Investigation and Classification of MRI Brain Tumors Using Feature Extraction Technique
Purpose Medical imaging is a novel research area in the domain of image processing for the research community. Features computed from MRI images provide a high level of information used in medical diagnostics. This paper addresses the classification of different types of brain tumors studied in MRI...
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Veröffentlicht in: | Journal of medical and biological engineering 2020-04, Vol.40 (2), p.307-317 |
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description | Purpose
Medical imaging is a novel research area in the domain of image processing for the research community. Features computed from MRI images provide a high level of information used in medical diagnostics. This paper addresses the classification of different types of brain tumors studied in MRI images using feature extraction techniques. It may help in the effectiveness of brain tumor treatment that depends on the early detection needed to distinguish between benign and malignant tumors.
Method
We present in this paper, a novel framework to investigate and classify brain tumors in DICOM format T2-FLAIR MRI images. Spatial filters are used to remove undesired information and noises. Segmentation is done using a thresholding method to separate the tumorous regions from healthy regions. Then, the Discrete Wavelet Transform is employed for reducing the dimensionality of the images followed by Principal Component Analysis, which reduces the dimensions further while keeping the only useful information. The gray level co-occurrence matrix is implemented to extract the texture features that can be fed into a Support Vector machine for further classification.
Results
The proposed framework is able to distinguish benign and malignant tumors precisely. The extracted features show that the benign tumor is more homogeneous with higher energy than malignant and have lower values of contrast, correlation, and entropy than malignant. The results also illustrate that benign tumors have more irregular appearance than malignant tumors. The accuracy of the proposed method is 95%. The errors in the segmentation and high dimensionality of the DICOM images causes some lack of accuracy.
Conclusion
The extracted features demonstrate that the proposed method can be used to investigate and classify the types of brain tumors. In future work, it can also be tested for tumor detection of other parts of the body. The proposed framework can be used as a quick guidance tool for the radiologists. |
doi_str_mv | 10.1007/s40846-020-00510-1 |
format | Article |
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Medical imaging is a novel research area in the domain of image processing for the research community. Features computed from MRI images provide a high level of information used in medical diagnostics. This paper addresses the classification of different types of brain tumors studied in MRI images using feature extraction techniques. It may help in the effectiveness of brain tumor treatment that depends on the early detection needed to distinguish between benign and malignant tumors.
Method
We present in this paper, a novel framework to investigate and classify brain tumors in DICOM format T2-FLAIR MRI images. Spatial filters are used to remove undesired information and noises. Segmentation is done using a thresholding method to separate the tumorous regions from healthy regions. Then, the Discrete Wavelet Transform is employed for reducing the dimensionality of the images followed by Principal Component Analysis, which reduces the dimensions further while keeping the only useful information. The gray level co-occurrence matrix is implemented to extract the texture features that can be fed into a Support Vector machine for further classification.
Results
The proposed framework is able to distinguish benign and malignant tumors precisely. The extracted features show that the benign tumor is more homogeneous with higher energy than malignant and have lower values of contrast, correlation, and entropy than malignant. The results also illustrate that benign tumors have more irregular appearance than malignant tumors. The accuracy of the proposed method is 95%. The errors in the segmentation and high dimensionality of the DICOM images causes some lack of accuracy.
Conclusion
The extracted features demonstrate that the proposed method can be used to investigate and classify the types of brain tumors. In future work, it can also be tested for tumor detection of other parts of the body. The proposed framework can be used as a quick guidance tool for the radiologists.</description><identifier>ISSN: 1609-0985</identifier><identifier>EISSN: 2199-4757</identifier><identifier>DOI: 10.1007/s40846-020-00510-1</identifier><language>eng</language><publisher>Berlin/Heidelberg: Springer Berlin Heidelberg</publisher><subject>Benign ; Biomedical Engineering and Bioengineering ; Brain ; Brain cancer ; Brain research ; Brain tumors ; Cell Biology ; Classification ; Discrete Wavelet Transform ; Engineering ; Entropy ; Feature extraction ; Image classification ; Image filters ; Image processing ; Image segmentation ; Imaging ; Investigations ; Magnetic resonance imaging ; Medical imaging ; Medical research ; Neuroimaging ; Original Article ; Principal components analysis ; Radiology ; Spatial filtering ; Support vector machines ; Tumors ; Wavelet transforms</subject><ispartof>Journal of medical and biological engineering, 2020-04, Vol.40 (2), p.307-317</ispartof><rights>Taiwanese Society of Biomedical Engineering 2020</rights><rights>2020© Taiwanese Society of Biomedical Engineering 2020</rights><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c356t-d235d9ab6d29c5ad8e6311040973620b36dc20f572b74a0fa184d0f53f1c8933</citedby><cites>FETCH-LOGICAL-c356t-d235d9ab6d29c5ad8e6311040973620b36dc20f572b74a0fa184d0f53f1c8933</cites><orcidid>0000-0001-9849-6320</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://link.springer.com/content/pdf/10.1007/s40846-020-00510-1$$EPDF$$P50$$Gspringer$$H</linktopdf><linktohtml>$$Uhttps://link.springer.com/10.1007/s40846-020-00510-1$$EHTML$$P50$$Gspringer$$H</linktohtml><link.rule.ids>314,777,781,27905,27906,41469,42538,51300</link.rule.ids></links><search><creatorcontrib>Hamid, Marwan A. A.</creatorcontrib><creatorcontrib>Khan, Najeed Ahmed</creatorcontrib><title>Investigation and Classification of MRI Brain Tumors Using Feature Extraction Technique</title><title>Journal of medical and biological engineering</title><addtitle>J. Med. Biol. Eng</addtitle><description>Purpose
Medical imaging is a novel research area in the domain of image processing for the research community. Features computed from MRI images provide a high level of information used in medical diagnostics. This paper addresses the classification of different types of brain tumors studied in MRI images using feature extraction techniques. It may help in the effectiveness of brain tumor treatment that depends on the early detection needed to distinguish between benign and malignant tumors.
