Characteristics and complete genome sequence of the virulent Vibrio alginolyticus phage VAP7, isolated in Hainan, China

A novel Vibrio alginolyticus phage, VAP7, was isolated from seawater collected from Sanya, Hainan province, China. Whole-genome sequencing analysis revealed that phage VAP7 has a linear, double-stranded DNA genome of 144,685 bp with an average G+C content of 41.9% and a high degree of sequence simil...

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Veröffentlicht in:Archives of virology 2020-04, Vol.165 (4), p.947-953
Hauptverfasser: Gao, Mingming, Qin, Yanhong, Fan, Hang, Zhang, Xianglilan, Li, Puyuan, Liu, Huiying, Pei, Guangqian, Mi, Zhiqiang, Xu, Xuling, Tong, Yigang, Bai, Changqing
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container_issue 4
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container_title Archives of virology
container_volume 165
creator Gao, Mingming
Qin, Yanhong
Fan, Hang
Zhang, Xianglilan
Li, Puyuan
Liu, Huiying
Pei, Guangqian
Mi, Zhiqiang
Xu, Xuling
Tong, Yigang
Bai, Changqing
description A novel Vibrio alginolyticus phage, VAP7, was isolated from seawater collected from Sanya, Hainan province, China. Whole-genome sequencing analysis revealed that phage VAP7 has a linear, double-stranded DNA genome of 144,685 bp with an average G+C content of 41.9% and a high degree of sequence similarity to Vibrio phage VP-1. Annotation results identified 193 open reading frames and one transfer RNA-encoding gene in the phage genome. The morphology and the results of phylogenetic analysis suggest that VAP7 should be classified as a new member of the family Ackermannviridae . Moreover, phage VAP7 grew over a wide pH (5.0-10.0) and temperature (4-40 °C) range. Host-range experiments revealed that VAP7 could infect 31  Vibrio alginolyticus strains. Thus, VAP7 infecting Vibrio alginolyticus strains represents a potential new candidate for use in phage therapy.
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Whole-genome sequencing analysis revealed that phage VAP7 has a linear, double-stranded DNA genome of 144,685 bp with an average G+C content of 41.9% and a high degree of sequence similarity to Vibrio phage VP-1. Annotation results identified 193 open reading frames and one transfer RNA-encoding gene in the phage genome. The morphology and the results of phylogenetic analysis suggest that VAP7 should be classified as a new member of the family Ackermannviridae . Moreover, phage VAP7 grew over a wide pH (5.0-10.0) and temperature (4-40 °C) range. Host-range experiments revealed that VAP7 could infect 31  Vibrio alginolyticus strains. 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Whole-genome sequencing analysis revealed that phage VAP7 has a linear, double-stranded DNA genome of 144,685 bp with an average G+C content of 41.9% and a high degree of sequence similarity to Vibrio phage VP-1. Annotation results identified 193 open reading frames and one transfer RNA-encoding gene in the phage genome. The morphology and the results of phylogenetic analysis suggest that VAP7 should be classified as a new member of the family Ackermannviridae . Moreover, phage VAP7 grew over a wide pH (5.0-10.0) and temperature (4-40 °C) range. Host-range experiments revealed that VAP7 could infect 31  Vibrio alginolyticus strains. Thus, VAP7 infecting Vibrio alginolyticus strains represents a potential new candidate for use in phage therapy.</abstract><cop>Vienna</cop><pub>Springer Vienna</pub><pmid>32130520</pmid><doi>10.1007/s00705-020-04535-4</doi><tpages>7</tpages><orcidid>https://orcid.org/0000-0003-1343-6244</orcidid><orcidid>https://orcid.org/0000-0002-7927-1684</orcidid></addata></record>
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subjects Bacteriophages - classification
Bacteriophages - genetics
Bacteriophages - pathogenicity
Bacteriophages - physiology
Base Composition
Biomedical and Life Sciences
Biomedicine
Brief Report
China
DNA sequencing
Genome, Viral
Genomes
Genomics
Host Specificity
Infectious Diseases
Life Sciences & Biomedicine
Medical Microbiology
Nucleotide sequence
Open Reading Frames
Phages
Phylogeny
Podoviridae - classification
Podoviridae - genetics
Podoviridae - pathogenicity
Ribonucleic acid
RNA
Science & Technology
Seawater - virology
Shells
Transfer RNA
Vibrio alginolyticus
Vibrio alginolyticus - virology
Virology
Virulence
Whole genome sequencing
title Characteristics and complete genome sequence of the virulent Vibrio alginolyticus phage VAP7, isolated in Hainan, China
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