Meta-analysis and multidisciplinary consensus statement: exomesequencing is a first-tier clinical diagnostic test for individuals withneurodevelopmental disorders
PurposeFor neurodevelopmental disorders (NDDs), etiological evaluation can be a diagnostic odyssey involving numerous genetic tests, underscoring the need to develop a streamlined algorithm maximizing molecular diagnostic yield for this clinical indication. Our objective was to compare the yield of...
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Veröffentlicht in: | Genetics in medicine 2019-11, Vol.21 (11), p.2413-2421 |
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creator | Srivastava Siddharth Love-Nichols, Jamie A Dies, Kira A Ledbetter, David H Martin, Christa L Chung, Wendy K Firth, Helen V Frazier, Thomas Hansen, Robin L Prock, Lisa Brunner, Han Ny, Hoang Scherer, Stephen W Sahin Mustafa Miller, David T |
description | PurposeFor neurodevelopmental disorders (NDDs), etiological evaluation can be a diagnostic odyssey involving numerous genetic tests, underscoring the need to develop a streamlined algorithm maximizing molecular diagnostic yield for this clinical indication. Our objective was to compare the yield of exome sequencing (ES) with that of chromosomal microarray (CMA), the current first-tier test for NDDs.MethodsWe performed a PubMed scoping review and meta-analysis investigating the diagnostic yield of ES for NDDs as the basis of a consensus development conference. We defined NDD as global developmental delay, intellectual disability, and/or autism spectrum disorder. The consensus development conference included input from genetics professionals, pediatric neurologists, and developmental behavioral pediatricians.ResultsAfter applying strict inclusion/exclusion criteria, we identified 30 articles with data on molecular diagnostic yield in individuals with isolated NDD, or NDD plus associated conditions (such as Rett-like features). Yield of ES was 36% overall, 31% for isolated NDD, and 53% for the NDD plus associated conditions. ES yield for NDDs is markedly greater than previous studies of CMA (15–20%).ConclusionOur review demonstrates that ES consistently outperforms CMA for evaluation of unexplained NDDs. We propose a diagnostic algorithm placing ES at the beginning of the evaluation of unexplained NDDs. |
doi_str_mv | 10.1038/s41436-019-0554-6 |
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Our objective was to compare the yield of exome sequencing (ES) with that of chromosomal microarray (CMA), the current first-tier test for NDDs.MethodsWe performed a PubMed scoping review and meta-analysis investigating the diagnostic yield of ES for NDDs as the basis of a consensus development conference. We defined NDD as global developmental delay, intellectual disability, and/or autism spectrum disorder. The consensus development conference included input from genetics professionals, pediatric neurologists, and developmental behavioral pediatricians.ResultsAfter applying strict inclusion/exclusion criteria, we identified 30 articles with data on molecular diagnostic yield in individuals with isolated NDD, or NDD plus associated conditions (such as Rett-like features). Yield of ES was 36% overall, 31% for isolated NDD, and 53% for the NDD plus associated conditions. ES yield for NDDs is markedly greater than previous studies of CMA (15–20%).ConclusionOur review demonstrates that ES consistently outperforms CMA for evaluation of unexplained NDDs. We propose a diagnostic algorithm placing ES at the beginning of the evaluation of unexplained NDDs.</description><identifier>ISSN: 1098-3600</identifier><identifier>EISSN: 1530-0366</identifier><identifier>DOI: 10.1038/s41436-019-0554-6</identifier><language>eng</language><publisher>Bethesda: Elsevier Limited</publisher><subject>Meta-analysis ; Neurodevelopmental disorders</subject><ispartof>Genetics in medicine, 2019-11, Vol.21 (11), p.2413-2421</ispartof><rights>The Author(s) 2019. This work is published under http://creativecommons.org/licenses/by-nc-nd/4.0/ (the “License”). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License.</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktohtml>$$Uhttps://www.proquest.com/docview/2312259740?pq-origsite=primo$$EHTML$$P50$$Gproquest$$H</linktohtml><link.rule.ids>314,777,781,27905,27906,64364,64368,72218</link.rule.ids></links><search><creatorcontrib>Srivastava Siddharth</creatorcontrib><creatorcontrib>Love-Nichols, Jamie A</creatorcontrib><creatorcontrib>Dies, Kira A</creatorcontrib><creatorcontrib>Ledbetter, David H</creatorcontrib><creatorcontrib>Martin, Christa L</creatorcontrib><creatorcontrib>Chung, Wendy K</creatorcontrib><creatorcontrib>Firth, Helen V</creatorcontrib><creatorcontrib>Frazier, Thomas</creatorcontrib><creatorcontrib>Hansen, Robin L</creatorcontrib><creatorcontrib>Prock, Lisa</creatorcontrib><creatorcontrib>Brunner, Han</creatorcontrib><creatorcontrib>Ny, Hoang</creatorcontrib><creatorcontrib>Scherer, Stephen W</creatorcontrib><creatorcontrib>Sahin Mustafa</creatorcontrib><creatorcontrib>Miller, David T</creatorcontrib><title>Meta-analysis and multidisciplinary consensus statement: exomesequencing is a first-tier clinical diagnostic test for individuals withneurodevelopmental disorders</title><title>Genetics in medicine</title><description>PurposeFor neurodevelopmental disorders (NDDs), etiological evaluation can be a diagnostic odyssey involving numerous genetic tests, underscoring the need to develop a streamlined algorithm maximizing molecular diagnostic yield for this clinical indication. Our objective was to compare the yield of exome sequencing (ES) with that of chromosomal microarray (CMA), the current first-tier test for NDDs.MethodsWe performed a PubMed scoping review and meta-analysis investigating the diagnostic yield of ES for NDDs as the basis of a consensus development conference. We defined NDD as global developmental delay, intellectual disability, and/or autism spectrum disorder. The consensus development conference included input from genetics professionals, pediatric neurologists, and developmental behavioral pediatricians.ResultsAfter applying strict inclusion/exclusion criteria, we identified 30 articles with data on molecular diagnostic yield in individuals with isolated NDD, or NDD plus associated conditions (such as Rett-like features). Yield of ES was 36% overall, 31% for isolated NDD, and 53% for the NDD plus associated conditions. ES yield for NDDs is markedly greater than previous studies of CMA (15–20%).ConclusionOur review demonstrates that ES consistently outperforms CMA for evaluation of unexplained NDDs. 