Method
We present in this paper, a novel framework to investigate and classify brain tumors in DICOM format T2-FLAIR MRI images. Spatial filters are used to remove undesired information and noises. Segmentation is done using a thresholding method to separate the tumorous regions from healthy regions. Then, the Discrete Wavelet Transform is employed for reducing the dimensionality of the images followed by Principal Component Analysis, which reduces the dimensions further while keeping the only useful information. The gray level co-occurrence matrix is implemented to extract the texture features that can be fed into a Support Vector machine for further classification.
Results
The proposed framework is able to distinguish benign and malignant tumors precisely. The extracted features show that the benign tumor is more homogeneous with higher energy than malignant and have lower values of contrast, correlation, and entropy than malignant. The results also illustrate that benign tumors have more irregular appearance than malignant tumors. The accuracy of the proposed method is 95%. The errors in the segmentation and high dimensionality of the DICOM images causes some lack of accuracy.
Conclusion
The extracted features demonstrate that the proposed method can be used to investigate and classify the types of brain tumors. In future work, it can also be tested for tumor detection of other parts of the body. The proposed framework can be used as a quick guidance tool for the radiologists.</description><subject>Benign</subject><subject>Biomedical Engineering and Bioengineering</subject><subject>Brain</subject><subject>Brain cancer</subject><subject>Brain research</subject><subject>Brain tumors</subject><subject>Cell Biology</subject><subject>Classification</subject><subject>Discrete Wavelet Transform</subject><subject>Engineering</subject><subject>Entropy</subject><subject>Feature extraction</subject><subject>Image classification</subject><subject>Image filters</subject><subject>Image processing</subject><subject>Image segmentation</subject><subject>Imaging</subject><subject>Investigations</subject><subject>Magnetic resonance imaging</subject><subject>Medical imaging</subject><subject>Medical research</subject><subject>Neuroimaging</subject><subject>Original Article</subject><subject>Principal components analysis</subject><subject>Radiology</subject><subject>Spatial filtering</subject><subject>Support vector machines</subject><subject>Tumors</subject><subject>Wavelet transforms</subject><issn>1609-0985</issn><issn>2199-4757</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2020</creationdate><recordtype>article</recordtype><recordid>eNp9kM9LwzAUx4MoOOb-AU8Bz9GXpEmbo45NBxNBKh5DlqYzY0tn0or-9-tWwZvv8niP7w_4IHRN4ZYC5HcpgyKTBBgQAEGB0DM0YlQpkuUiP0cjKkERUIW4RJOUNtAPV1LSYoTeF-HLpdavTeubgE2o8HRrUvK1t8OrqfHz6wI_ROMDLrtdExN-Sz6s8dyZtosOz77baOxJXDr7Efxn567QRW22yU1-9xiV81k5fSLLl8fF9H5JLBeyJRXjolJmJSumrDBV4SSnFDJQOZcMVlxWlkEtcrbKMwO1oUVW9TevqS0U52N0M8TuY9O3plZvmi6GvlEzXrCcCQ60V7FBZWOTUnS13ke_M_FHU9BHhHpAqHuE-oRQH018MKVeHNYu_kX_4zoAqYty8g</recordid><startdate>20200401</startdate><enddate>20200401</enddate><creator>Hamid, Marwan A. A.</creator><creator>Khan, Najeed Ahmed</creator><general>Springer Berlin Heidelberg</general><general>Springer Nature B.V</general><scope>AAYXX</scope><scope>CITATION</scope><scope>K9.</scope><orcidid>https://orcid.org/0000-0001-9849-6320</orcidid></search><sort><creationdate>20200401</creationdate><title>Investigation and Classification of MRI Brain Tumors Using Feature Extraction Technique</title><author>Hamid, Marwan A. A. ; Khan, Najeed Ahmed</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c356t-d235d9ab6d29c5ad8e6311040973620b36dc20f572b74a0fa184d0f53f1c8933</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2020</creationdate><topic>Benign</topic><topic>Biomedical Engineering and Bioengineering</topic><topic>Brain</topic><topic>Brain cancer</topic><topic>Brain research</topic><topic>Brain tumors</topic><topic>Cell Biology</topic><topic>Classification</topic><topic>Discrete Wavelet Transform</topic><topic>Engineering</topic><topic>Entropy</topic><topic>Feature extraction</topic><topic>Image classification</topic><topic>Image filters</topic><topic>Image processing</topic><topic>Image segmentation</topic><topic>Imaging</topic><topic>Investigations</topic><topic>Magnetic resonance imaging</topic><topic>Medical imaging</topic><topic>Medical research</topic><topic>Neuroimaging</topic><topic>Original Article</topic><topic>Principal components analysis</topic><topic>Radiology</topic><topic>Spatial filtering</topic><topic>Support vector machines</topic><topic>Tumors</topic><topic>Wavelet transforms</topic><toplevel>online_resources</toplevel><creatorcontrib>Hamid, Marwan A. A.