Optical Control of the GTP Affinity of K‐Ras(G12C) by a Photoswitchable Inhibitor
Photocontrol of protein activity is an emerging field in biomedicine. For optical control of a mutant small GTPase K‐Ras(G12C), we developed small‐molecule inhibitors with photoswitchable efficacy, where one configuration binds the target protein and exert different pharmacological effects upon ligh...
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Veröffentlicht in: | Chembiochem : a European journal of chemical biology 2019-12, Vol.20 (23), p.2916-2920 |
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creator | Ge, Zhihua Yang, Zhuojin Liang, Jingshi Dong, Duoling Zhu, Mingyan |
description | Photocontrol of protein activity is an emerging field in biomedicine. For optical control of a mutant small GTPase K‐Ras(G12C), we developed small‐molecule inhibitors with photoswitchable efficacy, where one configuration binds the target protein and exert different pharmacological effects upon light irradiation. The compound design was based on the structure feature of a previously identified allosteric pocket of K‐Ras(G12C) and the chemical structure of covalent inhibitors, and resulted in the synthesis and characterization of two representative azobenzene‐containing compounds. Nucleotide exchange assays demonstrated the different efficacy to control the GTP affinity by photoswitching of one potent compound PS‐C2, which would be a useful tool to probe the conformation of mutational K‐Ras. Our study demonstrated the feasibility of designing photoswitchable modulators from allosteric covalent inhibitor of small GTPases.
Photoswitchable inhibition: Compounds were designed by azologazation of an allosteric inhibitor of K‐Ras(G12C). They were able to modify the protein on mutation cysteine. The compounds were able to inhibit GTP binding of the K‐Ras with light control, which could be a useful tool for the study of K‐Ras proteins. |
doi_str_mv | 10.1002/cbic.201900342 |
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Photoswitchable inhibition: Compounds were designed by azologazation of an allosteric inhibitor of K‐Ras(G12C). They were able to modify the protein on mutation cysteine. The compounds were able to inhibit GTP binding of the K‐Ras with light control, which could be a useful tool for the study of K‐Ras proteins.</description><identifier>ISSN: 1439-4227</identifier><identifier>EISSN: 1439-7633</identifier><identifier>DOI: 10.1002/cbic.201900342</identifier><identifier>PMID: 31219673</identifier><language>eng</language><publisher>Germany: Wiley Subscription Services, Inc</publisher><subject>Affinity ; Allosteric properties ; allosterism ; azobenzenes ; covalent inhibitors ; Feasibility studies ; Guanosine triphosphatases ; Guanosine triphosphate ; Inhibitors ; Irradiation ; K-Ras(G12C) ; Light effects ; Light irradiation ; Modulators ; Nucleotides ; Optical control ; Organic chemistry ; photoswitches ; Proteins ; Radiation ; Ras protein</subject><ispartof>Chembiochem : a European journal of chemical biology, 2019-12, Vol.20 (23), p.2916-2920</ispartof><rights>2019 Wiley‐VCH Verlag GmbH & Co. KGaA, Weinheim</rights><rights>2019 Wiley-VCH Verlag GmbH & Co. KGaA, Weinheim.</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c3772-1849325891017b53ff8ccbb0c38c6de9d96fdd1057bbd12f1b629bd71bf40a143</citedby><cites>FETCH-LOGICAL-c3772-1849325891017b53ff8ccbb0c38c6de9d96fdd1057bbd12f1b629bd71bf40a143</cites><orcidid>0000-0003-0328-5470</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://onlinelibrary.wiley.com/doi/pdf/10.1002%2Fcbic.201900342$$EPDF$$P50$$Gwiley$$H</linktopdf><linktohtml>$$Uhttps://onlinelibrary.wiley.com/doi/full/10.1002%2Fcbic.201900342$$EHTML$$P50$$Gwiley$$H</linktohtml><link.rule.ids>314,780,784,1416,27923,27924,45573,45574</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/31219673$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Ge, Zhihua</creatorcontrib><creatorcontrib>Yang, Zhuojin</creatorcontrib><creatorcontrib>Liang, Jingshi</creatorcontrib><creatorcontrib>Dong, Duoling</creatorcontrib><creatorcontrib>Zhu, Mingyan</creatorcontrib><title>Optical Control of the GTP Affinity of K‐Ras(G12C) by a Photoswitchable Inhibitor</title><title>Chembiochem : a European journal of chemical biology</title><addtitle>Chembiochem</addtitle><description>Photocontrol of protein activity is an emerging field in biomedicine. For optical control of a mutant small GTPase K‐Ras(G12C), we developed small‐molecule inhibitors with photoswitchable efficacy, where one configuration binds the target protein and exert different pharmacological effects upon light irradiation. The compound design was based on the structure feature of a previously identified allosteric pocket of K‐Ras(G12C) and the chemical structure of covalent inhibitors, and resulted in the synthesis and characterization of two representative azobenzene‐containing compounds. Nucleotide exchange assays demonstrated the different efficacy to control the GTP affinity by photoswitching of one potent compound PS‐C2, which would be a useful tool to probe the conformation of mutational K‐Ras. Our study demonstrated the feasibility of designing photoswitchable modulators from allosteric covalent inhibitor of small GTPases.
