Adaptive Feature Selection Guided Deep Forest for COVID-19 Classification with Chest CT

Chest computed tomography (CT) becomes an effective tool to assist the diagnosis of coronavirus disease-19 (COVID-19). Due to the outbreak of COVID-19 worldwide, using the computed-aided diagnosis technique for COVID-19 classification based on CT images could largely alleviate the burden of clinicia...

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Veröffentlicht in:arXiv.org 2020-05
Hauptverfasser: Sun, Liang, Mo, Zhanhao, Yan, Fuhua, Xia, Liming, Shan, Fei, Ding, Zhongxiang, Shao, Wei, Shi, Feng, Yuan, Huan, Jiang, Huiting, Wu, Dijia, Wei, Ying, Gao, Yaozong, Gao, Wanchun, He, Sui, Zhang, Daoqiang, Shen, Dinggang
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creator Sun, Liang
Mo, Zhanhao
Yan, Fuhua
Xia, Liming
Shan, Fei
Ding, Zhongxiang
Shao, Wei
Shi, Feng
Yuan, Huan
Jiang, Huiting
Wu, Dijia
Wei, Ying
Gao, Yaozong
Gao, Wanchun
He, Sui
Zhang, Daoqiang
Shen, Dinggang
description Chest computed tomography (CT) becomes an effective tool to assist the diagnosis of coronavirus disease-19 (COVID-19). Due to the outbreak of COVID-19 worldwide, using the computed-aided diagnosis technique for COVID-19 classification based on CT images could largely alleviate the burden of clinicians. In this paper, we propose an Adaptive Feature Selection guided Deep Forest (AFS-DF) for COVID-19 classification based on chest CT images. Specifically, we first extract location-specific features from CT images. Then, in order to capture the high-level representation of these features with the relatively small-scale data, we leverage a deep forest model to learn high-level representation of the features. Moreover, we propose a feature selection method based on the trained deep forest model to reduce the redundancy of features, where the feature selection could be adaptively incorporated with the COVID-19 classification model. We evaluated our proposed AFS-DF on COVID-19 dataset with 1495 patients of COVID-19 and 1027 patients of community acquired pneumonia (CAP). The accuracy (ACC), sensitivity (SEN), specificity (SPE) and AUC achieved by our method are 91.79%, 93.05%, 89.95% and 96.35%, respectively. Experimental results on the COVID-19 dataset suggest that the proposed AFS-DF achieves superior performance in COVID-19 vs. CAP classification, compared with 4 widely used machine learning methods.
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Due to the outbreak of COVID-19 worldwide, using the computed-aided diagnosis technique for COVID-19 classification based on CT images could largely alleviate the burden of clinicians. In this paper, we propose an Adaptive Feature Selection guided Deep Forest (AFS-DF) for COVID-19 classification based on chest CT images. Specifically, we first extract location-specific features from CT images. Then, in order to capture the high-level representation of these features with the relatively small-scale data, we leverage a deep forest model to learn high-level representation of the features. Moreover, we propose a feature selection method based on the trained deep forest model to reduce the redundancy of features, where the feature selection could be adaptively incorporated with the COVID-19 classification model. We evaluated our proposed AFS-DF on COVID-19 dataset with 1495 patients of COVID-19 and 1027 patients of community acquired pneumonia (CAP). The accuracy (ACC), sensitivity (SEN), specificity (SPE) and AUC achieved by our method are 91.79%, 93.05%, 89.95% and 96.35%, respectively. Experimental results on the COVID-19 dataset suggest that the proposed AFS-DF achieves superior performance in COVID-19 vs. CAP classification, compared with 4 widely used machine learning methods.</description><identifier>EISSN: 2331-8422</identifier><language>eng</language><publisher>Ithaca: Cornell University Library, arXiv.org</publisher><subject>Chest ; Classification ; Computed tomography ; Coronaviruses ; COVID-19 ; Datasets ; Diagnosis ; Feature extraction ; Forests ; Image classification ; Machine learning ; Medical imaging ; Redundancy ; Representations ; Viral diseases</subject><ispartof>arXiv.org, 2020-05</ispartof><rights>2020. This work is published under http://arxiv.org/licenses/nonexclusive-distrib/1.0/ (the “License”). 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subjects Chest
Classification
Computed tomography
Coronaviruses
COVID-19
Datasets
Diagnosis
Feature extraction
Forests
Image classification
Machine learning
Medical imaging
Redundancy
Representations
Viral diseases
title Adaptive Feature Selection Guided Deep Forest for COVID-19 Classification with Chest CT
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