Phylogeny and classification of Rosaceae
Phylogenetic relationships among 88 genera of Rosaceae were investigated using nucleotide sequence data from six nuclear (18S, gbssi1, gbssi2, ITS, pgip, and ppo) and four chloroplast (matK, ndhF, rbcL, and trnL-trnF) regions, separately and in various combinations, with parsimony and likelihood-bas...
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| Veröffentlicht in: | Plant systematics and evolution 2007-07, Vol.266 (1-2), p.5-43 |
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| container_title | Plant systematics and evolution |
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| creator | Potter, D Eriksson, T Evans, R. C Oh, S Smedmark, J. E. E Morgan, D. R Kerr, M Robertson, K. R Arsenault, M Dickinson, T. A Campbell, C. S |
| description | Phylogenetic relationships among 88 genera of Rosaceae were investigated using nucleotide sequence data from six nuclear (18S, gbssi1, gbssi2, ITS, pgip, and ppo) and four chloroplast (matK, ndhF, rbcL, and trnL-trnF) regions, separately and in various combinations, with parsimony and likelihood-based Bayesian approaches. The results were used to examine evolution of non-molecular characters and to develop a new phylogenetically based infrafamilial classification. As in previous molecular phylogenetic analyses of the family, we found strong support for monophyly of groups corresponding closely to many previously recognized tribes and subfamilies, but no previous classification was entirely supported, and relationships among the strongly supported clades were weakly resolved and/or conflicted between some data sets. We recognize three subfamilies in Rosaceae: Rosoideae, including Filipendula, Rubus, Rosa, and three tribes; Dryadoideae, comprising the four actinorhizal genera; and Spiraeoideae, comprising Lyonothamnus and seven tribes. All genera previously assigned to Amygdaloideae and Maloideae are included in Spiraeoideae. Three supertribes, one in Rosoideae and two in Spiraeoideae, are recognized. |
| doi_str_mv | 10.1007/s00606-007-0539-9 |
| format | Article |
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C ; Oh, S ; Smedmark, J. E. E ; Morgan, D. R ; Kerr, M ; Robertson, K. R ; Arsenault, M ; Dickinson, T. A ; Campbell, C. S</creator><creatorcontrib>Potter, D ; Eriksson, T ; Evans, R. C ; Oh, S ; Smedmark, J. E. E ; Morgan, D. R ; Kerr, M ; Robertson, K. R ; Arsenault, M ; Dickinson, T. A ; Campbell, C. S</creatorcontrib><description>Phylogenetic relationships among 88 genera of Rosaceae were investigated using nucleotide sequence data from six nuclear (18S, gbssi1, gbssi2, ITS, pgip, and ppo) and four chloroplast (matK, ndhF, rbcL, and trnL-trnF) regions, separately and in various combinations, with parsimony and likelihood-based Bayesian approaches. The results were used to examine evolution of non-molecular characters and to develop a new phylogenetically based infrafamilial classification. As in previous molecular phylogenetic analyses of the family, we found strong support for monophyly of groups corresponding closely to many previously recognized tribes and subfamilies, but no previous classification was entirely supported, and relationships among the strongly supported clades were weakly resolved and/or conflicted between some data sets. We recognize three subfamilies in Rosaceae: Rosoideae, including Filipendula, Rubus, Rosa, and three tribes; Dryadoideae, comprising the four actinorhizal genera; and Spiraeoideae, comprising Lyonothamnus and seven tribes. All genera previously assigned to Amygdaloideae and Maloideae are included in Spiraeoideae. Three supertribes, one in Rosoideae and two in Spiraeoideae, are recognized.</description><identifier>ISSN: 0378-2697</identifier><identifier>EISSN: 1615-6110</identifier><identifier>EISSN: 2199-6881</identifier><identifier>DOI: 10.1007/s00606-007-0539-9</identifier><language>eng</language><publisher>Heidelberg: Vienna : Springer Vienna</publisher><subject>Bayesian analysis ; Chloroplasts ; chromosome number ; Classification ; Datasets ; Drupes ; Evolution ; fruit type ; Genera ; Kerriodae ; Maximum parsimony ; Nucleotide sequence ; Nucleotides ; Ovaries ; Phylogenetics ; Phylogeny ; Ploidies ; Pyrodae ; Rosaceae ; Rosodae ; Spiraeoideae ; Taxa</subject><ispartof>Plant systematics and evolution, 2007-07, Vol.266 (1-2), p.5-43</ispartof><rights>Springer-Verlag 2007</rights><rights>Plant Systematics and Evolution is a copyright of Springer, (2007). 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| ispartof | Plant systematics and evolution, 2007-07, Vol.266 (1-2), p.5-43 |
| issn | 0378-2697 1615-6110 2199-6881 |
| language | eng |
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| source | SpringerNature Journals; JSTOR Archive Collection A-Z Listing |
| subjects | Bayesian analysis Chloroplasts chromosome number Classification Datasets Drupes Evolution fruit type Genera Kerriodae Maximum parsimony Nucleotide sequence Nucleotides Ovaries Phylogenetics Phylogeny Ploidies Pyrodae Rosaceae Rosodae Spiraeoideae Taxa |
| title | Phylogeny and classification of Rosaceae |
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