Geographical comparison of genetic diversity in Asian landrace wheat (Triticum aestivum L.) germplasm based on high-molecular-weight glutenin subunits
Glutenin largely determines wheat bread baking quality. As high-molecular-weight glutenin subunit (HMW-GS), related to Glu-1 loci, determines wheat flour elasticity, it correlates strongly with bread-making quality. This study was aimed at clarifying genetic variations in bread-making characteristic...
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description | Glutenin largely determines wheat bread baking quality. As high-molecular-weight glutenin subunit (HMW-GS), related to Glu-1 loci, determines wheat flour elasticity, it correlates strongly with bread-making quality. This study was aimed at clarifying genetic variations in bread-making characteristics between East and West Asian wheat landrace germplasms, by investigating HMW-GS allelic composition of 1068 wheat accessions. Herein, the accession number having reported HMW-GS pattern in previous studies was 855. However, the accession number with newly detected HMW-GS patterns was 114. These new HMW-GS patterns were classified into 4 types based on similarity. Eight Korean accessions with these four types were identified. Concerning landrace germplasm nature, 99 accessions showed heterogeneous patterns caused by seed mixture. The Glu-1 loci allelic variation analysis, revealed that the percentages of Glu-A1c (73.6%), Glu-B1b (60.2%), and Glu-D1a (68.5%) were highest at Glu-A1, Glu-B1, and Glu-D1 loci, respectively. The incidence of preferable alleles for bread baking was high in Chinese accessions. In bread-making quality evaluation using Glu-1 score, 24 among 35 accessions with full score were from China. The polymorphic information content index of each origin based on HMW glutenin subunit combination showed that West Asian and neighboring-regional landraces, excluding Afghanistan ones, were more diverse than East Asian landraces excluding Chinese ones. Cluster analysis based on Glu-1 allelic combination showed that many Korean, Japanese, and Afghan accessions were in the same group. However, many Chinese and other West Asian accessions were in the other group despite geographical distance. |
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As high-molecular-weight glutenin subunit (HMW-GS), related to Glu-1 loci, determines wheat flour elasticity, it correlates strongly with bread-making quality. This study was aimed at clarifying genetic variations in bread-making characteristics between East and West Asian wheat landrace germplasms, by investigating HMW-GS allelic composition of 1068 wheat accessions. Herein, the accession number having reported HMW-GS pattern in previous studies was 855. However, the accession number with newly detected HMW-GS patterns was 114. These new HMW-GS patterns were classified into 4 types based on similarity. Eight Korean accessions with these four types were identified. Concerning landrace germplasm nature, 99 accessions showed heterogeneous patterns caused by seed mixture. The Glu-1 loci allelic variation analysis, revealed that the percentages of Glu-A1c (73.6%), Glu-B1b (60.2%), and Glu-D1a (68.5%) were highest at Glu-A1, Glu-B1, and Glu-D1 loci, respectively. The incidence of preferable alleles for bread baking was high in Chinese accessions. In bread-making quality evaluation using Glu-1 score, 24 among 35 accessions with full score were from China. The polymorphic information content index of each origin based on HMW glutenin subunit combination showed that West Asian and neighboring-regional landraces, excluding Afghanistan ones, were more diverse than East Asian landraces excluding Chinese ones. Cluster analysis based on Glu-1 allelic combination showed that many Korean, Japanese, and Afghan accessions were in the same group. However, many Chinese and other West Asian accessions were in the other group despite geographical distance.