initial investigation of the taxonomic status of Saussurea esthonica Baer ex Rupr. utilising DNA markers and sequencing
Saussurea esthonica Baer ex Rupr. is a species of the genus Saussurea that is found in Estonia, Latvia and the Leningrad region in Russia. Only two populations have been identified in Latvia, and it is protected at the national level. The taxonomic relationships within this genus are unclear, and th...
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description | Saussurea esthonica Baer ex Rupr. is a species of the genus Saussurea that is found in Estonia, Latvia and the Leningrad region in Russia. Only two populations have been identified in Latvia, and it is protected at the national level. The taxonomic relationships within this genus are unclear, and the majority of phylogenetic studies of this genus have been undertaken on species found in Asia. The relationship of S. esthonica to the other Saussurea species is equally unclear, with some suggestions that this species should be regarded as a subspecies of S. alpina. Two different molecular marker techniques, iPBS and ITS sequencing, were utilised to investigate the phylogeny of S. esthonica and its relationship with other Saussurea species, including three European species: S. alpina, S. pygmaea and S. discolor. The phylogeny obtained with the iPBS markers was similar to that obtained with the ITS sequences. The phylogenies obtained were broadly consistent with previous morphological classification, with S. alpina, S. esthonica and S. discolor clustering together. S. pulchella, S. albescens and S. candicans also formed one discrete cluster. The taxonomic status of S. esthonica was not unambiguously determined, with Norwegian and Italian S. alpina populations clustering with Latvian and Estonian S. esthonica populations, and the Austrian S. alpina populations clustering with Austrian S. discolor populations. |
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Only two populations have been identified in Latvia, and it is protected at the national level. The taxonomic relationships within this genus are unclear, and the majority of phylogenetic studies of this genus have been undertaken on species found in Asia. The relationship of S. esthonica to the other Saussurea species is equally unclear, with some suggestions that this species should be regarded as a subspecies of S. alpina. Two different molecular marker techniques, iPBS and ITS sequencing, were utilised to investigate the phylogeny of S. esthonica and its relationship with other Saussurea species, including three European species: S. alpina, S. pygmaea and S. discolor. The phylogeny obtained with the iPBS markers was similar to that obtained with the ITS sequences. The phylogenies obtained were broadly consistent with previous morphological classification, with S. alpina, S. esthonica and S. discolor clustering together. S. pulchella, S. albescens and S. candicans also formed one discrete cluster. The taxonomic status of S. esthonica was not unambiguously determined, with Norwegian and Italian S. alpina populations clustering with Latvian and Estonian S. esthonica populations, and the Austrian S. alpina populations clustering with Austrian S. discolor populations.</description><identifier>ISSN: 0378-2697</identifier><identifier>EISSN: 1615-6110</identifier><identifier>EISSN: 2199-6881</identifier><identifier>DOI: 10.1007/s00606-012-0600-1</identifier><language>eng</language><publisher>Vienna: Springer-Verlag</publisher><subject>Biological taxonomies ; Biomedical and Life Sciences ; Clustering ; Discoloration ; DNA sequencing ; genetic markers ; Germination ; internal transcribed spacers ; Life Sciences ; Markers ; Original Article ; Phylogenetics ; Phylogeny ; Plant Anatomy/Development ; Plant Ecology ; Plant Sciences ; Plant Systematics/Taxonomy/Biogeography ; Plants ; Polymerase chain reaction ; Population genetics ; Populations ; Retrotransposons ; Saussurea ; Seeds ; Sequencing ; Species ; Taxonomy</subject><ispartof>Plant systematics and evolution, 2012-05, Vol.298 (5), p.913-919</ispartof><rights>Springer-Verlag 2012</rights><rights>Plant Systematics and Evolution is a copyright of Springer, (2012). All Rights Reserved.