Investigation of the hydrogen, halogen and pnicogen dimers by means of molecular face calculated by ab initio method
The noncovalent interactions, including hydrogen, halogen and pnicogen bonds, are widely known due to their significant role in both chemical reactions and biological phenomena. In this work, the potential acting on an electron in a molecule (PAEM) is introduced to present the strength and regiosele...
Gespeichert in:
Veröffentlicht in: | Theoretical chemistry accounts 2020-03, Vol.139 (3), Article 61 |
---|---|
Hauptverfasser: | , , , , |
Format: | Artikel |
Sprache: | eng |
Schlagworte: | |
Online-Zugang: | Volltext |
Tags: |
Tag hinzufügen
Keine Tags, Fügen Sie den ersten Tag hinzu!
|
container_end_page | |
---|---|
container_issue | 3 |
container_start_page | |
container_title | Theoretical chemistry accounts |
container_volume | 139 |
creator | Zhao, Dong-Xia Zhao, Jian Liu, Xiao-Nan Li, Jia-Ying Yang, Zhong-Zhi |
description | The noncovalent interactions, including hydrogen, halogen and pnicogen bonds, are widely known due to their significant role in both chemical reactions and biological phenomena. In this work, the potential acting on an electron in a molecule (PAEM) is introduced to present the strength and regioselectivity of noncovalent interaction. The PAEM height of noncovalent bonds,
D
pb
, can characterize the strength of the interaction, which has the linear relationships with noncovalent binding distances and binding energies. Here, we employ the molecular face theory (MFT) based on the PAEM to visualize reactive sites for the monomers in noncolvalent bond complexes. The electron density extremes on the molecular face (MF) regarded as the local reactivity descriptor are applied to exhibit the regioselectivity and preferred direction for monomers in hydrogen, halogen and pnicogen binding complexes, in good agreement with the chemical convention and ab initio calculation results. And the overlap distances of MF between dimers have been proposed and obtained to evaluate the strength of noncovalent interaction. The MFT provides a new way to demonstrate the regioselectivity and can be applied to larger and other type molecules in the future. |
doi_str_mv | 10.1007/s00214-020-2568-1 |
format | Article |
fullrecord | <record><control><sourceid>proquest_cross</sourceid><recordid>TN_cdi_proquest_journals_2375514327</recordid><sourceformat>XML</sourceformat><sourcesystem>PC</sourcesystem><sourcerecordid>2375514327</sourcerecordid><originalsourceid>FETCH-LOGICAL-c316t-1ab60c4bee84db04a66de021e630c7803cd4173d1f0cf1274c9d8595062019813</originalsourceid><addsrcrecordid>eNp1kEtLAzEUhYMoWKs_wF3AraM3j3l0KUVroeBGwV3IJJnOlJmkJlOh_97EKbhyde-F75zLOQjdEnggAOVjAKCEZ0Aho3lRZeQMzQhnNKOU8fPTXlXk8xJdhbCDiNO8nKFxbb9NGLutHDtnsWvw2BrcHrV3W2PvcSv7tGBpNd7bTv0euhuMD7g-4sFIG5JqcL1Rh1563EhlsJJ9ukajEyVr3NkuPoj82Dp9jS4a2Qdzc5pz9PHy_L58zTZvq_XyaZMpRooxI7IuQPHamIrrGrgsCm1iTFMwUGUFTGlOSqZJA6ohtORqoat8kUNBgSwqwubobvLde_d1iDHFzh28jS8FZWWep1LKSJGJUt6F4E0j9r4bpD8KAiKVK6ZyRSxXpHJFcqaTJkTWbo3_c_5f9AMFS3yg</addsrcrecordid><sourcetype>Aggregation Database</sourcetype><iscdi>true</iscdi><recordtype>article</recordtype><pqid>2375514327</pqid></control><display><type>article</type><title>Investigation of the hydrogen, halogen and pnicogen dimers by means of molecular face calculated by ab initio method</title><source>SpringerLink Journals - AutoHoldings</source><creator>Zhao, Dong-Xia ; Zhao, Jian ; Liu, Xiao-Nan ; Li, Jia-Ying ; Yang, Zhong-Zhi</creator><creatorcontrib>Zhao, Dong-Xia ; Zhao, Jian ; Liu, Xiao-Nan ; Li, Jia-Ying ; Yang, Zhong-Zhi</creatorcontrib><description>The noncovalent interactions, including hydrogen, halogen and pnicogen bonds, are widely known due to their significant role in both chemical reactions and biological phenomena. In this work, the potential acting on an electron in a molecule (PAEM) is introduced to present the strength and regioselectivity of noncovalent interaction. The PAEM height of noncovalent bonds,