</description><identifier>ISSN: 0925-9864</identifier><identifier>EISSN: 1573-5109</identifier><identifier>DOI: 10.1007/s10722-018-0633-6</identifier><language>eng</language><publisher>Dordrecht: Springer Netherlands</publisher><subject>Agriculture ; Baking ; Biomedical and Life Sciences ; Bread ; Cluster analysis ; Elasticity ; Genetic diversity ; Genotype & phenotype ; Germplasm ; Glutenin ; Life Sciences ; Loci ; Molecular chains ; Molecular weight ; Plant Genetics and Genomics ; Plant Physiology ; Plant Sciences ; Plant Systematics/Taxonomy/Biogeography ; Quality assessment ; Research Article ; Triticum aestivum ; Wheat</subject><ispartof>Genetic resources and crop evolution, 2018-08, Vol.65 (6), p.1591-1602</ispartof><rights>Springer Science+Business Media B.V., part of Springer Nature 2018</rights><rights>Copyright Springer Science & Business Media 2018</rights><rights>Genetic Resources and Crop Evolution is a copyright of Springer, (2018). All Rights Reserved.</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c344t-9668a76127a1b6f6ab78b4f9ad1ce920e0373a206430e98ea536b7ca1b4eda763</citedby><cites>FETCH-LOGICAL-c344t-9668a76127a1b6f6ab78b4f9ad1ce920e0373a206430e98ea536b7ca1b4eda763</cites><orcidid>0000-0002-1644-3602</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://link.springer.com/content/pdf/10.1007/s10722-018-0633-6$$EPDF$$P50$$Gspringer$$H</linktopdf><linktohtml>$$Uhttps://link.springer.com/10.1007/s10722-018-0633-6$$EHTML$$P50$$Gspringer$$H</linktohtml><link.rule.ids>314,777,781,27905,27906,41469,42538,51300</link.rule.ids></links><search><creatorcontrib>Lee, Sukyeung</creatorcontrib><creatorcontrib>Choi, Yu-Mi</creatorcontrib><creatorcontrib>Lee, Myung-Chul</creatorcontrib><creatorcontrib>Hyun, Do Yoon</creatorcontrib><creatorcontrib>Oh, Sejong</creatorcontrib><creatorcontrib>Jung, Yeonju</creatorcontrib><title>Geographical comparison of genetic diversity in Asian landrace wheat (Triticum aestivum L.) germplasm based on high-molecular-weight glutenin subunits</title><title>Genetic resources and crop evolution</title><addtitle>Genet Resour Crop Evol</addtitle><description>Glutenin largely determines wheat bread baking quality. As high-molecular-weight glutenin subunit (HMW-GS), related to Glu-1 loci, determines wheat flour elasticity, it correlates strongly with bread-making quality. This study was aimed at clarifying genetic variations in bread-making characteristics between East and West Asian wheat landrace germplasms, by investigating HMW-GS allelic composition of 1068 wheat accessions. Herein, the accession number having reported HMW-GS pattern in previous studies was 855. However, the accession number with newly detected HMW-GS patterns was 114. These new HMW-GS patterns were classified into 4 types based on similarity. Eight Korean accessions with these four types were identified. Concerning landrace germplasm nature, 99 accessions showed heterogeneous patterns caused by seed mixture. The Glu-1 loci allelic variation analysis, revealed that the percentages of Glu-A1c (73.6%), Glu-B1b (60.2%), and Glu-D1a (68.5%) were highest at Glu-A1, Glu-B1, and Glu-D1 loci, respectively. The incidence of preferable alleles for bread baking was high in Chinese accessions. In bread-making quality evaluation using Glu-1 score, 24 among 35 accessions with full score were from China. The polymorphic information content index of each origin based on HMW glutenin subunit combination showed that West Asian and neighboring-regional landraces, excluding Afghanistan ones, were more diverse than East Asian landraces excluding Chinese ones. Cluster analysis based on Glu-1 allelic combination showed that many Korean, Japanese, and Afghan accessions were in the same group. However, many Chinese and other West Asian accessions were in the other group despite geographical distance.