Expression profiles of flavonoid-related gene, 4 coumarate: coenzyme A ligase, and optimization of culturing conditions for the selected flavonoid production in Boesenbergia rotunda
Knowing 4-Coumarate: coenzyme A ligase (4CL) is one of the important enzymes in the biosynthetic pathway of phenylpropanoid, we studied the gene expression profiles of 4CL and determined the production of selected flavonoids in different parts of Boesenbergia rotunda. The optimal growth conditions f...
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description | Knowing 4-Coumarate: coenzyme A ligase (4CL) is one of the important enzymes in the biosynthetic pathway of phenylpropanoid, we studied the gene expression profiles of 4CL and determined the production of selected flavonoids in different parts of Boesenbergia rotunda. The optimal growth conditions for B. rotunda cells were also investigated. In this study, we found that the 4CL transcript was expressed in leaves, rhizomes, and roots with highest expression level found in roots. In contrast, HPLC results showed that the highest total flavonoid contents (pinostrobin, pinocembrin and panduratin A) were recorded in rhizome followed by root and leaf samples. Since rhizome has been found to be a suitable source of explants for in vitro propagation, thus, we initiated sprout from rhizome in order to establish cell suspension cultures. Our study showed that cells grown in full strength Murashige and Skoog basal medium (pH 5.8) containing 1 mg/l 1-napththylacetic acid, 1 mg/l 6-benzyladenine, and 3 % sucrose produced maximal cell biomass and total flavonoid contents. We also found that the 4CL transcript levels for 14- and 10-day old phenylalanine-treated cultures were up-regulated for 22- and 17-fold, respectively, compared to 0-day, indicating the promotive effect of phenylalanine in enhancing the 4CL gene expression. This study provides necessary baseline data for 4CL gene expression profiles and optimal cell culture conditions for the flavonoid production. |
doi_str_mv | 10.1007/s11240-015-0813-4 |
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The optimal growth conditions for B. rotunda cells were also investigated. In this study, we found that the 4CL transcript was expressed in leaves, rhizomes, and roots with highest expression level found in roots. In contrast, HPLC results showed that the highest total flavonoid contents (pinostrobin, pinocembrin and panduratin A) were recorded in rhizome followed by root and leaf samples. Since rhizome has been found to be a suitable source of explants for in vitro propagation, thus, we initiated sprout from rhizome in order to establish cell suspension cultures. Our study showed that cells grown in full strength Murashige and Skoog basal medium (pH 5.8) containing 1 mg/l 1-napththylacetic acid, 1 mg/l 6-benzyladenine, and 3 % sucrose produced maximal cell biomass and total flavonoid contents. We also found that the 4CL transcript levels for 14- and 10-day old phenylalanine-treated cultures were up-regulated for 22- and 17-fold, respectively, compared to 0-day, indicating the promotive effect of phenylalanine in enhancing the 4CL gene expression. This study provides necessary baseline data for 4CL gene expression profiles and optimal cell culture conditions for the flavonoid production.</description><identifier>ISSN: 0167-6857</identifier><identifier>EISSN: 1573-5044</identifier><identifier>DOI: 10.1007/s11240-015-0813-4</identifier><language>eng</language><publisher>Dordrecht: Springer Netherlands</publisher><subject>Aquatic plants ; Benzyladenine ; biochemical pathways ; biomass ; Biomedical and Life Sciences ; Boesenbergia rotunda ; Cell culture ; Coenzyme A ; culture media ; enzymes ; Explants ; Flavonoids ; Gene expression ; genes ; Growth conditions ; High-performance liquid chromatography ; Leaves ; Life Sciences ; Liquid chromatography ; Lymphocytes B ; Optimization ; Original Article ; Phenylalanine ; Plant Genetics and Genomics ; Plant Pathology ; Plant Physiology ; Plant Sciences ; Propagation ; Rhizomes ; Roots ; Sucrose ; Sugar ; Transcription</subject><ispartof>Plant cell, tissue and organ culture, 2015-10, Vol.123 (1), p.47-55</ispartof><rights>Springer Science+Business Media Dordrecht 2015</rights><rights>Plant Cell, Tissue and Organ Culture (PCTOC) is a copyright of Springer, (2015). All Rights Reserved.