habitats with warm, turbid, and/or variable environmental conditions. These population genetic markers are therefore useful for investigating how stress-tolerant symbionts may respond to climate warming through range expansion and/or by developing new associations with various host cnidarians. Additionally, the cross-lineage utility of these markers should help delineate the evolutionary relationships among members of this clade.</description><subject>Alleles</subject><subject>Animal Genetics and Genomics</subject><subject>Biodiversity</subject><subject>Biomedical and Life Sciences</subject><subject>Conservation Biology/Ecology</subject><subject>Coral reefs</subject><subject>Corals</subject><subject>Ecology</subject><subject>Environmental conditions</subject><subject>Evolutionary Biology</subject><subject>Genetic markers</subject><subject>Life Sciences</subject><subject>Microsatellites</subject><subject>Plant Genetics and Genomics</subject><subject>Population genetics</subject><subject>Range extension</subject><subject>Symbiodinium</subject><subject>Symbionts</subject><subject>Technical Note</subject><issn>1877-7252</issn><issn>1877-7260</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2011</creationdate><recordtype>article</recordtype><sourceid>BENPR</sourceid><recordid>eNp1kM1KAzEURgdRsFYfwF3AdfQmmcnMLKX-QsWF3YdMJtOmpJOapGBd9UH05fokplQUF67uhXu-78LJsnMClwSgvAqE8opjIATXrK4xPcgGpCpLXFIOhz97QY-zkxDmALxilA4y_2SUd0FGba2JGlmnDOqcR3Gm0cyFiKe6115aEyLabj7enXuTfTpaK7ebT_SyXjTGtaY3qwWKXvdqZpDsW-QS49HIylajmz_YaXbUSRv02fccZpO728noAY-f7x9H12OsWEUjVlUjGyAtz3Mpm0Z1bQ1caZl3BQDLQWkiSVHokteMVnkFraoAIFFaMsnYMLvY1y69e13pEMXcrXyfPgqaA6_LIqckUWRP7SwErzux9GYh_VoQEDuzYm9WJLNiZ1bQlKH7TEhsP9X-t_n_0BeRf3-g</recordid><startdate>20110701</startdate><enddate>20110701</enddate><creator>Wham, Drew C.</creator><creator>Pettay, Daniel T.</creator><creator>LaJeunesse, Todd C.</creator><general>Springer Netherlands</general><general>Springer Nature B.V</general><scope>AAYXX</scope><scope>CITATION</scope><scope>8FE</scope><scope>8FH</scope><scope>AFKRA</scope><scope>AZQEC</scope><scope>BBNVY</scope><scope>BENPR</scope><scope>BHPHI</scope><scope>CCPQU</scope><scope>DWQXO</scope><scope>GNUQQ</scope><scope>HCIFZ</scope><scope>LK8</scope><scope>M7P</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>PRINS</scope></search><sort><creationdate>20110701</creationdate><title>Microsatellite loci for the host-generalist “zooxanthella” Symbiodinium trenchi and other Clade D Symbiodinium</title><author>Wham, Drew C. ; Pettay, Daniel T. ; LaJeunesse, Todd C.</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c382t-c8bab01d644aabbcfd906cea4f500340ce1a155e769328480dc8000d90ea3a33</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2011</creationdate><topic>Alleles</topic><topic>Animal Genetics and Genomics</topic><topic>Biodiversity</topic><topic>Biomedical and Life Sciences</topic><topic>Conservation Biology/Ecology</topic><topic>Coral reefs</topic><topic>Corals</topic><topic>Ecology</topic><topic>Environmental conditions</topic><topic>Evolutionary Biology</topic><topic>Genetic markers</topic><topic>Life Sciences</topic><topic>Microsatellites</topic><topic>Plant Genetics and Genomics</topic><topic>Population genetics</topic><topic>Range extension</topic><topic>Symbiodinium</topic><topic>Symbionts</topic><topic>Technical Note</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Wham, Drew C.</creatorcontrib><creatorcontrib>Pettay, Daniel T.</creatorcontrib><creatorcontrib>LaJeunesse, Todd C.