NEW INFORMATION FOR SYSTEMATICS, TAXONOMY, AND PHYLOGEOGRAPHY OF THE RODENT GENUS APODEMUS (SYLVAEMUS) IN UKRAINE
In 2004, we collected 211 specimens of European field mice (genus Apodemus; subgenus Sylvaemus) from 16 localities in northern, western, central, and southern Ukraine, including the Crimean Peninsula. We used cytochrome-b mitochondrial DNA sequence data to investigate species diversity, distribution...
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description | In 2004, we collected 211 specimens of European field mice (genus Apodemus; subgenus Sylvaemus) from 16 localities in northern, western, central, and southern Ukraine, including the Crimean Peninsula. We used cytochrome-b mitochondrial DNA sequence data to investigate species diversity, distributional patterns, and taxonomy of Apodemus in Ukraine. Sequence data proved useful for species-level discrimination, because the 11 species examined were defined by low levels of intraspecific variation (mean range, 0.00–3.35%) and by high levels of interspecific variation (mean range, 5.37–18.9%). We identified the 211 specimens to 1 of 4 species: A. flavicollis (n = 121), A. sylvaticus (n = 34), A. uralensis (n = 16), and A. witherbyi (n = 40). Although all 4 species are known from Ukraine, this study provides new information about the ranges and population identity for these species in southeastern Europe. For example, our analyses substantiate the marked genetic structure reported for A. sylvaticus and document the presence of northern and southern continental lineages of this species in Ukraine that are hypothesized to have been isolated from each other in glacial refugia approximately 1.5 million years ago (>5% genetic divergence). Banks of the Dneiper River in northern Ukraine represent an area of secondary contact for the 2 lineages. Additionally, although application of A. witherbyi as a species-level name is debatable, examination of our genetic and morphological data supports its validity and priority over junior synonyms A. hermonensis and A. iconicus. |
doi_str_mv | 10.1644/06-MAMM-A-218R1.1 |
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We used cytochrome-b mitochondrial DNA sequence data to investigate species diversity, distributional patterns, and taxonomy of Apodemus in Ukraine. Sequence data proved useful for species-level discrimination, because the 11 species examined were defined by low levels of intraspecific variation (mean range, 0.00–3.35%) and by high levels of interspecific variation (mean range, 5.37–18.9%). We identified the 211 specimens to 1 of 4 species: A. flavicollis (n = 121), A. sylvaticus (n = 34), A. uralensis (n = 16), and A. witherbyi (n = 40). Although all 4 species are known from Ukraine, this study provides new information about the ranges and population identity for these species in southeastern Europe. For example, our analyses substantiate the marked genetic structure reported for A. sylvaticus and document the presence of northern and southern continental lineages of this species in Ukraine that are hypothesized to have been isolated from each other in glacial refugia approximately 1.5 million years ago (>5% genetic divergence). Banks of the Dneiper River in northern Ukraine represent an area of secondary contact for the 2 lineages. Additionally, although application of A. witherbyi as a species-level name is debatable, examination of our genetic and morphological data supports its validity and priority over junior synonyms A. hermonensis and A. iconicus.