</description><subject>Agriculture</subject><subject>Baking</subject><subject>Biomedical and Life Sciences</subject><subject>Bread</subject><subject>Cluster analysis</subject><subject>Elasticity</subject><subject>Genetic diversity</subject><subject>Genotype & phenotype</subject><subject>Germplasm</subject><subject>Glutenin</subject><subject>Life Sciences</subject><subject>Loci</subject><subject>Molecular chains</subject><subject>Molecular weight</subject><subject>Plant Genetics and Genomics</subject><subject>Plant Physiology</subject><subject>Plant Sciences</subject><subject>Plant Systematics/Taxonomy/Biogeography</subject><subject>Quality assessment</subject><subject>Research Article</subject><subject>Triticum aestivum</subject><subject>Wheat</subject><issn>0925-9864</issn><issn>1573-5109</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2018</creationdate><recordtype>article</recordtype><sourceid>AFKRA</sourceid><sourceid>AZQEC</sourceid><sourceid>BENPR</sourceid><sourceid>CCPQU</sourceid><sourceid>DWQXO</sourceid><sourceid>GNUQQ</sourceid><recordid>eNp9kc1q3DAURkVIIZO0D9CdoJtmoVQ_tmQtQ0ingYFu0rW4lq9nFGzZleyEvEifNxqm0FWzkgTnniu-j5DPgt8Izs23LLiRknHRMK6VYvqMbERtFKsFt-dkw62smW10dUEuc37inFujmw35s8Vpn2A-BA8D9dM4Qwp5inTq6R4jLsHTLjxjymF5pSHS2xwg0gFil8AjfTkgLPTrYwqFXEcKmJfwXC67m-siSOM8QB5pCxk7WrSHsD-wcRrQrwMk9oLlvdD9sC4Yiz2v7RrDkj-SDz0MGT_9Pa_Ir-_3j3c_2O7n9uHudse8qqqFWa0bMFpIA6LVvYbWNG3VW-iERys5cmUUSK4rxdE2CLXSrfEFrrArg-qKfDl55zT9Xsvf3dO0plhWOinrEpEp6b5LFXejdWVsocSJ8mnKOWHv5hRGSK9OcHcsyZ1KcqUkdyzJHffL00wubCx5_TP_f-gNXuGWfg</recordid><startdate>20180801</startdate><enddate>20180801</enddate><creator>Lee, Sukyeung</creator><creator>Choi, Yu-Mi</creator><creator>Lee, Myung-Chul</creator><creator>Hyun, Do Yoon</creator><creator>Oh, Sejong</creator><creator>Jung, Yeonju</creator><general>Springer Netherlands</general><general>Springer Nature B.V</general><scope>AAYXX</scope><scope>CITATION</scope><scope>3V.</scope><scope>7X2</scope><scope>8FE</scope><scope>8FH</scope><scope>8FK</scope><scope>AEUYN</scope><scope>AFKRA</scope><scope>ATCPS</scope><scope>AZQEC</scope><scope>BBNVY</scope><scope>BENPR</scope><scope>BHPHI</scope><scope>CCPQU</scope><scope>DWQXO</scope><scope>GNUQQ</scope><scope>HCIFZ</scope><scope>LK8</scope><scope>M0K</scope><scope>M7P</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><orcidid>https://orcid.org/0000-0002-1644-3602</orcidid></search><sort><creationdate>20180801</creationdate><title>Geographical comparison of genetic diversity in Asian landrace wheat (Triticum aestivum L.) germplasm based on high-molecular-weight glutenin subunits</title><author>Lee, Sukyeung ; Choi, Yu-Mi ; Lee, Myung-Chul ; Hyun, Do Yoon ; Oh, Sejong ; Jung, Yeonju</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c344t-9668a76127a1b6f6ab78b4f9ad1ce920e0373a206430e98ea536b7ca1b4eda763</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2018</creationdate><topic>Agriculture</topic><topic>Baking</topic><topic>Biomedical and Life Sciences</topic><topic>Bread</topic><topic>Cluster analysis</topic><topic>Elasticity</topic><topic>Genetic diversity</topic><topic>Genotype & phenotype</topic><topic>Germplasm</topic><topic>Glutenin</topic><topic>Life Sciences</topic><topic>Loci</topic><topic>Molecular chains</topic><topic>Molecular weight</topic><topic>Plant Genetics and Genomics</topic><topic>Plant Physiology</topic><topic>Plant Sciences</topic><topic>Plant Systematics/Taxonomy/Biogeography</topic><topic>Quality assessment</topic><topic>Research Article</topic><topic>Triticum aestivum</topic><topic>Wheat</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Lee, Sukyeung</creatorcontrib><creatorcontrib>Choi, Yu-Mi</creatorcontrib><creatorcontrib>Lee, Myung-Chul</creatorcontrib><creatorcontrib>Hyun, Do Yoon</creatorcontrib><creatorcontrib>Oh, Sejong</creatorcontrib><creatorcontrib>Jung, Yeonju</creatorcontrib><collection>CrossRef</collection><collection>ProQuest Central (Corporate)</collection><collection>Agricultural Science Collection</collection><collection>ProQuest SciTech Collection</collection><collection>ProQuest Natural Science Collection</collection><collection>ProQuest Central (Alumni) (purchase pre-March 2016)</collection><collection>ProQuest One Sustainability</collection><collection>ProQuest Central UK/Ireland</collection><collection>Agricultural & Environmental