</creatorcontrib><collection>CrossRef</collection><collection>ProQuest SciTech Collection</collection><collection>ProQuest Natural Science Collection</collection><collection>ProQuest Central UK/Ireland</collection><collection>ProQuest Central Essentials</collection><collection>Biological Science Collection</collection><collection>ProQuest Central</collection><collection>Natural Science Collection</collection><collection>ProQuest One Community College</collection><collection>ProQuest Central Korea</collection><collection>ProQuest Central Student</collection><collection>SciTech Premium Collection</collection><collection>ProQuest Biological Science Collection</collection><collection>Biological Science Database</collection><collection>ProQuest One Academic Eastern Edition (DO NOT USE)</collection><collection>ProQuest One Academic</collection><collection>ProQuest One Academic UKI Edition</collection><collection>ProQuest Central China</collection><jtitle>Conservation genetics resources</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Wham, Drew C.</au><au>Pettay, Daniel T.</au><au>LaJeunesse, Todd C.</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Microsatellite loci for the host-generalist “zooxanthella” Symbiodinium trenchi and other Clade D Symbiodinium</atitle><jtitle>Conservation genetics resources</jtitle><stitle>Conservation Genet Resour</stitle><date>2011-07-01</date><risdate>2011</risdate><volume>3</volume><issue>3</issue><spage>541</spage><epage>544</epage><pages>541-544</pages><issn>1877-7252</issn><eissn>1877-7260</eissn><abstract>Nine new polymorphic microsatellites were developed for
Symbiodinium trenchi
(sensu type
D1a
). These loci were tested on populations of
S. trenchi
from corals in Palau and 3–19 alleles were observed at each haploid locus with an average of 7 alleles. Many of the primer sets successfully amplified loci within other members of
Symbiodinium
clade D, demonstrating their utility across the group. Clade D
Symbiodinium
spp. are generally regarded as thermally tolerant and are common in coral reef habitats with warm, turbid, and/or variable environmental conditions. These population genetic markers are therefore useful for investigating how stress-tolerant symbionts may respond to climate warming through range expansion and/or by developing new associations with various host cnidarians. Additionally, the cross-lineage utility of these markers should help delineate the evolutionary relationships among members of this clade.</abstract><cop>Dordrecht</cop><pub>Springer Netherlands</pub><doi>10.1007/s12686-011-9399-2</doi><tpages>4</tpages></addata></record> |
| fulltext | fulltext |
| identifier | ISSN: 1877-7252 |
| ispartof | Conservation genetics resources, 2011-07, Vol.3 (3), p.541-544 |
| issn | 1877-7252 1877-7260 |
| language | eng |
| recordid | cdi_proquest_journals_2406975421 |
| source | Springer Nature - Complete Springer Journals |
| subjects | Alleles Animal Genetics and Genomics Biodiversity Biomedical and Life Sciences Conservation Biology/Ecology Coral reefs Corals Ecology Environmental conditions Evolutionary Biology Genetic markers Life Sciences Microsatellites Plant Genetics and Genomics Population genetics Range extension Symbiodinium Symbionts Technical Note |
| title | Microsatellite loci for the host-generalist “zooxanthella” Symbiodinium trenchi and other Clade D Symbiodinium |
| url | https://sfx.bib-bvb.de/sfx_tum?ctx_ver=Z39.88-2004&ctx_enc=info:ofi/enc:UTF-8&ctx_tim=2025-02-02T15%3A18%3A09IST&url_ver=Z39.88-2004&url_ctx_fmt=infofi/fmt:kev:mtx:ctx&rfr_id=info:sid/primo.exlibrisgroup.com:primo3-Article-proquest_cross&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rft.genre=article&rft.atitle=Microsatellite%20loci%20for%20the%20host-generalist%20%E2%80%9Czooxanthella%E2%80%9D%20Symbiodinium%20trenchi%20and%20other%20Clade%20D%20Symbiodinium&rft.jtitle=Conservation%20genetics%20resources&rft.au=Wham,%20Drew%20C.&rft.date=2011-07-01&rft.volume=3&rft.issue=3&rft.spage=541&rft.epage=544&rft.pages=541-544&rft.issn=1877-7252&rft.eissn=1877-7260&rft_id=info:doi/10.1007/s12686-011-9399-2&rft_dat=%3Cproquest_cross%3E2406975421%3C/proquest_cross%3E%3Curl%3E%3C/url%3E&disable_directlink=true&sfx.directlink=off&sfx.report_link=0&rft_id=info:oai/&rft_pqid=2406975421&rft_id=info:pmid/&rfr_iscdi=true |