Expression profiles of Br MYB transcription factors related to glucosinolate biosynthesis and stress response in eight subspecies of Brassica rapa
Brassica rapa is a polyploid species with phenotypically diverse cultivated subspecies. Glucosinolates ( GSL s) are secondary metabolites that contribute to anticarcinogenic activity and plant defense in Brassicaceae. Previously, complete coding sequences of 13 Br MYB transcription factors ( TF s) r...
Gespeichert in:
Veröffentlicht in: | FEBS open bio 2017-11, Vol.7 (11), p.1646-1659 |
---|---|
Hauptverfasser: | , , , |
Format: | Artikel |
Sprache: | eng |
Schlagworte: | |
Online-Zugang: | Volltext |
Tags: |
Tag hinzufügen
Keine Tags, Fügen Sie den ersten Tag hinzu!
|
container_end_page | 1659 |
---|---|
container_issue | 11 |
container_start_page | 1646 |
container_title | FEBS open bio |
container_volume | 7 |
creator | Seo, Mi‐Suk Jin, Mina Sohn, Seong‐Han Kim, Jung Sun |
description | Brassica rapa
is a polyploid species with phenotypically diverse cultivated subspecies. Glucosinolates (
GSL
s) are secondary metabolites that contribute to anticarcinogenic activity and plant defense in Brassicaceae. Previously, complete coding sequences of 13
Br
MYB
transcription factors (
TF
s) related to
GSL
biosynthesis were identified in the
B. rapa
genome. In the present study, we investigated
GSL
content and expression levels of these
Br
MYB
TF
s in 38 accessions belonging to eight subspecies of
B. rapa
. Twelve identified
GSL
s were detected and were classified into three chemical groups based on patterns of
GSL
content and expression profiles of the
Br
MYB
TF
s.
GSL
content and
Br
MYB
TF
expression levels differed among genotypes, including
B. rapa
subspecies
pekinensis
,
chinensis
and
rapa
.
Br
MYB
28.3
,
Br
MYB
51.1
and
Br
MYB
122.2
positively regulated
GSL
content in 38 accessions. Furthermore, expression levels of
Br
MYB
28
s and
Br
MYB
34.3
increased under most abiotic and biotic stress treatments. The three
Br
MYB
51
paralogs also showed drastically increased expression levels after infection with
Pectobacterium carotovorum
. The results of the present study improve our understanding of the functional diversity of these 13
Br
MYB
TF
s during the evolution of polyploid
B. rapa
. |
doi_str_mv | 10.1002/2211-5463.12231 |
format | Article |
fullrecord | <record><control><sourceid>proquest_cross</sourceid><recordid>TN_cdi_proquest_journals_2288062098</recordid><sourceformat>XML</sourceformat><sourcesystem>PC</sourcesystem><sourcerecordid>2288062098</sourcerecordid><originalsourceid>FETCH-LOGICAL-c1148-a545c82d8eca685c997c1d33ec993c05c7ab3e97042880b9c1ce8222ade065f53</originalsourceid><addsrcrecordid>eNpNUMtOwzAQtBBIVNAzV0uc09rOo86RVuUhFXGBAyfLcTatq2AHryPR3-CLSSgg9rKr0czO7hByxdmMMybmQnCe5FmRzrgQKT8hkz_k9N98TqaIezZUwXjB2IR8rj-6AIjWO9oF39gWkPqGLgN9fF3SGLRDE2wXR0KjTfQBaYBWR6hp9HTb9sajdX5EaGU9HlzcAVqk2tUU47h8EGDnHQK1joLd7iLFvsIOjP1108MJRtOgO31JzhrdIkx_-gV5uV0_r-6TzdPdw-pmkxjOM5noPMuNFLUEowuZm7JcGF6nKQxTalhuFrpKoVywTEjJqtJwA1IIoWtgRd7k6QW5Pu4d_n7vAaPa-z64wVKJUVIIVsqBNT-yTPCIARrVBfumw0Fxpsbs1ZiuGtNV39mnX5CgeO8</addsrcrecordid><sourcetype>Aggregation Database</sourcetype><iscdi>true</iscdi><recordtype>article</recordtype><pqid>2288062098</pqid></control><display><type>article</type><title>Expression profiles of Br MYB transcription factors related to glucosinolate biosynthesis and stress response in eight subspecies of Brassica rapa</title><source>Open Access: Wiley-Blackwell Open Access Journals</source><source>Wiley Online Library All Journals</source><source>PubMed Central</source><source>DOAJ: Directory of Open Access Journals</source><source>EZB Electronic Journals Library</source><creator>Seo, Mi‐Suk ; Jin, Mina ; Sohn, Seong‐Han ; Kim, Jung Sun</creator><creatorcontrib>Seo, Mi‐Suk ; Jin, Mina ; Sohn, Seong‐Han ; Kim, Jung Sun</creatorcontrib><description>Brassica rapa
is a polyploid species with phenotypically diverse cultivated subspecies. Glucosinolates (
GSL
s) are secondary metabolites that contribute to anticarcinogenic activity and plant defense in Brassicaceae. Previously, complete coding sequences of 13
Br
MYB
transcription factors (
TF
s) related to
GSL
biosynthesis were identified in the
B. rapa
genome. In the present study, we investigated
GSL
content and expression levels of these
Br
MYB
TF
s in 38 accessions belonging to eight subspecies of
B. rapa
. Twelve identified
GSL
s were detected and were classified into three chemical groups based on patterns of
GSL
content and expression profiles of the
Br
MYB
TF
s.