D
pb
, can characterize the strength of the interaction, which has the linear relationships with noncovalent binding distances and binding energies. Here, we employ the molecular face theory (MFT) based on the PAEM to visualize reactive sites for the monomers in noncolvalent bond complexes. The electron density extremes on the molecular face (MF) regarded as the local reactivity descriptor are applied to exhibit the regioselectivity and preferred direction for monomers in hydrogen, halogen and pnicogen binding complexes, in good agreement with the chemical convention and ab initio calculation results. And the overlap distances of MF between dimers have been proposed and obtained to evaluate the strength of noncovalent interaction. The MFT provides a new way to demonstrate the regioselectivity and can be applied to larger and other type molecules in the future.</description><identifier>ISSN: 1432-881X</identifier><identifier>EISSN: 1432-2234</identifier><identifier>DOI: 10.1007/s00214-020-2568-1</identifier><language>eng</language><publisher>Berlin/Heidelberg: Springer Berlin Heidelberg</publisher><subject>Atomic/Molecular Structure and Spectra ; Bond strength ; Bonding strength ; Chemical Concepts from Theory and Computation ; Chemical reactions ; Chemistry ; Chemistry and Materials Science ; Dimers ; Electron density ; Hydrogen ; Inorganic Chemistry ; Mathematical analysis ; Monomers ; Organic Chemistry ; Physical Chemistry ; Regioselectivity ; Regular Article ; Theoretical and Computational Chemistry</subject><ispartof>Theoretical chemistry accounts, 2020-03, Vol.139 (3), Article 61</ispartof><rights>Springer-Verlag GmbH Germany, part of Springer Nature 2020</rights><rights>Springer-Verlag GmbH Germany, part of Springer Nature 2020.</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c316t-1ab60c4bee84db04a66de021e630c7803cd4173d1f0cf1274c9d8595062019813</citedby><cites>FETCH-LOGICAL-c316t-1ab60c4bee84db04a66de021e630c7803cd4173d1f0cf1274c9d8595062019813</cites><orcidid>0000-0002-3635-0606</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://link.springer.com/content/pdf/10.1007/s00214-020-2568-1$$EPDF$$P50$$Gspringer$$H</linktopdf><linktohtml>$$Uhttps://link.springer.com/10.1007/s00214-020-2568-1$$EHTML$$P50$$Gspringer$$H</linktohtml><link.rule.ids>314,777,781,27905,27906,41469,42538,51300</link.rule.ids></links><search><creatorcontrib>Zhao, Dong-Xia</creatorcontrib><creatorcontrib>Zhao, Jian</creatorcontrib><creatorcontrib>Liu, Xiao-Nan</creatorcontrib><creatorcontrib>Li, Jia-Ying</creatorcontrib><creatorcontrib>Yang, Zhong-Zhi</creatorcontrib><title>Investigation of the hydrogen, halogen and pnicogen dimers by means of molecular face calculated by ab initio method</title><title>Theoretical chemistry accounts</title><addtitle>Theor Chem Acc</addtitle><description>The noncovalent interactions, including hydrogen, halogen and pnicogen bonds, are widely known due to their significant role in both chemical reactions and biological phenomena. In this work, the potential acting on an electron in a molecule (PAEM) is introduced to present the strength and regioselectivity of noncovalent interaction. The PAEM height of noncovalent bonds,
D
pb
