Proteomic profiling of HIV-1 infection of human CD4+ T cells identifies PSGL-1 as an HIV restriction factor

Human immunodeficiency virus (HIV) actively modulates the protein stability of host cells to optimize viral replication. To systematically examine this modulation in HIV infection, we used isobaric tag-based mass spectrometry to quantify changes in the abundance of over 14,000 proteins during HIV-1...

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Veröffentlicht in:Nature microbiology 2019-05, Vol.4 (5), p.813-825
Hauptverfasser: Liu, Ying, Fu, Yajing, Wang, Qian, Li, Mushan, Zhou, Zheng, Dabbagh, Deemah, Fu, Chunyan, Zhang, Hang, Li, Shuo, Zhang, Tengjiang, Gong, Jing, Kong, Xiaohui, Zhai, Weiwei, Su, Jiaming, Sun, Jianping, Zhang, Yonghong, Yu, Xiao-Fang, Shao, Zhen, Zhou, Feng, Wu, Yuntao, Tan, Xu
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container_issue 5
container_start_page 813
container_title Nature microbiology
container_volume 4
creator Liu, Ying
Fu, Yajing
Wang, Qian
Li, Mushan
Zhou, Zheng
Dabbagh, Deemah
Fu, Chunyan
Zhang, Hang
Li, Shuo
Zhang, Tengjiang
Gong, Jing
Kong, Xiaohui
Zhai, Weiwei
Su, Jiaming
Sun, Jianping
Zhang, Yonghong
Yu, Xiao-Fang
Shao, Zhen
Zhou, Feng
Wu, Yuntao
Tan, Xu
description Human immunodeficiency virus (HIV) actively modulates the protein stability of host cells to optimize viral replication. To systematically examine this modulation in HIV infection, we used isobaric tag-based mass spectrometry to quantify changes in the abundance of over 14,000 proteins during HIV-1 infection of human primary CD4 + T cells. We identified P-selectin glycoprotein ligand 1 (PSGL-1) as an HIV-1 restriction factor downregulated by HIV-1 Vpu, which binds to PSGL-1 and induces its ubiquitination and degradation through the ubiquitin ligase SCF β-TrCP2 . PSGL-1 is induced by interferon-γ in activated CD4 + T cells to inhibit HIV-1 reverse transcription and potently block viral infectivity by incorporating in progeny virions. This infectivity block is antagonized by Vpu via PSGL-1 degradation. We further show that PSGL-1 knockdown can significantly abolish the anti-HIV activity of interferon-γ in primary CD4 + T cells. Our study identifies an HIV restriction factor and a key mediator of interferon-γ’s anti-HIV activity. Proteomic analysis of human immunodeficiency virus (HIV-1)-infected human primary T cells identifies P-selectin glycoprotein ligand 1 as an HIV-1 restriction factor, which can inhibit HIV-1 reverse transcription and block viral infectivity through incorporation in progeny virions antagonized by HIV-1 viral protein U.
