Whole gene transcriptomic analysis of PCB/biphenyl degrading Rhodococcus jostii RHA1

This study gives the first picture of whole RNA-Sequencing analysis of a PCB-degrading microbe, Rhodococcus jostii RHA1. Genes that were highly expressed in biphenyl-grown cells, compared with pyruvate-grown cells, were chosen based on the Reads Per Kilobase Million (RPKM) value and were summarized...

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Veröffentlicht in:	Journal of general and applied microbiology 2019, Vol.65(4), pp.173-179
Hauptverfasser:	Sha'arani, Shazwana, Hara, Hirofumi, Araie, Hiroya, Suzuki, Iwane, Megat Johari Megat Mohd Noor, Akhir, Fazrena Nadia MD, Othman, Nor'azizi, Zakaria, Zuriati
Format:	Artikel
Sprache:	eng
Schlagworte:	Annotations Biphenyl Biphenyl Compounds biphenyl degradation Chromosome Mapping Cloning, Molecular Degradation Deoxyribonucleic acid DNA DNA microarrays Gene Expression Gene sequencing Genes Genes, Bacterial Genomes Nucleotide sequence PCB PCB compounds polychlorinated biphenyl (PCB) Polychlorinated biphenyls Polychlorinated Biphenyls - metabolism Proteins Pyruvates Pyruvic acid RHA1 Rhodococcus Rhodococcus - genetics Rhodococcus - metabolism Rhodococcus jostii Ribonucleic acid RNA RNA-Seq Transcriptome
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