</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c410t-daec2c03f08a438f7ce9b454eb9ec7f5ec86f770fbd963064cf92dd16b29585a3</citedby><cites>FETCH-LOGICAL-c410t-daec2c03f08a438f7ce9b454eb9ec7f5ec86f770fbd963064cf92dd16b29585a3</cites><orcidid>0000-0001-8503-9569</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://link.springer.com/content/pdf/10.1007/s11240-015-0813-4$$EPDF$$P50$$Gspringer$$H</linktopdf><linktohtml>$$Uhttps://link.springer.com/10.1007/s11240-015-0813-4$$EHTML$$P50$$Gspringer$$H</linktohtml><link.rule.ids>314,780,784,27924,27925,41488,42557,51319</link.rule.ids></links><search><creatorcontrib>Ata, Nabeel</creatorcontrib><creatorcontrib>Yusuf, Nor Azma</creatorcontrib><creatorcontrib>Tan, Boon Chin</creatorcontrib><creatorcontrib>Husaini, Ahmad</creatorcontrib><creatorcontrib>Mohd Yusuf, Yusmin</creatorcontrib><creatorcontrib>Majid, Nazia Abdul</creatorcontrib><creatorcontrib>Khalid, Norzulaani</creatorcontrib><title>Expression profiles of flavonoid-related gene, 4 coumarate: coenzyme A ligase, and optimization of culturing conditions for the selected flavonoid production in Boesenbergia rotunda</title><title>Plant cell, tissue and organ culture</title><addtitle>Plant Cell Tiss Organ Cult</addtitle><description>Knowing 4-Coumarate: coenzyme A ligase (4CL) is one of the important enzymes in the biosynthetic pathway of phenylpropanoid, we studied the gene expression profiles of 4CL and determined the production of selected flavonoids in different parts of Boesenbergia rotunda. The optimal growth conditions for B. rotunda cells were also investigated. In this study, we found that the 4CL transcript was expressed in leaves, rhizomes, and roots with highest expression level found in roots. In contrast, HPLC results showed that the highest total flavonoid contents (pinostrobin, pinocembrin and panduratin A) were recorded in rhizome followed by root and leaf samples. Since rhizome has been found to be a suitable source of explants for in vitro propagation, thus, we initiated sprout from rhizome in order to establish cell suspension cultures. Our study showed that cells grown in full strength Murashige and Skoog basal medium (pH 5.8) containing 1 mg/l 1-napththylacetic acid, 1 mg/l 6-benzyladenine, and 3 % sucrose produced maximal cell biomass and total flavonoid contents. We also found that the 4CL transcript levels for 14- and 10-day old phenylalanine-treated cultures were up-regulated for 22- and 17-fold, respectively, compared to 0-day, indicating the promotive effect of phenylalanine in enhancing the 4CL gene expression. This study provides necessary baseline data for 4CL gene expression profiles and optimal cell culture conditions for the flavonoid production.</description><subject>Aquatic plants</subject><subject>Benzyladenine</subject><subject>biochemical pathways</subject><subject>biomass</subject><subject>Biomedical and Life Sciences</subject><subject>Boesenbergia rotunda</subject><subject>Cell culture</subject><subject>Coenzyme A</subject><subject>culture media</subject><subject>enzymes</subject><subject>Explants</subject><subject>Flavonoids</subject><subject>Gene expression</subject><subject>genes</subject><subject>Growth conditions</subject><subject>High-performance liquid chromatography</subject><subject>Leaves</subject><subject>Life Sciences</subject><subject>Liquid chromatography</subject><subject>Lymphocytes B</subject><subject>Optimization</subject><subject>Original Article</subject><subject>Phenylalanine</subject><subject>Plant Genetics and Genomics</subject><subject>Plant Pathology</subject><subject>Plant Physiology</subject><subject>Plant