GENETIC CHARACTERIZATION OF GRAPEVINE GERMPLASM (VITIS VINIFERA L.) BY SSR (SIMPLE SEQUENCE REPEATS) IN SANLIURFA PROVINCE, SOUTHEAST TURKEY
In this study, grape cultivars growing in Sanhurfa were analyzed and compared using molecular markers. The analysis was performed with 50 genotypes using 7 microsatellite markers. Total number of alleles per locus ranged from 7 (VrZAG62 and VrZAG79) to 9 (VVS2), with a mean number of 7.9 alleles per...
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| Veröffentlicht in: | Fresenius environmental bulletin 2019-05, Vol.28 (5), p.3835 |
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| creator | Karatas, Huseyin Karaagac, Eda Karatas, Dilek Agaoglu, Sabit |
| description | In this study, grape cultivars growing in Sanhurfa were analyzed and compared using molecular markers. The analysis was performed with 50 genotypes using 7 microsatellite markers. Total number of alleles per locus ranged from 7 (VrZAG62 and VrZAG79) to 9 (VVS2), with a mean number of 7.9 alleles per locus. The expected and observed heterozygosity were 0. 7509 and 0.6958, respectively. Clustering analysis was conducted using the UPGMA method (Unweighted Pair-Group Method using Arithmetic means). The analysis of similarity index revealed 6 distinct groups, each of which included several subgroups: Group I included 8, Group II included 4, Group III included 11, Group IV included 9, Group V included 10, and Group VI included 8 subgroups. The two reference genotypes, Cabemet Sauvignon and Merlot, were classified into a separate subgroup within Group V. In conclusion, 17 synonyms and 8 homonyms were identified for the genotypes analyzed in our study. |
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BY SSR (SIMPLE SEQUENCE REPEATS) IN SANLIURFA PROVINCE, SOUTHEAST TURKEY</title><source>EZB-FREE-00999 freely available EZB journals</source><creator>Karatas, Huseyin ; Karaagac, Eda ; Karatas, Dilek ; Agaoglu, Sabit</creator><creatorcontrib>Karatas, Huseyin ; Karaagac, Eda ; Karatas, Dilek ; Agaoglu, Sabit</creatorcontrib><description>In this study, grape cultivars growing in Sanhurfa were analyzed and compared using molecular markers. The analysis was performed with 50 genotypes using 7 microsatellite markers. Total number of alleles per locus ranged from 7 (VrZAG62 and VrZAG79) to 9 (VVS2), with a mean number of 7.9 alleles per locus. The expected and observed heterozygosity were 0. 7509 and 0.6958, respectively. Clustering analysis was conducted using the UPGMA method (Unweighted Pair-Group Method using Arithmetic means). The analysis of similarity index revealed 6 distinct groups, each of which included several subgroups: Group I included 8, Group II included 4, Group III included 11, Group IV included 9, Group V included 10, and Group VI included 8 subgroups. The two reference genotypes, Cabemet Sauvignon and Merlot, were classified into a separate subgroup within Group V. In conclusion, 17 synonyms and 8 homonyms were identified for the genotypes analyzed in our study.</description><identifier>ISSN: 1018-4619</identifier><identifier>EISSN: 1610-2304</identifier><language>eng</language><publisher>Freising: Parlar Scientific Publications</publisher><subject>Alleles ; Cluster analysis ; Clustering ; Cultivars ; Genetic markers ; Genotypes ; Germplasm ; Grapevines ; Heterozygosity ; Loci ; Markers ; Microsatellites ; Simple sequence repeats ; Subgroups</subject><ispartof>Fresenius environmental bulletin, 2019-05, Vol.28 (5), p.3835</ispartof><rights>Copyright Parlar Scientific Publications May 2019</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,780,784</link.rule.ids></links><search><creatorcontrib>Karatas, Huseyin</creatorcontrib><creatorcontrib>Karaagac, Eda</creatorcontrib><creatorcontrib>Karatas, Dilek</creatorcontrib><creatorcontrib>Agaoglu, Sabit</creatorcontrib><title>GENETIC CHARACTERIZATION OF GRAPEVINE GERMPLASM (VITIS VINIFERA L.) 