GSL
content and
Br
MYB
TF
expression levels differed among genotypes, including
B. rapa
subspecies
pekinensis
,
chinensis
and
rapa
.
Br
MYB
28.3
,
Br
MYB
51.1
and
Br
MYB
122.2
positively regulated
GSL
content in 38 accessions. Furthermore, expression levels of
Br
MYB
28
s and
Br
MYB
34.3
increased under most abiotic and biotic stress treatments. The three
Br
MYB
51
paralogs also showed drastically increased expression levels after infection with
Pectobacterium carotovorum
. The results of the present study improve our understanding of the functional diversity of these 13
Br
MYB
TF
s during the evolution of polyploid
B. rapa
.</description><identifier>ISSN: 2211-5463</identifier><identifier>EISSN: 2211-5463</identifier><identifier>DOI: 10.1002/2211-5463.12231</identifier><language>eng</language><publisher>Amsterdam: John Wiley & Sons, Inc</publisher><subject>Amino acids ; Biosynthesis ; Brassica rapa ; Defense mechanisms ; Evolution ; Flowers & plants ; Gene expression ; Genomes ; Genotypes ; Glucosinolates ; Metabolites ; Morphology ; Polyploidy ; Rural development ; Secondary metabolites ; Seeds ; Studies ; Transcription factors</subject><ispartof>FEBS open bio, 2017-11, Vol.7 (11), p.1646-1659</ispartof><rights>2017. This work is published under http://creativecommons.org/licenses/by/4.0/ (the “License”). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License.</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c1148-a545c82d8eca685c997c1d33ec993c05c7ab3e97042880b9c1ce8222ade065f53</citedby><cites>FETCH-LOGICAL-c1148-a545c82d8eca685c997c1d33ec993c05c7ab3e97042880b9c1ce8222ade065f53</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,776,780,860,27903,27904</link.rule.ids></links><search><creatorcontrib>Seo, Mi‐Suk</creatorcontrib><creatorcontrib>Jin, Mina</creatorcontrib><creatorcontrib>Sohn, Seong‐Han</creatorcontrib><creatorcontrib>Kim, Jung Sun</creatorcontrib><title>Expression profiles of Br MYB transcription factors related to glucosinolate biosynthesis and stress response in eight subspecies of Brassica rapa</title><title>FEBS open bio</title><description>Brassica rapa
is a polyploid species with phenotypically diverse cultivated subspecies. Glucosinolates (
GSL
s) are secondary metabolites that contribute to anticarcinogenic activity and plant defense in Brassicaceae. Previously, complete coding sequences of 13
Br
MYB
transcription factors (
TF
s) related to
GSL
biosynthesis were identified in the
B. rapa
genome. In the present study, we investigated
GSL
content and expression levels of these
Br
MYB
TF
s in 38 accessions belonging to eight subspecies of
B. rapa
. Twelve identified
GSL
s were detected and were classified into three chemical groups based on patterns of
GSL
content and expression profiles of the
Br
MYB
TF
s.
GSL
content and
Br
MYB
TF
expression levels differed among genotypes, including
B. rapa
subspecies
pekinensis
,
chinensis
and
rapa
.