</creatorcontrib><creatorcontrib>Khan, Najeed Ahmed</creatorcontrib><collection>CrossRef</collection><collection>ProQuest Health & Medical Complete (Alumni)</collection><jtitle>Journal of medical and biological engineering</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Hamid, Marwan A. A.</au><au>Khan, Najeed Ahmed</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Investigation and Classification of MRI Brain Tumors Using Feature Extraction Technique</atitle><jtitle>Journal of medical and biological engineering</jtitle><stitle>J. Med. Biol. Eng</stitle><date>2020-04-01</date><risdate>2020</risdate><volume>40</volume><issue>2</issue><spage>307</spage><epage>317</epage><pages>307-317</pages><issn>1609-0985</issn><eissn>2199-4757</eissn><abstract>Purpose
Medical imaging is a novel research area in the domain of image processing for the research community. Features computed from MRI images provide a high level of information used in medical diagnostics. This paper addresses the classification of different types of brain tumors studied in MRI images using feature extraction techniques. It may help in the effectiveness of brain tumor treatment that depends on the early detection needed to distinguish between benign and malignant tumors.
Method
We present in this paper, a novel framework to investigate and classify brain tumors in DICOM format T2-FLAIR MRI images. Spatial filters are used to remove undesired information and noises. Segmentation is done using a thresholding method to separate the tumorous regions from healthy regions. Then, the Discrete Wavelet Transform is employed for reducing the dimensionality of the images followed by Principal Component Analysis, which reduces the dimensions further while keeping the only useful information. The gray level co-occurrence matrix is implemented to extract the texture features that can be fed into a Support Vector machine for further classification.
Results
The proposed framework is able to distinguish benign and malignant tumors precisely. The extracted features show that the benign tumor is more homogeneous with higher energy than malignant and have lower values of contrast, correlation, and entropy than malignant. The results also illustrate that benign tumors have more irregular appearance than malignant tumors. The accuracy of the proposed method is 95%. The errors in the segmentation and high dimensionality of the DICOM images causes some lack of accuracy.
Conclusion
The extracted features demonstrate that the proposed method can be used to investigate and classify the types of brain tumors. In future work, it can also be tested for tumor detection of other parts of the body. The proposed framework can be used as a quick guidance tool for the radiologists.</abstract><cop>Berlin/Heidelberg</cop><pub>Springer Berlin Heidelberg</pub><doi>10.1007/s40846-020-00510-1</doi><tpages>11</tpages><orcidid>https://orcid.org/0000-0001-9849-6320</orcidid></addata></record> |
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subjects | Benign Biomedical Engineering and Bioengineering Brain Brain cancer Brain research Brain tumors Cell Biology Classification Discrete Wavelet Transform Engineering Entropy Feature extraction Image classification Image filters Image processing Image segmentation Imaging Investigations Magnetic resonance imaging Medical imaging Medical research Neuroimaging Original Article Principal components analysis Radiology Spatial filtering Support vector machines Tumors Wavelet transforms |
title | Investigation and Classification of MRI Brain Tumors Using Feature Extraction Technique |
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