Solution Structure and Dynamics of the Small Protein HVO_2922 from Haloferax volcanii

Past sequencing campaigns overlooked small proteins as they seemed to be irrelevant due to their small size. However, their occurrence is widespread, and there is growing evidence that these small proteins are in fact functionally very important in organisms found in all kingdoms of life. Within a g...

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Veröffentlicht in:Chembiochem : a European journal of chemical biology 2020-01, Vol.21 (1-2), p.149-156
Hauptverfasser: Kubatova, Nina, Jonker, Hendrik R. A., Saxena, Krishna, Richter, Christian, Vogel, Verena, Schreiber, Sandra, Marchfelder, Anita, Schwalbe, Harald
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container_issue 1-2
container_start_page 149
container_title Chembiochem : a European journal of chemical biology
container_volume 21
creator Kubatova, Nina
Jonker, Hendrik R. A.
Saxena, Krishna
Richter, Christian
Vogel, Verena
Schreiber, Sandra
Marchfelder, Anita
Schwalbe, Harald
description Past sequencing campaigns overlooked small proteins as they seemed to be irrelevant due to their small size. However, their occurrence is widespread, and there is growing evidence that these small proteins are in fact functionally very important in organisms found in all kingdoms of life. Within a global proteome analysis for small proteins of the archaeal model organism Haloferax volcanii, the HVO_2922 protein has been identified. It is differentially expressed in response to changes in iron and salt concentrations, thus suggesting that its expression is stress‐regulated. The protein is conserved among Haloarchaea and contains an uncharacterized domain of unknown function (DUF1508, UPF0339 family protein). We elucidated the NMR solution structure, which shows that the isolated protein forms a symmetrical dimer. The dimerization is found to be concentration‐dependent and essential for protein stability and most likely for its functionality, as mutagenesis at the dimer interface leads to a decrease in stability and protein aggregation. It takes two: We present a high‐resolution NMR solution structure of the HVO_2922 small protein from H. volcanii. The isolated protein forms a symmetrical dimer, which is stabilized by intramonomer electrostatic interactions. Dimerization is crucial for the protein stability and most probably for its functionality.
doi_str_mv 10.1002/cbic.201900085
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subjects Archaeal Proteins - chemistry
Archaeal Proteins - metabolism
Dimerization
Dimers
electrostatic interactions
Haloferax volcanii - chemistry
Haloferax volcanii - metabolism
Interface stability
Iron
Models, Molecular
Molecular structure
Mutagenesis
NMR
NMR spectroscopy
Nuclear magnetic resonance
Nuclear Magnetic Resonance, Biomolecular
Protein Conformation
Protein interaction
Protein Stability
Proteins
Proteomes
Solutions
structure elucidation
Thermodynamics
title Solution Structure and Dynamics of the Small Protein HVO_2922 from Haloferax volcanii
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