Sciences</subject><subject>Propagation</subject><subject>Rhizomes</subject><subject>Roots</subject><subject>Sucrose</subject><subject>Sugar</subject><subject>Transcription</subject><issn>0167-6857</issn><issn>1573-5044</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2015</creationdate><recordtype>article</recordtype><sourceid>AFKRA</sourceid><sourceid>AZQEC</sourceid><sourceid>BENPR</sourceid><sourceid>CCPQU</sourceid><sourceid>DWQXO</sourceid><sourceid>GNUQQ</sourceid><recordid>eNp9kctu1jAQhS1EJX4KD8AKS2wxjBM7F3alKhepEou2a8uxx8FVfjvYSUX7Xn0_HIJgx8rWzPnOjOYQ8orDOw7Qvs-cVwIYcMmg4zUTT8iBy7ZmEoR4Sg7Am5Y1nWyfkec53wJAUwt-II8XP-eEOfsY6Jyi8xNmGh11k76LIXrLEk56QUtHDPiWCmrietSplD6UL4aH-yPSMzr5UefS18HSOC_-6B_0spkWL7NOy5p8GAsQrN_KmbqY6PIdacYJzeb_d-K2h13Nb9oH-jFixjBgGr2mKS5rsPoFOXF6yvjyz3tKbj5dXJ9_YZffPn89P7tkRnBYmNVoKgO1g06LunOtwX4QUuDQo2mdRNM1rm3BDbZvamiEcX1lLW-Gqped1PUpebP7lpV-rJgXdRvXFMpIVVWyr3tZdEXFd5VJMeeETs3JlxvdKw5qS0ft6aiSjtrSUaIw1c7kebsMpn_O_4Ne75DTUekx-axurqoSLQAvMtHXvwCE46By</recordid><startdate>20151001</startdate><enddate>20151001</enddate><creator>Ata, Nabeel</creator><creator>Yusuf, Nor Azma</creator><creator>Tan, Boon Chin</creator><creator>Husaini, Ahmad</creator><creator>Mohd Yusuf, Yusmin</creator><creator>Majid, Nazia Abdul</creator><creator>Khalid, Norzulaani</creator><general>Springer Netherlands</general><general>Springer Nature B.V</general><scope>FBQ</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>3V.</scope><scope>7X2</scope><scope>8FE</scope><scope>8FH</scope><scope>8FK</scope><scope>AFKRA</scope><scope>ATCPS</scope><scope>AZQEC</scope><scope>BBNVY</scope><scope>BENPR</scope><scope>BHPHI</scope><scope>CCPQU</scope><scope>DWQXO</scope><scope>GNUQQ</scope><scope>HCIFZ</scope><scope>LK8</scope><scope>M0K</scope><scope>M7P</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><orcidid>https://orcid.org/0000-0001-8503-9569</orcidid></search><sort><creationdate>20151001</creationdate><title>Expression profiles of flavonoid-related gene, 4 coumarate: coenzyme A ligase, and optimization of culturing conditions for the selected flavonoid production in Boesenbergia rotunda</title><author>Ata, Nabeel ; Yusuf, Nor Azma ; Tan, Boon Chin ; Husaini, Ahmad ; Mohd Yusuf, Yusmin ; Majid, Nazia Abdul ; Khalid, Norzulaani</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c410t-daec2c03f08a438f7ce9b454eb9ec7f5ec86f770fbd963064cf92dd16b29585a3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2015</creationdate><topic>Aquatic plants</topic><topic>Benzyladenine</topic><topic>biochemical pathways</topic><topic>biomass</topic><topic>Biomedical and Life Sciences</topic><topic>Boesenbergia rotunda</topic><topic>Cell culture</topic><topic>Coenzyme A</topic><topic>culture media</topic><topic>enzymes</topic><topic>Explants</topic><topic>Flavonoids</topic><topic>Gene expression</topic><topic>genes</topic><topic>Growth conditions</topic><topic>High-performance liquid chromatography</topic><topic>Leaves</topic><topic>Life Sciences</topic><topic>Liquid chromatography</topic><topic>Lymphocytes B</topic><topic>Optimization</topic><topic>Original Article</topic><topic>Phenylalanine</topic><topic>Plant Genetics and Genomics</topic><topic>Plant Pathology</topic><topic>Plant Physiology</topic><topic>Plant Sciences</topic><topic>Propagation</topic><topic>Rhizomes</topic><topic>Roots</topic><topic>Sucrose</topic><topic>Sugar</topic><topic>Transcription</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Ata, Nabeel</creatorcontrib><creatorcontrib>Yusuf, Nor Azma</creatorcontrib><creatorcontrib>Tan, Boon Chin</creatorcontrib><creatorcontrib>Husaini, Ahmad</creatorcontrib><creatorcontrib>Mohd Yusuf, Yusmin</creatorcontrib><creatorcontrib>Majid, Nazia Abdul</creatorcontrib><creatorcontrib>Khalid, Norzulaani</creatorcontrib><collection>AGRIS</collection><collection>CrossRef</collection><collection>ProQuest Central (Corporate)</collection><collection>Agricultural Science Collection</collection><collection>ProQuest SciTech Collection</collection><collection>ProQuest Natural Science Collection</collection><collection>ProQuest Central (Alumni) (purchase pre-March 2016)</collection><collection>ProQuest Central UK/Ireland</collection><collection>Agricultural & Environmental Science Collection</collection><collection>ProQuest Central Essentials</collection><collection>Biological Science Collection</collection><collection>ProQuest Central</collection><collection>Natural Science Collection</collection><collection>ProQuest One Community College</collection><collection>ProQuest Central Korea</collection><collection>ProQuest Central Student</collection><collection>SciTech Premium Collection</collection><collection>ProQuest Biological Science Collection</collection><collection>Agricultural Science Database</collection><collection>ProQuest Biological Science Journals</collection><collection>ProQuest One Academic Eastern Edition (DO NOT USE)</collection><collection>ProQuest One Academic</collection><collection>ProQuest One Academic UKI Edition</collection><jtitle>Plant cell, tissue and organ culture</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Ata, Nabeel</au><au>Yusuf, Nor Azma</au><au>Tan, Boon Chin</au><au>Husaini, Ahmad</au><au>Mohd Yusuf, Yusmin</au><au>Majid, Nazia Abdul</au><au>Khalid, Norzulaani</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Expression profiles of flavonoid-related gene, 4 coumarate: coenzyme A ligase, and optimization of culturing conditions for the selected flavonoid production in Boesenbergia rotunda</atitle><jtitle>Plant cell, tissue and organ culture</jtitle><stitle>Plant Cell Tiss Organ Cult</stitle><date>2015-10-01</date><risdate>2015</risdate><volume>123</volume><issue>1</issue><spage>47</spage><epage>55</epage><pages>47-55</pages><issn>0167-6857</issn><eissn>1573-5044</eissn><abstract>Knowing 4-Coumarate: coenzyme A ligase (4CL) is one of the important enzymes in the biosynthetic pathway of phenylpropanoid, we studied the gene expression profiles of 4CL and determined the production of selected flavonoids in different parts of Boesenbergia rotunda. The optimal growth conditions for B. rotunda cells were also investigated. In this study, we found that the 4CL transcript was expressed in leaves, rhizomes, and roots with highest expression level found in roots. In contrast, HPLC results showed that the highest total flavonoid contents (pinostrobin, pinocembrin and panduratin A) were recorded in rhizome followed by root and leaf samples. Since rhizome has been found to be a suitable source of explants for in vitro propagation, thus, we initiated sprout from rhizome in order to establish cell suspension cultures. Our study showed that cells grown in full strength Murashige and Skoog basal medium (pH 5.8) containing 1 mg/l 1-napththylacetic acid, 1 mg/l 6-benzyladenine, and 3 % sucrose produced maximal cell biomass and total flavonoid contents. We also found that the 4CL transcript levels for 14- and 10-day old phenylalanine-treated cultures were up-regulated for 22- and 17-fold, respectively, compared to 0-day, indicating the promotive effect of phenylalanine in enhancing the 4CL gene expression. This study provides necessary baseline data for 4CL gene expression profiles and optimal cell culture conditions for the flavonoid production.</abstract><cop>Dordrecht</cop><pub>Springer Netherlands</pub><doi>10.1007/s11240-015-0813-4</doi><tpages>9</tpages><orcidid>https://orcid.org/0000-0001-8503-9569</orcidid></addata></record> |
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subjects | Aquatic plants Benzyladenine biochemical pathways biomass Biomedical and Life Sciences Boesenbergia rotunda Cell culture Coenzyme A culture media enzymes Explants Flavonoids Gene expression genes Growth conditions High-performance liquid chromatography Leaves Life Sciences Liquid chromatography Lymphocytes B Optimization Original Article Phenylalanine Plant Genetics and Genomics Plant Pathology Plant Physiology Plant Sciences Propagation Rhizomes Roots Sucrose Sugar Transcription |
title | Expression profiles of flavonoid-related gene, 4 coumarate: coenzyme A ligase, and optimization of culturing conditions for the selected flavonoid production in Boesenbergia rotunda |
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