</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c362t-90e660dbcf7f8fc53640bd7f2748406ffeaac22c7086d393aee8afcb004845db3</citedby><cites>FETCH-LOGICAL-c362t-90e660dbcf7f8fc53640bd7f2748406ffeaac22c7086d393aee8afcb004845db3</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.jstor.org/stable/pdf/43558294$$EPDF$$P50$$Gjstor$$H</linktopdf><linktohtml>$$Uhttps://www.jstor.org/stable/43558294$$EHTML$$P50$$Gjstor$$H</linktohtml><link.rule.ids>315,781,785,804,27926,27927,41490,42559,51321,58019,58252</link.rule.ids></links><search><creatorcontrib>Gailite, Agnese</creatorcontrib><creatorcontrib>Rungis, Dainis</creatorcontrib><title>initial investigation of the taxonomic status of Saussurea esthonica Baer ex Rupr. utilising DNA markers and sequencing</title><title>Plant systematics and evolution</title><addtitle>Plant Syst Evol</addtitle><description>Saussurea esthonica Baer ex Rupr. is a species of the genus Saussurea that is found in Estonia, Latvia and the Leningrad region in Russia. Only two populations have been identified in Latvia, and it is protected at the national level. The taxonomic relationships within this genus are unclear, and the majority of phylogenetic studies of this genus have been undertaken on species found in Asia. The relationship of S. esthonica to the other Saussurea species is equally unclear, with some suggestions that this species should be regarded as a subspecies of S. alpina. Two different molecular marker techniques, iPBS and ITS sequencing, were utilised to investigate the phylogeny of S. esthonica and its relationship with other Saussurea species, including three European species: S. alpina, S. pygmaea and S. discolor. The phylogeny obtained with the iPBS markers was similar to that obtained with the ITS sequences. The phylogenies obtained were broadly consistent with previous morphological classification, with S. alpina, S. esthonica and S. discolor clustering together. S. pulchella, S. albescens and S. candicans also formed one discrete cluster. The taxonomic status of S. esthonica was not unambiguously determined, with Norwegian and Italian S. alpina populations clustering with Latvian and Estonian S. esthonica populations, and the Austrian S. alpina populations clustering with Austrian S. discolor populations.</description><subject>Biological taxonomies</subject><subject>Biomedical and Life Sciences</subject><subject>Clustering</subject><subject>Discoloration</subject><subject>DNA sequencing</subject><subject>genetic markers</subject><subject>Germination</subject><subject>internal transcribed spacers</subject><subject>Life Sciences</subject><subject>Markers</subject><subject>Original Article</subject><subject>Phylogenetics</subject><subject>Phylogeny</subject><subject>Plant Anatomy/Development</subject><subject>Plant Ecology</subject><subject>Plant Sciences</subject><subject>Plant Systematics/Taxonomy/Biogeography</subject><subject>Plants</subject><subject>Polymerase chain reaction</subject><subject>Population genetics</subject><subject>Populations</subject><subject>Retrotransposons</subject><subject>Saussurea</subject><subject>Seeds</subject><subject>Sequencing</subject><subject>Species</subject><subject>Taxonomy</subject><issn>0378-2697</issn><issn>1615-6110</issn><issn>2199-6881</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2012</creationdate><recordtype>article</recordtype><sourceid>AFKRA</sourceid><sourceid>AZQEC</sourceid><sourceid>BENPR</sourceid><sourceid>CCPQU</sourceid><sourceid>DWQXO</sourceid><sourceid>GNUQQ</sourceid><recordid>eNp9UMtuFDEQtCIiZQl8AAeEJc4T2vaMPXPMi4AUESmPs-X12BsvG3txe5Lw9_FqULjl1K2uqq5SEfKJwREDUN8QQIJsgPGmLtCwPbJgknWNZAzekQUI1TdcDuqAvEdcAzAlW7UgTyGGEsyGhvjosISVKSFFmjwt944W85xiegiWYjFlwt39xkyIU3aGVv59isEaemJcpu6ZXk_bfESnEjYBQ1zRs1_H9MHk3y4jNXGk6P5MLtoKfSD73mzQffw3D8nd9_Pb0x_N5dXFz9Pjy8YKyUszgJMSxqX1yvfedkK2sByV56rtW5DeO2Ms51ZBL0cxCONcb7xdAlS8G5fikHyd_25zqt5Y9DpNOVZLzXk3CClVLyqLzSybE2J2Xm9zqMH_agZ616-e-9W1X73rV7Oq4bMGKzeuXP7_-S3R51m0xpLyq0sruq7nQ1vxLzPuTdJmlQPquxsOrAWAvubl4gWPMZIh</recordid><startdate>20120501</startdate><enddate>20120501</enddate><creator>Gailite, Agnese</creator><creator>Rungis, Dainis</creator><general>Springer-Verlag</general><general>Springer Vienna</general><general>Springer Nature B.V</general><scope>FBQ</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>3V.</scope><scope>7X2</scope><scope>8FE</scope><scope>8FH</scope><scope>8FK</scope><scope>AFKRA</scope><scope>ATCPS</scope><scope>AZQEC</scope><scope>BBNVY</scope><scope>BENPR</scope><scope>BHPHI</scope><scope>CCPQU</scope><scope>DWQXO</scope><scope>GNUQQ</scope><scope>HCIFZ</scope><scope>LK8</scope><scope>M0K</scope><scope>M7P</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope></search><sort><creationdate>20120501</creationdate><title>initial investigation of the taxonomic status of Saussurea esthonica Baer ex Rupr. utilising DNA markers and sequencing</title><author>Gailite, Agnese ; Rungis, Dainis</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c362t-90e660dbcf7f8fc53640bd7f2748406ffeaac22c7086d393aee8afcb004845db3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2012</creationdate><topic>Biological taxonomies</topic><topic>Biomedical and Life Sciences</topic><topic>Clustering</topic><topic>Discoloration</topic><topic>DNA sequencing</topic><topic>genetic markers</topic><topic>Germination</topic><topic>internal transcribed