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Love-Nichols, Jamie A ; Dies, Kira A ; Ledbetter, David H ; Martin, Christa L ; Chung, Wendy K ; Firth, Helen V ; Frazier, Thomas ; Hansen, Robin L ; Prock, Lisa ; Brunner, Han ; Ny, Hoang ; Scherer, Stephen W ; Sahin Mustafa ; Miller, David T</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-proquest_journals_23122597403</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2019</creationdate><topic>Meta-analysis</topic><topic>Neurodevelopmental disorders</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Srivastava Siddharth</creatorcontrib><creatorcontrib>Love-Nichols, Jamie A</creatorcontrib><creatorcontrib>Dies, Kira A</creatorcontrib><creatorcontrib>Ledbetter, David H</creatorcontrib><creatorcontrib>Martin, Christa L</creatorcontrib><creatorcontrib>Chung, Wendy K</creatorcontrib><creatorcontrib>Firth, Helen V</creatorcontrib><creatorcontrib>Frazier, Thomas</creatorcontrib><creatorcontrib>Hansen, Robin L</creatorcontrib><creatorcontrib>Prock, Lisa</creatorcontrib><creatorcontrib>Brunner, Han</creatorcontrib><creatorcontrib>Ny, Hoang</creatorcontrib><creatorcontrib>Scherer, Stephen W</creatorcontrib><creatorcontrib>Sahin Mustafa</creatorcontrib><creatorcontrib>Miller, David T</creatorcontrib><collection>ProQuest Central (Corporate)</collection><collection>Health & Medical Collection</collection><collection>ProQuest Central (purchase pre-March 2016)</collection><collection>Medical Database (Alumni Edition)</collection><collection>Hospital Premium Collection</collection><collection>Hospital Premium Collection (Alumni Edition)</collection><collection>ProQuest Central (Alumni) (purchase pre-March 2016)</collection><collection>ProQuest Central (Alumni Edition)</collection><collection>ProQuest Central UK/Ireland</collection><collection>ProQuest Central</collection><collection>ProQuest One Community College</collection><collection>Health Research Premium Collection</collection><collection>Health Research Premium Collection (Alumni)</collection><collection>ProQuest Health & Medical Complete (Alumni)</collection><collection>Health & Medical Collection (Alumni Edition)</collection><collection>Medical Database</collection><collection>ProQuest One Academic Eastern Edition (DO NOT USE)</collection><collection>ProQuest One Academic</collection><collection>ProQuest One Academic UKI Edition</collection><collection>ProQuest Central China</collection><jtitle>Genetics in medicine</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Srivastava Siddharth</au><au>Love-Nichols, Jamie A</au><au>Dies, Kira A</au><au>Ledbetter, David H</au><au>Martin, Christa L</au><au>Chung, Wendy K</au><au>Firth, Helen V</au><au>Frazier, Thomas</au><au>Hansen, Robin L</au><au>Prock, Lisa</au><au>Brunner, Han</au><au>Ny, Hoang</au><au>Scherer, Stephen W</au><au>Sahin Mustafa</au><au>Miller, David T</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Meta-analysis and multidisciplinary consensus statement: exomesequencing is a first-tier clinical diagnostic test for individuals withneurodevelopmental disorders</atitle><jtitle>Genetics in medicine</jtitle><date>2019-11-01</date><risdate>2019</risdate><volume>21</volume><issue>11</issue><spage>2413</spage><epage>2421</epage><pages>2413-2421</pages><issn>1098-3600</issn><eissn>1530-0366</eissn><abstract>PurposeFor neurodevelopmental disorders (NDDs), etiological evaluation can be a diagnostic odyssey involving numerous genetic tests, underscoring the need to develop a streamlined algorithm maximizing molecular diagnostic yield for this clinical indication. Our objective was to compare the yield of exome sequencing (ES) with that of chromosomal microarray (CMA), the current first-tier test for NDDs.MethodsWe performed a PubMed scoping review and meta-analysis investigating the diagnostic yield of ES for NDDs as the basis of a consensus development conference. We defined NDD as global developmental delay, intellectual disability, and/or autism spectrum disorder. The consensus development conference included input from genetics professionals, pediatric neurologists, and developmental behavioral pediatricians.ResultsAfter applying strict inclusion/exclusion criteria, we identified 30 articles with data on molecular diagnostic yield in individuals with isolated NDD, or NDD plus associated conditions (such as Rett-like features). Yield of ES was 36% overall, 31% for isolated NDD, and 53% for the NDD plus associated conditions. ES yield for NDDs is markedly greater than previous studies of CMA (15–20%).ConclusionOur review demonstrates that ES consistently outperforms CMA for evaluation of unexplained NDDs. We propose a diagnostic algorithm placing ES at the beginning of the evaluation of unexplained NDDs.</abstract><cop>Bethesda</cop><pub>Elsevier Limited</pub><doi>10.1038/s41436-019-0554-6</doi></addata></record> |
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title | Meta-analysis and multidisciplinary consensus statement: exomesequencing is a first-tier clinical diagnostic test for individuals withneurodevelopmental disorders |
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