, can characterize the strength of the interaction, which has the linear relationships with noncovalent binding distances and binding energies. Here, we employ the molecular face theory (MFT) based on the PAEM to visualize reactive sites for the monomers in noncolvalent bond complexes. The electron density extremes on the molecular face (MF) regarded as the local reactivity descriptor are applied to exhibit the regioselectivity and preferred direction for monomers in hydrogen, halogen and pnicogen binding complexes, in good agreement with the chemical convention and ab initio calculation results. And the overlap distances of MF between dimers have been proposed and obtained to evaluate the strength of noncovalent interaction. The MFT provides a new way to demonstrate the regioselectivity and can be applied to larger and other type molecules in the future.</description><subject>Atomic/Molecular Structure and Spectra</subject><subject>Bond strength</subject><subject>Bonding strength</subject><subject>Chemical Concepts from Theory and Computation</subject><subject>Chemical reactions</subject><subject>Chemistry</subject><subject>Chemistry and Materials Science</subject><subject>Dimers</subject><subject>Electron density</subject><subject>Hydrogen</subject><subject>Inorganic Chemistry</subject><subject>Mathematical analysis</subject><subject>Monomers</subject><subject>Organic Chemistry</subject><subject>Physical Chemistry</subject><subject>Regioselectivity</subject><subject>Regular Article</subject><subject>Theoretical and Computational Chemistry</subject><issn>1432-881X</issn><issn>1432-2234</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2020</creationdate><recordtype>article</recordtype><recordid>eNp1kEtLAzEUhYMoWKs_wF3AraM3j3l0KUVroeBGwV3IJJnOlJmkJlOh_97EKbhyde-F75zLOQjdEnggAOVjAKCEZ0Aho3lRZeQMzQhnNKOU8fPTXlXk8xJdhbCDiNO8nKFxbb9NGLutHDtnsWvw2BrcHrV3W2PvcSv7tGBpNd7bTv0euhuMD7g-4sFIG5JqcL1Rh1563EhlsJJ9ukajEyVr3NkuPoj82Dp9jS4a2Qdzc5pz9PHy_L58zTZvq_XyaZMpRooxI7IuQPHamIrrGrgsCm1iTFMwUGUFTGlOSqZJA6ohtORqoat8kUNBgSwqwubobvLde_d1iDHFzh28jS8FZWWep1LKSJGJUt6F4E0j9r4bpD8KAiKVK6ZyRSxXpHJFcqaTJkTWbo3_c_5f9AMFS3yg</recordid><startdate>20200301</startdate><enddate>20200301</enddate><creator>Zhao, Dong-Xia</creator><creator>Zhao, Jian</creator><creator>Liu, Xiao-Nan</creator><creator>Li, Jia-Ying</creator><creator>Yang, Zhong-Zhi</creator><general>Springer Berlin Heidelberg</general><general>Springer Nature B.V</general><scope>AAYXX</scope><scope>CITATION</scope><orcidid>https://orcid.org/0000-0002-3635-0606</orcidid></search><sort><creationdate>20200301</creationdate><title>Investigation of the hydrogen, halogen and pnicogen dimers by means of molecular face calculated by ab initio method</title><author>Zhao, Dong-Xia ; Zhao, Jian ; Liu, Xiao-Nan ; Li, Jia-Ying ; Yang, Zhong-Zhi</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c316t-1ab60c4bee84db04a66de021e630c7803cd4173d1f0cf1274c9d8595062019813</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2020</creationdate><topic>Atomic/Molecular Structure and Spectra</topic><topic>Bond strength</topic><topic>Bonding strength</topic><topic>Chemical Concepts from Theory and Computation</topic><topic>Chemical reactions</topic><topic>Chemistry</topic><topic>Chemistry and Materials Science</topic><topic>Dimers</topic><topic>Electron density</topic><topic>Hydrogen</topic><topic>Inorganic Chemistry</topic><topic>Mathematical analysis</topic><topic>Monomers</topic><topic>Organic Chemistry</topic><topic>Physical Chemistry</topic><topic>Regioselectivity</topic><topic>Regular Article</topic><topic>Theoretical and Computational Chemistry</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Zhao, Dong-Xia</creatorcontrib><creatorcontrib>Zhao, Jian</creatorcontrib><creatorcontrib>Liu, Xiao-Nan</creatorcontrib><creatorcontrib>Li, Jia-Ying</creatorcontrib><creatorcontrib>Yang, Zhong-Zhi</creatorcontrib><collection>CrossRef</collection><jtitle>Theoretical