spacers</topic><topic>Life Sciences</topic><topic>Markers</topic><topic>Original Article</topic><topic>Phylogenetics</topic><topic>Phylogeny</topic><topic>Plant Anatomy/Development</topic><topic>Plant Ecology</topic><topic>Plant Sciences</topic><topic>Plant Systematics/Taxonomy/Biogeography</topic><topic>Plants</topic><topic>Polymerase chain reaction</topic><topic>Population genetics</topic><topic>Populations</topic><topic>Retrotransposons</topic><topic>Saussurea</topic><topic>Seeds</topic><topic>Sequencing</topic><topic>Species</topic><topic>Taxonomy</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Gailite, Agnese</creatorcontrib><creatorcontrib>Rungis, Dainis</creatorcontrib><collection>AGRIS</collection><collection>CrossRef</collection><collection>ProQuest Central (Corporate)</collection><collection>Agricultural Science Collection</collection><collection>ProQuest SciTech Collection</collection><collection>ProQuest Natural Science Collection</collection><collection>ProQuest Central (Alumni) (purchase pre-March 2016)</collection><collection>ProQuest Central UK/Ireland</collection><collection>Agricultural & Environmental Science Collection</collection><collection>ProQuest Central Essentials</collection><collection>Biological Science Collection</collection><collection>ProQuest Central</collection><collection>ProQuest Natural Science Collection</collection><collection>ProQuest One Community College</collection><collection>ProQuest Central Korea</collection><collection>ProQuest Central Student</collection><collection>SciTech Premium Collection (Proquest) (PQ_SDU_P3)</collection><collection>ProQuest Biological Science Collection</collection><collection>Agricultural Science Database</collection><collection>ProQuest Biological Science Journals</collection><collection>ProQuest One Academic Eastern Edition (DO NOT USE)</collection><collection>ProQuest One Academic</collection><collection>ProQuest One Academic UKI Edition</collection><jtitle>Plant systematics and evolution</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Gailite, Agnese</au><au>Rungis, Dainis</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>initial investigation of the taxonomic status of Saussurea esthonica Baer ex Rupr. utilising DNA markers and sequencing</atitle><jtitle>Plant systematics and evolution</jtitle><stitle>Plant Syst Evol</stitle><date>2012-05-01</date><risdate>2012</risdate><volume>298</volume><issue>5</issue><spage>913</spage><epage>919</epage><pages>913-919</pages><issn>0378-2697</issn><eissn>1615-6110</eissn><eissn>2199-6881</eissn><abstract>Saussurea esthonica Baer ex Rupr. is a species of the genus Saussurea that is found in Estonia, Latvia and the Leningrad region in Russia. Only two populations have been identified in Latvia, and it is protected at the national level. The taxonomic relationships within this genus are unclear, and the majority of phylogenetic studies of this genus have been undertaken on species found in Asia. The relationship of S. esthonica to the other Saussurea species is equally unclear, with some suggestions that this species should be regarded as a subspecies of S. alpina. Two different molecular marker techniques, iPBS and ITS sequencing, were utilised to investigate the phylogeny of S. esthonica and its relationship with other Saussurea species, including three European species: S. alpina, S. pygmaea and S. discolor. The phylogeny obtained with the iPBS markers was similar to that obtained with the ITS sequences. The phylogenies obtained were broadly consistent with previous morphological classification, with S. alpina, S. esthonica and S. discolor clustering together. S. pulchella, S. albescens and S. candicans also formed one discrete cluster. The taxonomic status of S. esthonica was not unambiguously determined, with Norwegian and Italian S. alpina populations clustering with Latvian and Estonian S. esthonica populations, and the Austrian S. alpina populations clustering with Austrian S. discolor populations.</abstract><cop>Vienna</cop><pub>Springer-Verlag</pub><doi>10.1007/s00606-012-0600-1</doi><tpages>7</tpages></addata></record> |
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subjects | Biological taxonomies Biomedical and Life Sciences Clustering Discoloration DNA sequencing genetic markers Germination internal transcribed spacers Life Sciences Markers Original Article Phylogenetics Phylogeny Plant Anatomy/Development Plant Ecology Plant Sciences Plant Systematics/Taxonomy/Biogeography Plants Polymerase chain reaction Population genetics Populations Retrotransposons Saussurea Seeds Sequencing Species Taxonomy |
title | initial investigation of the taxonomic status of Saussurea esthonica Baer ex Rupr. utilising DNA markers and sequencing |
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