Photoswitchable inhibition: Compounds were designed by azologazation of an allosteric inhibitor of K‐Ras(G12C). They were able to modify the protein on mutation cysteine. The compounds were able to inhibit GTP binding of the K‐Ras with light control, which could be a useful tool for the study of K‐Ras proteins.</description><subject>Affinity</subject><subject>Allosteric properties</subject><subject>allosterism</subject><subject>azobenzenes</subject><subject>covalent inhibitors</subject><subject>Feasibility studies</subject><subject>Guanosine triphosphatases</subject><subject>Guanosine triphosphate</subject><subject>Inhibitors</subject><subject>Irradiation</subject><subject>K-Ras(G12C)</subject><subject>Light effects</subject><subject>Light irradiation</subject><subject>Modulators</subject><subject>Nucleotides</subject><subject>Optical control</subject><subject>Organic chemistry</subject><subject>photoswitches</subject><subject>Proteins</subject><subject>Radiation</subject><subject>Ras protein</subject><issn>1439-4227</issn><issn>1439-7633</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2019</creationdate><recordtype>article</recordtype><recordid>eNqFkLFOwzAQhi0EoqWwMiJLLDCk-OwkjscSQalAagVljmInVlylcUlcVdl4BJ6RJyFVSxmZ7nT67j_dh9AlkCEQQu-UNGpICQhCmE-PUB98JjweMna8731KeQ-dNc2CECJCBqeox4CCCDnro7fpyhmVlji2lattia3GrsjxeD7DI61NZVy7nT1_f369ps3NGGh8i2WLUzwrrLPNxjhVpLLM8aQqjDTO1ufoRKdlk1_s6wC9Pz7M4yfvZTqexKMXTzHOqQeRLxgNIgEEuAyY1pFSUhLFIhVmuchEqLMMSMClzIBqkCEVMuMgtU_S7rcBut7lrmr7sc4blyzsuq66kwlltPs19EnQUcMdpWrbNHWuk1VtlmndJkCSrcNk6zA5OOwWrvaxa7nMswP-K60DxA7YmDJv_4lL4vtJ_Bf-A7_xfBc</recordid><startdate>20191202</startdate><enddate>20191202</enddate><creator>Ge, Zhihua</creator><creator>Yang, Zhuojin</creator><creator>Liang, Jingshi</creator><creator>Dong, Duoling</creator><creator>Zhu, Mingyan</creator><general>Wiley Subscription Services, Inc</general><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7QL</scope><scope>7QO</scope><scope>7TM</scope><scope>7U9</scope><scope>8FD</scope><scope>C1K</scope><scope>FR3</scope><scope>H94</scope><scope>K9.</scope><scope>M7N</scope><scope>P64</scope><orcidid>https://orcid.org/0000-0003-0328-5470</orcidid></search><sort><creationdate>20191202</creationdate><title>Optical Control of the GTP Affinity of K‐Ras(G12C) by a Photoswitchable Inhibitor</title><author>Ge, Zhihua ; Yang, Zhuojin ; Liang, Jingshi ; Dong, Duoling ; Zhu, Mingyan</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c3772-1849325891017b53ff8ccbb0c38c6de9d96fdd1057bbd12f1b629bd71bf40a143</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2019</creationdate><topic>Affinity</topic><topic>Allosteric properties</topic><topic>allosterism</topic><topic>azobenzenes</topic><topic>covalent inhibitors</topic><topic>Feasibility studies</topic><topic>Guanosine triphosphatases</topic><topic>Guanosine triphosphate</topic><topic>Inhibitors</topic><topic>Irradiation</topic><topic>K-Ras(G12C)</topic><topic>Light effects</topic><topic>Light irradiation</topic><topic>Modulators</topic><topic>Nucleotides</topic><topic>Optical control</topic><topic>Organic chemistry</topic><topic>photoswitches</topic><topic>Proteins</topic><topic>Radiation</topic><topic>Ras protein</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Ge, Zhihua</creatorcontrib><creatorcontrib>Yang, Zhuojin</creatorcontrib><creatorcontrib>Liang, Jingshi</creatorcontrib><creatorcontrib>Dong, Duoling</creatorcontrib><creatorcontrib>Zhu, Mingyan</creatorcontrib><collection>PubMed</collection><collection>CrossRef</collection><collection>Bacteriology