chemistry accounts</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Zhao, Dong-Xia</au><au>Zhao, Jian</au><au>Liu, Xiao-Nan</au><au>Li, Jia-Ying</au><au>Yang, Zhong-Zhi</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Investigation of the hydrogen, halogen and pnicogen dimers by means of molecular face calculated by ab initio method</atitle><jtitle>Theoretical chemistry accounts</jtitle><stitle>Theor Chem Acc</stitle><date>2020-03-01</date><risdate>2020</risdate><volume>139</volume><issue>3</issue><artnum>61</artnum><issn>1432-881X</issn><eissn>1432-2234</eissn><abstract>The noncovalent interactions, including hydrogen, halogen and pnicogen bonds, are widely known due to their significant role in both chemical reactions and biological phenomena. In this work, the potential acting on an electron in a molecule (PAEM) is introduced to present the strength and regioselectivity of noncovalent interaction. The PAEM height of noncovalent bonds,
D
pb
, can characterize the strength of the interaction, which has the linear relationships with noncovalent binding distances and binding energies. Here, we employ the molecular face theory (MFT) based on the PAEM to visualize reactive sites for the monomers in noncolvalent bond complexes. The electron density extremes on the molecular face (MF) regarded as the local reactivity descriptor are applied to exhibit the regioselectivity and preferred direction for monomers in hydrogen, halogen and pnicogen binding complexes, in good agreement with the chemical convention and ab initio calculation results. And the overlap distances of MF between dimers have been proposed and obtained to evaluate the strength of noncovalent interaction. The MFT provides a new way to demonstrate the regioselectivity and can be applied to larger and other type molecules in the future.</abstract><cop>Berlin/Heidelberg</cop><pub>Springer Berlin Heidelberg</pub><doi>10.1007/s00214-020-2568-1</doi><orcidid>https://orcid.org/0000-0002-3635-0606</orcidid></addata></record> |
fulltext | fulltext |
identifier | ISSN: 1432-881X |
ispartof | Theoretical chemistry accounts, 2020-03, Vol.139 (3), Article 61 |
issn | 1432-881X 1432-2234 |
language | eng |
recordid | cdi_proquest_journals_2375514327 |
source | SpringerLink Journals - AutoHoldings |
subjects | Atomic/Molecular Structure and Spectra Bond strength Bonding strength Chemical Concepts from Theory and Computation Chemical reactions Chemistry Chemistry and Materials Science Dimers Electron density Hydrogen Inorganic Chemistry Mathematical analysis Monomers Organic Chemistry Physical Chemistry Regioselectivity Regular Article Theoretical and Computational Chemistry |
title | Investigation of the hydrogen, halogen and pnicogen dimers by means of molecular face calculated by ab initio method |
url | https://sfx.bib-bvb.de/sfx_tum?ctx_ver=Z39.88-2004&ctx_enc=info:ofi/enc:UTF-8&ctx_tim=2025-01-18T13%3A22%3A32IST&url_ver=Z39.88-2004&url_ctx_fmt=infofi/fmt:kev:mtx:ctx&rfr_id=info:sid/primo.exlibrisgroup.com:primo3-Article-proquest_cross&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rft.genre=article&rft.atitle=Investigation%20of%20the%20hydrogen,%20halogen%20and%20pnicogen%20dimers%20by%20means%20of%20molecular%20face%20calculated%20by%20ab%20initio%20method&rft.jtitle=Theoretical%20chemistry%20accounts&rft.au=Zhao,%20Dong-Xia&rft.date=2020-03-01&rft.volume=139&rft.issue=3&rft.artnum=61&rft.issn=1432-881X&rft.eissn=1432-2234&rft_id=info:doi/10.1007/s00214-020-2568-1&rft_dat=%3Cproquest_cross%3E2375514327%3C/proquest_cross%3E%3Curl%3E%3C/url%3E&disable_directlink=true&sfx.directlink=off&sfx.report_link=0&rft_id=info:oai/&rft_pqid=2375514327&rft_id=info:pmid/&rfr_iscdi=true |