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In conclusion, 17 synonyms and 8 homonyms were identified for the genotypes analyzed in our study.</description><subject>Alleles</subject><subject>Cluster analysis</subject><subject>Clustering</subject><subject>Cultivars</subject><subject>Genetic markers</subject><subject>Genotypes</subject><subject>Germplasm</subject><subject>Grapevines</subject><subject>Heterozygosity</subject><subject>Loci</subject><subject>Markers</subject><subject>Microsatellites</subject><subject>Simple sequence repeats</subject><subject>Subgroups</subject><issn>1018-4619</issn><issn>1610-2304</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2019</creationdate><recordtype>article</recordtype><recordid>eNotTc1Kw0AYDKJg0b7DB15aMLJ_STbHdfmSLqZJ3N0U6qW0TXIoYmvTvoUPbUDnMsMwPzfBhMaUhIwTcTtqQmUoYpreB9NhOJARMUtYzCfBT44leqNBL5RV2qM1H8qbqoQqg9yqGlemRMjRLutCuSXMVsYbB6NrMrQKipc5vK7BOQszZ8YQgsP3BkuNYLFG5d0cTAlOlYVpbKagttXY1vgMrmr8ApXz4Bv7huvH4K7ffg7d9J8fgiZDrxdhUeVGqyI8UckvoeBdzNhWskSSuBf9jrCI0igVtN1KIajsO5nKHRV9kgrS7QWJWsL2Yp9G8a5tJX8Inv52T-fj97UbLpvD8Xr-Gi83jIk04YxSwn8Bo8dT9Q</recordid><startdate>20190501</startdate><enddate>20190501</enddate><creator>Karatas, Huseyin</creator><creator>Karaagac, Eda</creator><creator>Karatas, Dilek</creator><creator>Agaoglu, Sabit</creator><general>Parlar Scientific Publications</general><scope>7ST</scope><scope>7T7</scope><scope>7U7</scope><scope>8FD</scope><scope>C1K</scope><scope>FR3</scope><scope>P64</scope><scope>SOI</scope></search><sort><creationdate>20190501</creationdate><title>GENETIC CHARACTERIZATION OF GRAPEVINE GERMPLASM (VITIS VINIFERA L.) BY SSR (SIMPLE SEQUENCE REPEATS) IN SANLIURFA PROVINCE, SOUTHEAST TURKEY</title><author>Karatas, Huseyin ; Karaagac, Eda ; Karatas, Dilek ; Agaoglu, Sabit</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-p183t-43e622a827806f4fb025115941da84418fe898b14f7940ec405d02c4c956bdd83</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2019</creationdate><topic>Alleles</topic><topic>Cluster analysis</topic><topic>Clustering</topic><topic>Cultivars</topic><topic>Genetic markers</topic><topic>Genotypes</topic><topic>Germplasm</topic><topic>Grapevines</topic><topic>Heterozygosity</topic><topic>Loci</topic><topic>Markers</topic><topic>Microsatellites</topic><topic>Simple sequence repeats</topic><topic>Subgroups</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Karatas, Huseyin</creatorcontrib><creatorcontrib>Karaagac, Eda</creatorcontrib><creatorcontrib>Karatas, Dilek</creatorcontrib><creatorcontrib>Agaoglu, Sabit</creatorcontrib><collection>Environment Abstracts</collection><collection>Industrial and Applied Microbiology Abstracts (Microbiology A)</collection><collection>Toxicology Abstracts</collection><collection>Technology Research Database</collection><collection>Environmental Sciences and Pollution Management</collection><collection>Engineering Research Database</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>Environment Abstracts</collection><jtitle>Fresenius environmental bulletin</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Karatas, Huseyin</au><au>Karaagac, Eda</au><au>Karatas, Dilek</au><au>Agaoglu, Sabit</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>GENETIC CHARACTERIZATION OF GRAPEVINE GERMPLASM (VITIS VINIFERA L.) 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| source | EZB-FREE-00999 freely available EZB journals |
| subjects | Alleles Cluster analysis Clustering Cultivars Genetic markers Genotypes Germplasm Grapevines Heterozygosity Loci Markers Microsatellites Simple sequence repeats Subgroups |
| title | GENETIC CHARACTERIZATION OF GRAPEVINE GERMPLASM (VITIS VINIFERA L.) BY SSR (SIMPLE SEQUENCE REPEATS) IN SANLIURFA PROVINCE, SOUTHEAST TURKEY |
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