Br
MYB
28.3
,
Br
MYB
51.1
and
Br
MYB
122.2
positively regulated
GSL
content in 38 accessions. Furthermore, expression levels of
Br
MYB
28
s and
Br
MYB
34.3
increased under most abiotic and biotic stress treatments. The three
Br
MYB
51
paralogs also showed drastically increased expression levels after infection with
Pectobacterium carotovorum
. The results of the present study improve our understanding of the functional diversity of these 13
Br
MYB
TF
s during the evolution of polyploid
B. rapa
.</description><subject>Amino acids</subject><subject>Biosynthesis</subject><subject>Brassica rapa</subject><subject>Defense mechanisms</subject><subject>Evolution</subject><subject>Flowers & plants</subject><subject>Gene expression</subject><subject>Genomes</subject><subject>Genotypes</subject><subject>Glucosinolates</subject><subject>Metabolites</subject><subject>Morphology</subject><subject>Polyploidy</subject><subject>Rural development</subject><subject>Secondary metabolites</subject><subject>Seeds</subject><subject>Studies</subject><subject>Transcription factors</subject><issn>2211-5463</issn><issn>2211-5463</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2017</creationdate><recordtype>article</recordtype><sourceid>ABUWG</sourceid><sourceid>AFKRA</sourceid><sourceid>AZQEC</sourceid><sourceid>BENPR</sourceid><sourceid>CCPQU</sourceid><sourceid>DWQXO</sourceid><sourceid>GNUQQ</sourceid><recordid>eNpNUMtOwzAQtBBIVNAzV0uc09rOo86RVuUhFXGBAyfLcTatq2AHryPR3-CLSSgg9rKr0czO7hByxdmMMybmQnCe5FmRzrgQKT8hkz_k9N98TqaIezZUwXjB2IR8rj-6AIjWO9oF39gWkPqGLgN9fF3SGLRDE2wXR0KjTfQBaYBWR6hp9HTb9sajdX5EaGU9HlzcAVqk2tUU47h8EGDnHQK1joLd7iLFvsIOjP1108MJRtOgO31JzhrdIkx_-gV5uV0_r-6TzdPdw-pmkxjOM5noPMuNFLUEowuZm7JcGF6nKQxTalhuFrpKoVywTEjJqtJwA1IIoWtgRd7k6QW5Pu4d_n7vAaPa-z64wVKJUVIIVsqBNT-yTPCIARrVBfumw0Fxpsbs1ZiuGtNV39mnX5CgeO8</recordid><startdate>201711</startdate><enddate>201711</enddate><creator>Seo, Mi‐Suk</creator><creator>Jin, Mina</creator><creator>Sohn, Seong‐Han</creator><creator>Kim, Jung Sun</creator><general>John Wiley & Sons, Inc</general><scope>AAYXX</scope><scope>CITATION</scope><scope>8FE</scope><scope>8FH</scope><scope>ABUWG</scope><scope>AFKRA</scope><scope>AZQEC</scope><scope>BBNVY</scope><scope>BENPR</scope><scope>BHPHI</scope><scope>CCPQU</scope><scope>DWQXO</scope><scope>GNUQQ</scope><scope>HCIFZ</scope><scope>LK8</scope><scope>M7P</scope><scope>PIMPY</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>PRINS</scope></search><sort><creationdate>201711</creationdate><title>Expression profiles of Br MYB transcription factors related to glucosinolate biosynthesis and stress response in eight subspecies of Brassica rapa</title><author>Seo, Mi‐Suk ; Jin, Mina ; Sohn, Seong‐Han ; Kim, Jung Sun</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c1148-a545c82d8eca685c997c1d33ec993c05c7ab3e97042880b9c1ce8222ade065f53</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2017</creationdate><topic>Amino acids</topic><topic>Biosynthesis</topic><topic>Brassica rapa</topic><topic>Defense mechanisms</topic><topic>Evolution</topic><topic>Flowers & plants</topic><topic>Gene expression</topic><topic>Genomes</topic><topic>Genotypes</topic><topic>Glucosinolates</topic><topic>Metabolites</topic><topic>Morphology</topic><topic>Polyploidy</topic><topic>Rural development</topic><topic>Secondary metabolites</topic><topic>Seeds</topic><topic>Studies</topic><topic>Transcription factors</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Seo, Mi‐Suk</creatorcontrib><creatorcontrib>Jin, Mina</creatorcontrib><creatorcontrib>Sohn, Seong‐Han</creatorcontrib><creatorcontrib>Kim, Jung Sun</creatorcontrib><collection>CrossRef</collection><collection>ProQuest SciTech Collection</collection><collection>ProQuest Natural Science Collection</collection><collection>ProQuest Central (Alumni)</collection><collection>ProQuest Central UK/Ireland</collection><collection>ProQuest Central Essentials</collection><collection>Biological Science Collection</collection><collection>ProQuest Databases</collection><collection>ProQuest Natural Science Collection</collection><collection>ProQuest One Community College</collection><collection>ProQuest Central</collection><collection>ProQuest Central Student</collection><collection>SciTech