</description><identifier>ISSN: 0022-2372</identifier><identifier>EISSN: 1545-1542</identifier><identifier>DOI: 10.1644/06-MAMM-A-218R1.1</identifier><identifier>CODEN: JOMAAL</identifier><language>eng</language><publisher>Provo, UT: American Society of Mammalogists</publisher><subject>Animal ethology ; Apodemus ; Biological and medical sciences ; Biological taxonomies ; Computer software ; cytochrome b ; distribution ; FEATURE ARTICLES ; Fundamental and applied biological sciences. Psychology ; Genetic structure ; Genetic variation ; Haplotypes ; Mammalia ; Mammalogy ; Mammals ; Mice ; Mitochondrial DNA ; Phylogenetics ; Psychology. Psychoanalysis. Psychiatry ; Refugia ; Rodentia ; Rodents ; Species diversity ; Specimens ; Sylvaemus ; Systematics ; Taxonomy ; Ukraine ; Vertebrata ; Zoology</subject><ispartof>Journal of mammalogy, 2007-04, Vol.88 (2), p.330-342</ispartof><rights>American Society of Mammalogists</rights><rights>Copyright 2007 American Society of Mammalogists</rights><rights>2007 INIST-CNRS</rights><rights>Copyright Alliance Communications Group, A Division of Allen Press, Inc. Apr 2007</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-b363t-dea65dfbefd22486c827702baf359f8fdbf15b181b2987db8caadd4c686798d13</citedby><cites>FETCH-LOGICAL-b363t-dea65dfbefd22486c827702baf359f8fdbf15b181b2987db8caadd4c686798d13</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://bioone.org/doi/pdf/10.1644/06-MAMM-A-218R1.1$$EPDF$$P50$$Gbioone$$H</linktopdf><linktohtml>$$Uhttps://www.jstor.org/stable/4498662$$EHTML$$P50$$Gjstor$$H</linktohtml><link.rule.ids>314,780,784,803,26978,27924,27925,52363,58017,58250</link.rule.ids><backlink>$$Uhttp://pascal-francis.inist.fr/vibad/index.php?action=getRecordDetail&idt=18724818$$DView record in Pascal Francis$$Hfree_for_read</backlink></links><search><creatorcontrib>Hoofer, Steven R.</creatorcontrib><creatorcontrib>Gaschak, Sergey</creatorcontrib><creatorcontrib>Dunina-Barkovskaya, Yelena</creatorcontrib><creatorcontrib>Makluk, Julia</creatorcontrib><creatorcontrib>Meeks, Heather N.</creatorcontrib><creatorcontrib>Wickliffe, Jeffrey K.</creatorcontrib><creatorcontrib>Baker, Robert J.</creatorcontrib><title>NEW INFORMATION FOR SYSTEMATICS, TAXONOMY, AND PHYLOGEOGRAPHY OF THE RODENT GENUS APODEMUS (SYLVAEMUS) IN UKRAINE</title><title>Journal of mammalogy</title><description>In 2004, we collected 211 specimens of European field mice (genus Apodemus; subgenus Sylvaemus) from 16 localities in northern, western, central, and southern Ukraine, including the Crimean Peninsula. We used cytochrome-b mitochondrial DNA sequence data to investigate species diversity, distributional patterns, and taxonomy of Apodemus in Ukraine. Sequence data proved useful for species-level discrimination, because the 11 species examined were defined by low levels of intraspecific variation (mean range, 0.00–3.35%) and by high levels of interspecific variation (mean range, 5.37–18.9%). We identified the 211 specimens to 1 of 4 species: A. flavicollis (n = 121), A. sylvaticus (n = 34), A. uralensis (n = 16), and A. witherbyi (n = 40). Although all 4 species are known from Ukraine, this study provides new information about the ranges and population identity for these species in southeastern Europe. For example, our analyses substantiate the marked genetic structure reported for A. sylvaticus and document the presence of northern and southern continental lineages of this species in Ukraine that are hypothesized to have been isolated from each other in glacial refugia approximately 1.5 million years ago (>5% genetic divergence). Banks of the Dneiper River in northern Ukraine represent an area of secondary contact for the 2 lineages. Additionally, although application of A. witherbyi as a species-level name is debatable, examination of our genetic and morphological data supports its validity and priority over junior synonyms A. hermonensis and A. iconicus.