Potential role of TP63 in apical periodontitis development

Aim To investigate the expression of TP63 in apical periodontitis (AP) tissues and the association of single nucleotide polymorphisms (SNPs) in the TP63 gene with AP using a case‐control dataset. Methodology Expression of TP63 in human AP lesions (apical abscess, radicular cyst, periapical granuloma...

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Veröffentlicht in:International endodontic journal 2019-09, Vol.52 (9), p.1344-1353
Hauptverfasser: Souza, L. C., Crozeta, B. M., Guajardo, L., Brasil da Costa, F. H., Sousa‐Neto, M. D., Letra, A., Silva, R. M.
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container_end_page 1353
container_issue 9
container_start_page 1344
container_title International endodontic journal
container_volume 52
creator Souza, L. C.
Crozeta, B. M.
Guajardo, L.
Brasil da Costa, F. H.
Sousa‐Neto, M. D.
Letra, A.
Silva, R. M.
description Aim To investigate the expression of TP63 in apical periodontitis (AP) tissues and the association of single nucleotide polymorphisms (SNPs) in the TP63 gene with AP using a case‐control dataset. Methodology Expression of TP63 in human AP lesions (apical abscess, radicular cyst, periapical granuloma) was evaluated using immunohistochemistry. A case‐control association study was performed to assess the association of TP63 polymorphisms in individuals having AP with or without associated pain. Cases were defined as subjects with deep caries and AP (n = 151) and subjects with symptomatic apical periodontitis or acute apical abscess (n = 124). Subjects without AP (n = 169) and asymptomatic (n = 196) were used as controls, respectively. Saliva samples were collected as source of genomic DNA. Twelve SNPs in the TP63 gene were selected for genotyping using Taqman chemistry in real‐time PCR. Data analysis was performed using PLINK software. The Bonferroni method was applied to correct for multiple testing; α ≤ 0.004 indicates significant differences between groups. Results TP63 expression was evident in apical abscesses and radicular cysts, while weaker expression was observed in periapical granulomas. Positive expression was observed in mononuclear cells in the granulation tissues of all AP lesions. Regarding the presence of AP, a trend for allelic association was observed for rs16864812 and rs9810322 (P = 0.04) and rs9810322 genotypes were also nominally associated with AP under a dominant model (P = 0.04). When considering the presence of periapical pain, a trend for allelic and genotypic association was observed for rs10155037 (P = 0.03). Haplotypes were also associated with AP and periapical pain (P ≤ 0.05). Conclusions Apical periodontitis is a complex multifactorial condition and it is likely that multiple genes and environmental effects may influence its susceptibility, progression or both. TP63 variants may play a role in AP pathogenesis and susceptibility, individually or interactively with other genes. Additional studies in other populations and functional studies are needed to improve understanding of the role of TP63 in AP.
doi_str_mv 10.1111/iej.13133
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C. ; Crozeta, B. M. ; Guajardo, L. ; Brasil da Costa, F. H. ; Sousa‐Neto, M. D. ; Letra, A. ; Silva, R. M.</creator><creatorcontrib>Souza, L. C. ; Crozeta, B. M. ; Guajardo, L. ; Brasil da Costa, F. H. ; Sousa‐Neto, M. D. ; Letra, A. ; Silva, R. M.</creatorcontrib><description>Aim To investigate the expression of TP63 in apical periodontitis (AP) tissues and the association of single nucleotide polymorphisms (SNPs) in the TP63 gene with AP using a case‐control dataset. Methodology Expression of TP63 in human AP lesions (apical abscess, radicular cyst, periapical granuloma) was evaluated using immunohistochemistry. A case‐control association study was performed to assess the association of TP63 polymorphisms in individuals having AP with or without associated pain. Cases were defined as subjects with deep caries and AP (n = 151) and subjects with symptomatic apical periodontitis or acute apical abscess (n = 124). Subjects without AP (n = 169) and asymptomatic (n = 