Premium Collection</collection><collection>Biological Sciences</collection><collection>ProQuest Biological Science Journals</collection><collection>Publicly Available Content Database</collection><collection>ProQuest One Academic Eastern Edition (DO NOT USE)</collection><collection>ProQuest One Academic</collection><collection>ProQuest One Academic UKI Edition</collection><collection>ProQuest Central China</collection><jtitle>FEBS open bio</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Seo, Mi‐Suk</au><au>Jin, Mina</au><au>Sohn, Seong‐Han</au><au>Kim, Jung Sun</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Expression profiles of Br MYB transcription factors related to glucosinolate biosynthesis and stress response in eight subspecies of Brassica rapa</atitle><jtitle>FEBS open bio</jtitle><date>2017-11</date><risdate>2017</risdate><volume>7</volume><issue>11</issue><spage>1646</spage><epage>1659</epage><pages>1646-1659</pages><issn>2211-5463</issn><eissn>2211-5463</eissn><abstract>Brassica rapa
is a polyploid species with phenotypically diverse cultivated subspecies. Glucosinolates (
GSL
s) are secondary metabolites that contribute to anticarcinogenic activity and plant defense in Brassicaceae. Previously, complete coding sequences of 13
Br
MYB
transcription factors (
TF
s) related to
GSL
biosynthesis were identified in the
B. rapa
genome. In the present study, we investigated
GSL
content and expression levels of these
Br
MYB
TF
s in 38 accessions belonging to eight subspecies of
B. rapa
. Twelve identified
GSL
s were detected and were classified into three chemical groups based on patterns of
GSL
content and expression profiles of the
Br
MYB
TF
s.
GSL
content and
Br
MYB
TF
expression levels differed among genotypes, including
B. rapa
subspecies
pekinensis
,
chinensis
and
rapa
.
Br
MYB
28.3
,
Br
MYB
51.1
and
Br
MYB
122.2
positively regulated
GSL
content in 38 accessions. Furthermore, expression levels of
Br
MYB
28
s and
Br
MYB
34.3
increased under most abiotic and biotic stress treatments. The three
Br
MYB
51
paralogs also showed drastically increased expression levels after infection with
Pectobacterium carotovorum
. The results of the present study improve our understanding of the functional diversity of these 13
Br
MYB
TF
s during the evolution of polyploid
B. rapa
.</abstract><cop>Amsterdam</cop><pub>John Wiley & Sons, Inc</pub><doi>10.1002/2211-5463.12231</doi><tpages>14</tpages><oa>free_for_read</oa></addata></record> |
fulltext | fulltext |
identifier | ISSN: 2211-5463 |
ispartof | FEBS open bio, 2017-11, Vol.7 (11), p.1646-1659 |
issn | 2211-5463 2211-5463 |
language | eng |
recordid | cdi_proquest_journals_2288062098 |
source | Open Access: Wiley-Blackwell Open Access Journals; Wiley Online Library All Journals; PubMed Central; DOAJ: Directory of Open Access Journals; EZB Electronic Journals Library |
subjects | Amino acids Biosynthesis Brassica rapa Defense mechanisms Evolution Flowers & plants Gene expression Genomes Genotypes Glucosinolates Metabolites Morphology Polyploidy Rural development Secondary metabolites Seeds Studies Transcription factors |
title | Expression profiles of Br MYB transcription factors related to glucosinolate biosynthesis and stress response in eight subspecies of Brassica rapa |
url | https://sfx.bib-bvb.de/sfx_tum?ctx_ver=Z39.88-2004&ctx_enc=info:ofi/enc:UTF-8&ctx_tim=2025-01-24T22%3A17%3A23IST&url_ver=Z39.88-2004&url_ctx_fmt=infofi/fmt:kev:mtx:ctx&rfr_id=info:sid/primo.exlibrisgroup.com:primo3-Article-proquest_cross&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rft.genre=article&rft.atitle=Expression%20profiles%20of%20Br%20MYB%20transcription%20factors%20related%20to%20glucosinolate%20biosynthesis%20and%20stress%20response%20in%20eight%20subspecies%20of%20Brassica%20rapa&rft.jtitle=FEBS%20open%20bio&rft.au=Seo,%20Mi%E2%80%90Suk&rft.date=2017-11&rft.volume=7&rft.issue=11&rft.spage=1646&rft.epage=1659&rft.pages=1646-1659&rft.issn=2211-5463&rft.eissn=2211-5463&rft_id=info:doi/10.1002/2211-5463.12231&rft_dat=%3Cproquest_cross%3E2288062098%3C/proquest_cross%3E%3Curl%3E%3C/url%3E&disable_directlink=true&sfx.directlink=off&sfx.report_link=0&rft_id=info:oai/&rft_pqid=2288062098&rft_id=info:pmid/&rfr_iscdi=true |