Science Collection</collection><collection>ProQuest Central Essentials</collection><collection>Biological Science Collection</collection><collection>ProQuest Central</collection><collection>Natural Science Collection</collection><collection>ProQuest One Community College</collection><collection>ProQuest Central Korea</collection><collection>ProQuest Central Student</collection><collection>SciTech Premium Collection</collection><collection>ProQuest Biological Science Collection</collection><collection>Agricultural Science Database</collection><collection>Biological Science Database</collection><collection>ProQuest One Academic Eastern Edition (DO NOT USE)</collection><collection>ProQuest One Academic</collection><collection>ProQuest One Academic UKI Edition</collection><jtitle>Genetic resources and crop evolution</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Lee, Sukyeung</au><au>Choi, Yu-Mi</au><au>Lee, Myung-Chul</au><au>Hyun, Do Yoon</au><au>Oh, Sejong</au><au>Jung, Yeonju</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Geographical comparison of genetic diversity in Asian landrace wheat (Triticum aestivum L.) germplasm based on high-molecular-weight glutenin subunits</atitle><jtitle>Genetic resources and crop evolution</jtitle><stitle>Genet Resour Crop Evol</stitle><date>2018-08-01</date><risdate>2018</risdate><volume>65</volume><issue>6</issue><spage>1591</spage><epage>1602</epage><pages>1591-1602</pages><issn>0925-9864</issn><eissn>1573-5109</eissn><abstract>Glutenin largely determines wheat bread baking quality. As high-molecular-weight glutenin subunit (HMW-GS), related to Glu-1 loci, determines wheat flour elasticity, it correlates strongly with bread-making quality. This study was aimed at clarifying genetic variations in bread-making characteristics between East and West Asian wheat landrace germplasms, by investigating HMW-GS allelic composition of 1068 wheat accessions. Herein, the accession number having reported HMW-GS pattern in previous studies was 855. However, the accession number with newly detected HMW-GS patterns was 114. These new HMW-GS patterns were classified into 4 types based on similarity. Eight Korean accessions with these four types were identified. Concerning landrace germplasm nature, 99 accessions showed heterogeneous patterns caused by seed mixture. The Glu-1 loci allelic variation analysis, revealed that the percentages of Glu-A1c (73.6%), Glu-B1b (60.2%), and Glu-D1a (68.5%) were highest at Glu-A1, Glu-B1, and Glu-D1 loci, respectively. The incidence of preferable alleles for bread baking was high in Chinese accessions. In bread-making quality evaluation using Glu-1 score, 24 among 35 accessions with full score were from China. The polymorphic information content index of each origin based on HMW glutenin subunit combination showed that West Asian and neighboring-regional landraces, excluding Afghanistan ones, were more diverse than East Asian landraces excluding Chinese ones. Cluster analysis based on Glu-1 allelic combination showed that many Korean, Japanese, and Afghan accessions were in the same group. However, many Chinese and other West Asian accessions were in the other group despite geographical distance.</abstract><cop>Dordrecht</cop><pub>Springer Netherlands</pub><doi>10.1007/s10722-018-0633-6</doi><tpages>12</tpages><orcidid>https://orcid.org/0000-0002-1644-3602</orcidid></addata></record> |
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subjects | Agriculture Baking Biomedical and Life Sciences Bread Cluster analysis Elasticity Genetic diversity Genotype & phenotype Germplasm Glutenin Life Sciences Loci Molecular chains Molecular weight Plant Genetics and Genomics Plant Physiology Plant Sciences Plant Systematics/Taxonomy/Biogeography Quality assessment Research Article Triticum aestivum Wheat |
title | Geographical comparison of genetic diversity in Asian landrace wheat (Triticum aestivum L.) germplasm based on high-molecular-weight glutenin subunits |
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