196) were used as controls, respectively. Saliva samples were collected as source of genomic DNA. Twelve SNPs in the TP63 gene were selected for genotyping using Taqman chemistry in real‐time PCR. Data analysis was performed using PLINK software. The Bonferroni method was applied to correct for multiple testing; α ≤ 0.004 indicates significant differences between groups. Results TP63 expression was evident in apical abscesses and radicular cysts, while weaker expression was observed in periapical granulomas. Positive expression was observed in mononuclear cells in the granulation tissues of all AP lesions. Regarding the presence of AP, a trend for allelic association was observed for rs16864812 and rs9810322 (P = 0.04) and rs9810322 genotypes were also nominally associated with AP under a dominant model (P = 0.04). When considering the presence of periapical pain, a trend for allelic and genotypic association was observed for rs10155037 (P = 0.03). Haplotypes were also associated with AP and periapical pain (P ≤ 0.05). Conclusions Apical periodontitis is a complex multifactorial condition and it is likely that multiple genes and environmental effects may influence its susceptibility, progression or both. TP63 variants may play a role in AP pathogenesis and susceptibility, individually or interactively with other genes. Additional studies in other populations and functional studies are needed to improve understanding of the role of TP63 in AP.</description><identifier>ISSN: 0143-2885</identifier><identifier>EISSN: 1365-2591</identifier><identifier>DOI: 10.1111/iej.13133</identifier><identifier>PMID: 31025362</identifier><language>eng</language><publisher>England: Wiley Subscription Services, Inc</publisher><subject>Abscesses ; apical periodontitis ; association ; Cysts ; Dental caries ; Endodontics ; Environmental effects ; Genes ; Genotyping ; Granuloma ; Gum disease ; Haplotypes ; Immunohistochemistry ; Leukocytes (mononuclear) ; Pain ; Periodontitis ; Population studies ; Saliva ; single nucleotide polymorphisms ; Single-nucleotide polymorphism ; TP63</subject><ispartof>International endodontic journal, 2019-09, Vol.52 (9), p.1344-1353</ispartof><rights>2019 International Endodontic Journal. Published by John Wiley &amp; Sons Ltd</rights><rights>2019 International Endodontic Journal. Published by John Wiley &amp; Sons Ltd.</rights><rights>Copyright © 2019 International Endodontic Journal. Published by John Wiley &amp; Sons Ltd</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><orcidid>0000-0002-7057-9850 ; 0000-0002-7696-7600</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://onlinelibrary.wiley.com/doi/pdf/10.1111%2Fiej.13133$$EPDF$$P50$$Gwiley$$H</linktopdf><linktohtml>$$Uhttps://onlinelibrary.wiley.com/doi/full/10.1111%2Fiej.13133$$EHTML$$P50$$Gwiley$$H</linktohtml><link.rule.ids>314,780,784,1417,27924,27925,45574,45575</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/31025362$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Souza, L. C.</creatorcontrib><creatorcontrib>Crozeta, B. M.</creatorcontrib><creatorcontrib>Guajardo, L.</creatorcontrib><creatorcontrib>Brasil da Costa, F. H.</creatorcontrib><creatorcontrib>Sousa‐Neto, M. D.</creatorcontrib><creatorcontrib>Letra, A.</creatorcontrib><creatorcontrib>Silva, R. M.</creatorcontrib><title>Potential role of TP63 in apical periodontitis development</title><title>International endodontic journal</title><addtitle>Int Endod J</addtitle><description>Aim To investigate the expression of TP63 in apical periodontitis (AP) tissues and the association of single nucleotide polymorphisms (SNPs) in the TP63 gene with AP using a case‐control dataset. Methodology Expression of TP63 in human AP lesions (apical abscess, radicular cyst, periapical granuloma) was evaluated using immunohistochemistry. A case‐control association study was performed to assess the association of TP63 polymorphisms in individuals having AP with or without associated pain. Cases were defined as subjects with deep caries and AP (n = 151) and subjects with symptomatic apical periodontitis or acute apical abscess (n = 124). Subjects without AP (n = 169) and asymptomatic (n = 196) were used as controls, respectively. Saliva samples were collected as source of genomic DNA. Twelve SNPs in the TP63 gene were selected for genotyping using Taqman chemistry in real‐time PCR. Data analysis was performed using PLINK software. The Bonferroni method was applied to correct for multiple testing; α ≤ 0.004 indicates significant differences between groups. Results TP63 expression was evident in apical abscesses and radicular cysts, while weaker expression was observed in periapical granulomas. Positive expression was observed in mononuclear cells in the granulation tissues of all AP lesions. Regarding the presence of AP, a trend for allelic association was observed for rs16864812 and rs9810322 (P = 0.04) and rs9810322 genotypes were also nominally associated with AP under a dominant model (P = 0.04). When considering the presence of periapical pain, a trend for allelic and genotypic association was observed for rs10155037 (P = 0.03). Haplotypes were also associated with AP and periapical pain (P ≤ 0.05). Conclusions Apical periodontitis is a complex multifactorial condition and it is likely that multiple genes and environmental effects may influence its susceptibility, progression or both. TP63 variants may play a role in AP pathogenesis and susceptibility, individually or interactively with other genes. Additional studies in other populations and functional studies are needed to improve understanding of the role of TP63 in AP.</description><subject>Abscesses</subject><subject>apical periodontitis</subject><subject>association</subject><subject>Cysts</subject><subject>Dental caries</subject><subject>Endodontics</subject><subject>Environmental effects</subject><subject>Genes</subject><subject>Genotyping</subject><subject>Granuloma</subject><subject>Gum disease</subject><subject>Haplotypes</subject><subject>Immunohistochemistry</subject><subject>Leukocytes (mononuclear)</subject><subject>Pain</subject><subject>Periodontitis</subject><subject>Population studies</subject><subject>Saliva</subject><subject>single nucleotide polymorphisms</subject><subject>Single-nucleotide polymorphism</subject><subject>TP63</subject><issn>0143-2885</issn><issn>1365-2591</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2019</creationdate><recordtype>article</recordtype><recordid>eNo9kE1PwzAMhiMEYmVw4A-gSpy7xXHTpNzQNGBoEjuMc5SurpSpW0rbgfbvyT7AF1v249fyy9g98BGEGDtajwAB8YJFgJlMhMzhkkUcUkyE1nLAbrpuzTmXHOGaDRC4kJiJiD0tfE_b3tk6bn1Nsa_i5SLD2G1j27hVaDfUOl_6wPSui0v6pto3m7Bzy64qW3d0d85D9vkyXU7ekvnH62zyPE8aoXJMUg0Zz1eqAAWFIlWlqJEXBFSluSqVtgqhsGUp1aoqKqmF1JKIW8x1YHMcsseTbtP6rx11vVn7XbsNJ40QSoBMURyohzO1KzZUmqZ1G9vuzd-rARifgB9X0_5_DtwcPDTBQ3P00Mym78cCfwHoj2FY</recordid><startdate>201909</startdate><enddate>201909</enddate><creator>Souza, L. C.</creator><creator>Crozeta, B. M.</creator><creator>Guajardo, L.</creator><creator>Brasil da Costa, F. H.</creator><creator>Sousa‐Neto, M. D.</creator><creator>Letra, A.</creator><creator>Silva, R. M.</creator><general>Wiley Subscription Services, Inc</general><scope>NPM</scope><scope>7QP</scope><scope>K9.</scope><orcidid>https://orcid.org/0000-0002-7057-9850</orcidid><orcidid>https://orcid.org/0000-0002-7696-7600</orcidid></search><sort><creationdate>201909</creationdate><title>Potential role of TP63 in apical periodontitis development</title><author>Souza, L. C. ; Crozeta, B. M. ; Guajardo, L. ; Brasil da Costa, F. H. ; Sousa‐Neto, M. D. ; Letra, A. ; Silva, R. M.</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-p2793-481609c7b171b7e7f43830be1ef497d78a731badd57cfbf582585ee0a398f4393</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2019</creationdate><topic>Abscesses</topic><topic>apical periodontitis</topic><topic>association</topic><topic>Cysts</topic><topic>Dental caries</topic><topic>Endodontics</topic><topic>Environmental effects</topic><topic>Genes</topic><topic>Genotyping</topic><topic>Granuloma</topic><topic>Gum disease</topic><topic>Haplotypes</topic><topic>Immunohistochemistry</topic><topic>Leukocytes (mononuclear)</topic><topic>Pain</topic><topic>Periodontitis</topic><topic>Population studies</topic><topic>Saliva</topic><topic>single nucleotide polymorphisms</topic><topic>Single-nucleotide polymorphism</topic><topic>TP63</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Souza, L. C.