doi_str_mv 10.1038/s41564-019-0372-2
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To systematically examine this modulation in HIV infection, we used isobaric tag-based mass spectrometry to quantify changes in the abundance of over 14,000 proteins during HIV-1 infection of human primary CD4 + T cells. We identified P-selectin glycoprotein ligand 1 (PSGL-1) as an HIV-1 restriction factor downregulated by HIV-1 Vpu, which binds to PSGL-1 and induces its ubiquitination and degradation through the ubiquitin ligase SCF β-TrCP2 . PSGL-1 is induced by interferon-γ in activated CD4 + T cells to inhibit HIV-1 reverse transcription and potently block viral infectivity by incorporating in progeny virions. This infectivity block is antagonized by Vpu via PSGL-1 degradation. We further show that PSGL-1 knockdown can significantly abolish the anti-HIV activity of interferon-γ in primary CD4 + T cells. Our study identifies an HIV restriction factor and a key mediator of interferon-γ’s anti-HIV activity. 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To systematically examine this modulation in HIV infection, we used isobaric tag-based mass spectrometry to quantify changes in the abundance of over 14,000 proteins during HIV-1 infection of human primary CD4 + T cells. We identified P-selectin glycoprotein ligand 1 (PSGL-1) as an HIV-1 restriction factor downregulated by HIV-1 Vpu, which binds to PSGL-1 and induces its ubiquitination and degradation through the ubiquitin ligase SCF β-TrCP2 . PSGL-1 is induced by interferon-γ in activated CD4 + T cells to inhibit HIV-1 reverse transcription and potently block viral infectivity by incorporating in progeny virions. This infectivity block is antagonized by Vpu via PSGL-1 degradation. We further show that PSGL-1 knockdown can significantly abolish the anti-HIV activity of interferon-γ in primary CD4 + T cells. Our study identifies an HIV restriction factor and a key mediator of interferon-γ’s anti-HIV activity. 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physiopathology</subject><subject>HIV Infections - virology</subject><subject>HIV-1 - genetics</subject><subject>HIV-1 - physiology</subject><subject>Host-Pathogen Interactions</subject><subject>Human immunodeficiency virus</subject><subject>Human Immunodeficiency Virus Proteins - genetics</subject><subject>Human Immunodeficiency Virus Proteins - metabolism</subject><subject>Humans</subject><subject>Infections</subject><subject>Infectious Diseases</subject><subject>Infectivity</subject><subject>Interferon-gamma - genetics</subject><subject>Interferon-gamma - metabolism</subject><subject>Life Sciences</subject><subject>Lymphocytes</subject><subject>Lymphocytes T</subject><subject>Mass spectroscopy</subject><subject>Medical Microbiology</subject><subject>Membrane Glycoproteins - genetics</subject><subject>Membrane Glycoproteins - metabolism</subject><subject>Microbiology</subject><subject>P-selectin</subject><subject>P-selectin glycoprotein ligand 1</subject><subject>Parasitology</subject><subject>Proteolysis</subject><subject>Proteomics</subject><subject>Reverse transcription</subject><subject>SKP Cullin F-Box Protein Ligases - genetics</subject><subject>SKP Cullin F-Box Protein Ligases - metabolism</subject><subject>Ubiquitin</subject><subject>Ubiquitin-protein ligase</subject><subject>Ubiquitination</subject><subject>Viral Regulatory and Accessory Proteins - genetics</subject><subject>Viral Regulatory and Accessory Proteins - metabolism</subject><subject>Virions</subject><subject>Virology</subject><subject>γ-Interferon</subject><issn>2058-5276</issn><issn>2058-5276</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2019</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><sourceid>BENPR</sourceid><recordid>eNp1kEtLAzEUhYMottT-ADcScCmjeU0ms5SqbaFgweI2ZDJJTZ1HTWYW_ntTpj42rnLJPd-59x4ALjG6xYiKu8BwylmCcJ4gmpGEnIAxQalIUpLx0z_1CExD2CGEMCecC34ORhQJGhk2Bu9r33amrZ2Ge99aV7lmC1sLF8vXBEPXWKM71zaHr7e-Vg2cPbAbuIHaVFWArjRN56wzAa5f5qtIqACjKNLQm9B5N9BW6a71F-DMqiqY6fGdgM3T42a2SFbP8-XsfpXouFOX5IJiXrK0LC1XWSlQYRBRHOdG40KXRGc0T7HAhc1sPIMirRmzhUBpwRTjdAKuB9t40Ecft5C7tvdNnCgJYQSjnFEUVXhQad-G4I2Ve-9q5T8lRvIQsBwCljFgeQhYkshcHZ37ojblD_EdZxSQQRBiq9ka_zv6f9cvGZGDZQ</recordid><startdate>20190501</startdate><enddate>20190501</enddate><creator>Liu, Ying</creator><creator>Fu, Yajing</creator><creator>Wang, Qian</creator><creator>Li, Mushan</creator><creator>Zhou, Zheng</creator><creator>Dabbagh, Deemah</creator><creator>Fu, Chunyan</creator><creator>Zhang, Hang</creator><creator>Li, Shuo</creator><creator>Zhang, Tengjiang</creator><creator>Gong, Jing</creator><creator>Kong, Xiaohui</creator><creator>Zhai, Weiwei</creator><creator>Su, Jiaming</creator><creator>Sun, Jianping</creator><creator>Zhang, Yonghong</creator><creator>Yu, Xiao-Fang</creator><creator>Shao, Zhen</creator><creator>Zhou, Feng</creator><creator>Wu, Yuntao</creator><creator>Tan, Xu</creator><general>Nature Publishing Group UK</general><general>Nature Publishing Group</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>8FE</scope><scope>8FH</scope><scope>AFKRA</scope><scope>AZQEC</scope><scope>BBNVY</scope><scope>BENPR</scope><scope>BHPHI</scope><scope>CCPQU</scope><scope>DWQXO</scope><scope>GNUQQ</scope><scope>HCIFZ</scope><scope>LK8</scope><scope>M7P</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>PRINS</scope><orcidid>https://orcid.org/0000-0003-4861-4573</orcidid><orcidid>https://orcid.org/0000-0002-8748-7186</orcidid><orcidid>https://orcid.org/0000-0002-7626-4139</orcidid><orcidid>https://orcid.org/0000-0002-9547-3278</orcidid></search><sort><creationdate>20190501</creationdate><title>Proteomic profiling of HIV-1 infection of human CD4+ T cells identifies PSGL-1 as an HIV restriction factor</title><author>Liu, Ying ; Fu, Yajing ; Wang, Qian ; Li, Mushan ; Zhou, Zheng ; Dabbagh, Deemah ; Fu, Chunyan ; Zhang, Hang ; Li, Shuo ; Zhang, Tengjiang ; Gong, Jing ; Kong, Xiaohui ; Zhai, Weiwei ; Su, Jiaming ; Sun, Jianping ; Zhang, Yonghong ; Yu, Xiao-Fang ; Shao, Zhen ; Zhou, Feng ; Wu, Yuntao ; Tan, Xu</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c372t-98316d45ddf6a7d80be02a619ec1bcd2c7395181bf7f83330cc44fb805b4a463</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2019</creationdate><topic>14/1</topic><topic>14/19</topic><topic>14/28</topic><topic>38/89</topic><topic>38/91</topic><topic>42/44</topic><topic>42/89</topic><topic>45/91</topic><topic>631/326/596/1787</topic><topic>631/45/475</topic><topic>82/58</topic><topic>82/83</topic><topic>Antiviral activity</topic><topic>Biomedical and Life Sciences</topic><topic>CD162 antigen</topic><topic>CD4 antigen</topic><topic>CD4-Positive T-Lymphocytes - 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source MEDLINE; SpringerLink Journals
subjects 14/1
14/19
14/28
38/89
38/91
42/44
42/89
45/91
631/326/596/1787
631/45/475
82/58
82/83
Antiviral activity
Biomedical and Life Sciences
CD162 antigen
CD4 antigen
CD4-Positive T-Lymphocytes - metabolism
CD4-Positive T-Lymphocytes - virology
HIV
HIV Infections - genetics
HIV Infections - metabolism
HIV Infections - physiopathology
HIV Infections - virology
HIV-1 - genetics
HIV-1 - physiology
Host-Pathogen Interactions
Human immunodeficiency virus
Human Immunodeficiency Virus Proteins - genetics
Human Immunodeficiency Virus Proteins - metabolism
Humans
Infections
Infectious Diseases
Infectivity
Interferon-gamma - genetics
Interferon-gamma - metabolism
Life Sciences
Lymphocytes
Lymphocytes T
Mass spectroscopy
Medical Microbiology
Membrane Glycoproteins - genetics
Membrane Glycoproteins - metabolism
Microbiology
P-selectin
P-selectin glycoprotein ligand 1
Parasitology
Proteolysis
Proteomics
Reverse transcription
SKP Cullin F-Box Protein Ligases - genetics
SKP Cullin F-Box Protein Ligases - metabolism
Ubiquitin
Ubiquitin-protein ligase
Ubiquitination
Viral Regulatory and Accessory Proteins - genetics
Viral Regulatory and Accessory Proteins - metabolism
Virions
Virology
γ-Interferon
title Proteomic profiling of HIV-1 infection of human CD4+ T cells identifies PSGL-1 as an HIV restriction factor
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