Abstracts (Microbiology B)</collection><collection>Biotechnology Research Abstracts</collection><collection>Nucleic Acids Abstracts</collection><collection>Virology and AIDS Abstracts</collection><collection>Technology Research Database</collection><collection>Environmental Sciences and Pollution Management</collection><collection>Engineering Research Database</collection><collection>AIDS and Cancer Research Abstracts</collection><collection>ProQuest Health & Medical Complete (Alumni)</collection><collection>Algology Mycology and Protozoology Abstracts (Microbiology C)</collection><collection>Biotechnology and BioEngineering Abstracts</collection><jtitle>Chembiochem : a European journal of chemical biology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Ge, Zhihua</au><au>Yang, Zhuojin</au><au>Liang, Jingshi</au><au>Dong, Duoling</au><au>Zhu, Mingyan</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Optical Control of the GTP Affinity of K‐Ras(G12C) by a Photoswitchable Inhibitor</atitle><jtitle>Chembiochem : a European journal of chemical biology</jtitle><addtitle>Chembiochem</addtitle><date>2019-12-02</date><risdate>2019</risdate><volume>20</volume><issue>23</issue><spage>2916</spage><epage>2920</epage><pages>2916-2920</pages><issn>1439-4227</issn><eissn>1439-7633</eissn><abstract>Photocontrol of protein activity is an emerging field in biomedicine. For optical control of a mutant small GTPase K‐Ras(G12C), we developed small‐molecule inhibitors with photoswitchable efficacy, where one configuration binds the target protein and exert different pharmacological effects upon light irradiation. The compound design was based on the structure feature of a previously identified allosteric pocket of K‐Ras(G12C) and the chemical structure of covalent inhibitors, and resulted in the synthesis and characterization of two representative azobenzene‐containing compounds. Nucleotide exchange assays demonstrated the different efficacy to control the GTP affinity by photoswitching of one potent compound PS‐C2, which would be a useful tool to probe the conformation of mutational K‐Ras. Our study demonstrated the feasibility of designing photoswitchable modulators from allosteric covalent inhibitor of small GTPases.
Photoswitchable inhibition: Compounds were designed by azologazation of an allosteric inhibitor of K‐Ras(G12C). They were able to modify the protein on mutation cysteine. The compounds were able to inhibit GTP binding of the K‐Ras with light control, which could be a useful tool for the study of K‐Ras proteins.</abstract><cop>Germany</cop><pub>Wiley Subscription Services, Inc</pub><pmid>31219673</pmid><doi>10.1002/cbic.201900342</doi><tpages>5</tpages><orcidid>https://orcid.org/0000-0003-0328-5470</orcidid></addata></record> |
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subjects | Affinity Allosteric properties allosterism azobenzenes covalent inhibitors Feasibility studies Guanosine triphosphatases Guanosine triphosphate Inhibitors Irradiation K-Ras(G12C) Light effects Light irradiation Modulators Nucleotides Optical control Organic chemistry photoswitches Proteins Radiation Ras protein |
title | Optical Control of the GTP Affinity of K‐Ras(G12C) by a Photoswitchable Inhibitor |
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