</creatorcontrib><creatorcontrib>Crozeta, B. M.</creatorcontrib><creatorcontrib>Guajardo, L.</creatorcontrib><creatorcontrib>Brasil da Costa, F. H.</creatorcontrib><creatorcontrib>Sousa‐Neto, M. D.</creatorcontrib><creatorcontrib>Letra, A.</creatorcontrib><creatorcontrib>Silva, R. M.</creatorcontrib><collection>PubMed</collection><collection>Calcium &amp; Calcified Tissue Abstracts</collection><collection>ProQuest Health &amp; Medical Complete (Alumni)</collection><jtitle>International endodontic journal</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Souza, L. C.</au><au>Crozeta, B. M.</au><au>Guajardo, L.</au><au>Brasil da Costa, F. H.</au><au>Sousa‐Neto, M. D.</au><au>Letra, A.</au><au>Silva, R. M.</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Potential role of TP63 in apical periodontitis development</atitle><jtitle>International endodontic journal</jtitle><addtitle>Int Endod J</addtitle><date>2019-09</date><risdate>2019</risdate><volume>52</volume><issue>9</issue><spage>1344</spage><epage>1353</epage><pages>1344-1353</pages><issn>0143-2885</issn><eissn>1365-2591</eissn><abstract>Aim To investigate the expression of TP63 in apical periodontitis (AP) tissues and the association of single nucleotide polymorphisms (SNPs) in the TP63 gene with AP using a case‐control dataset. Methodology Expression of TP63 in human AP lesions (apical abscess, radicular cyst, periapical granuloma) was evaluated using immunohistochemistry. A case‐control association study was performed to assess the association of TP63 polymorphisms in individuals having AP with or without associated pain. Cases were defined as subjects with deep caries and AP (n = 151) and subjects with symptomatic apical periodontitis or acute apical abscess (n = 124). Subjects without AP (n = 169) and asymptomatic (n = 196) were used as controls, respectively. Saliva samples were collected as source of genomic DNA. Twelve SNPs in the TP63 gene were selected for genotyping using Taqman chemistry in real‐time PCR. Data analysis was performed using PLINK software. The Bonferroni method was applied to correct for multiple testing; α ≤ 0.004 indicates significant differences between groups. Results TP63 expression was evident in apical abscesses and radicular cysts, while weaker expression was observed in periapical granulomas. Positive expression was observed in mononuclear cells in the granulation tissues of all AP lesions. Regarding the presence of AP, a trend for allelic association was observed for rs16864812 and rs9810322 (P = 0.04) and rs9810322 genotypes were also nominally associated with AP under a dominant model (P = 0.04). When considering the presence of periapical pain, a trend for allelic and genotypic association was observed for rs10155037 (P = 0.03). Haplotypes were also associated with AP and periapical pain (P ≤ 0.05). Conclusions Apical periodontitis is a complex multifactorial condition and it is likely that multiple genes and environmental effects may influence its susceptibility, progression or both. TP63 variants may play a role in AP pathogenesis and susceptibility, individually or interactively with other genes. Additional studies in other populations and functional studies are needed to improve understanding of the role of TP63 in AP.</abstract><cop>England</cop><pub>Wiley Subscription Services, Inc</pub><pmid>31025362</pmid><doi>10.1111/iej.13133</doi><tpages>10</tpages><orcidid>https://orcid.org/0000-0002-7057-9850</orcidid><orcidid>https://orcid.org/0000-0002-7696-7600</orcidid></addata></record>
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subjects Abscesses
apical periodontitis
association
Cysts
Dental caries
Endodontics
Environmental effects
Genes
Genotyping
Granuloma
Gum disease
Haplotypes
Immunohistochemistry
Leukocytes (mononuclear)
Pain
Periodontitis
Population studies
Saliva
single nucleotide polymorphisms
Single-nucleotide polymorphism
TP63
title Potential role of TP63 in apical periodontitis development
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