</description><subject>Animal ethology</subject><subject>Apodemus</subject><subject>Biological and medical sciences</subject><subject>Biological taxonomies</subject><subject>Computer software</subject><subject>cytochrome b</subject><subject>distribution</subject><subject>FEATURE ARTICLES</subject><subject>Fundamental and applied biological sciences. Psychology</subject><subject>Genetic structure</subject><subject>Genetic variation</subject><subject>Haplotypes</subject><subject>Mammalia</subject><subject>Mammalogy</subject><subject>Mammals</subject><subject>Mice</subject><subject>Mitochondrial DNA</subject><subject>Phylogenetics</subject><subject>Psychology. Psychoanalysis. Psychiatry</subject><subject>Refugia</subject><subject>Rodentia</subject><subject>Rodents</subject><subject>Species diversity</subject><subject>Specimens</subject><subject>Sylvaemus</subject><subject>Systematics</subject><subject>Taxonomy</subject><subject>Ukraine</subject><subject>Vertebrata</subject><subject>Zoology</subject><issn>0022-2372</issn><issn>1545-1542</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2007</creationdate><recordtype>article</recordtype><sourceid>8G5</sourceid><sourceid>ABUWG</sourceid><sourceid>AFKRA</sourceid><sourceid>AZQEC</sourceid><sourceid>BENPR</sourceid><sourceid>CCPQU</sourceid><sourceid>DWQXO</sourceid><sourceid>GNUQQ</sourceid><sourceid>GUQSH</sourceid><sourceid>M2O</sourceid><recordid>eNqNUF1PwjAUbYwmIvoDTHxoTEw0YdB2W1ceGxgfkW1kGypPTffRBIIMVnjw39sJ0Vdfbs_NOfec5gBwj1EXU8fpIWoFPAgsbhHMYtzFF6CFXce1zCCXoIUQIRaxPXINbrReI4Rcj6AW2If-O5yGoygOeDqNQmgQTJZJ6jf7IOnAlH9EYRQsO5CHQzifLGfR2I_GMTcQRiOYTnwYR0M_TOHYDxcJ5HOzBQY8J8vZG2_gi4mAi9eYT0P_FlwpudHl3fltg8XITwcTy_hOB3xmZTa1D1ZRSuoWKitVQYjDaM6I5yGSSWW7fcVUkSnsZpjhjPSZV2Qsl7IonJwy6vVZge02eDz57upqfyz1QayrY701kYIQ7LimNdeI8EmU15XWdanErl59yvpLYCSaYgWioilWcPFTrGiMn87GUudyo2q5zVf675B55r-YGd3DSbfWh6r-5R2nzyglhu6d6GxVVdvyH8HfBjKICg</recordid><startdate>20070401</startdate><enddate>20070401</enddate><creator>Hoofer, Steven R.</creator><creator>Gaschak, Sergey</creator><creator>Dunina-Barkovskaya, Yelena</creator><creator>Makluk, Julia</creator><creator>Meeks, Heather N.</creator><creator>Wickliffe, Jeffrey K.</creator><creator>Baker, Robert J.</creator><general>American Society of Mammalogists</general><general>Brigham Young University, Department of Zoology</general><general>Oxford University Press</general><scope>IQODW</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>3V.</scope><scope>7QG</scope><scope>7SN</scope><scope>7X7</scope><scope>7XB</scope><scope>88A</scope><scope>88E</scope><scope>88I</scope><scope>8AF</scope><scope>8FD</scope><scope>8FE</scope><scope>8FH</scope><scope>8FI</scope><scope>8FJ</scope><scope>8FK</scope><scope>8G5</scope><scope>ABUWG</scope><scope>AFKRA</scope><scope>AZQEC</scope><scope>BBNVY</scope><scope>BENPR</scope><scope>BHPHI</scope><scope>C1K</scope><scope>CCPQU</scope><scope>DWQXO</scope><scope>FR3</scope><scope>FYUFA</scope><scope>GHDGH</scope><scope>GNUQQ</scope><scope>GUQSH</scope><scope>HCIFZ</scope><scope>K9.</scope><scope>LK8</scope><scope>M0S</scope><scope>M1P</scope><scope>M2O</scope><scope>M2P</scope><scope>M7P</scope><scope>MBDVC</scope><scope>P64</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>Q9U</scope><scope>R05</scope><scope>RC3</scope><scope>S0X</scope></search><sort><creationdate>20070401</creationdate><title>NEW INFORMATION FOR SYSTEMATICS, TAXONOMY, AND PHYLOGEOGRAPHY OF THE RODENT GENUS APODEMUS (SYLVAEMUS) IN UKRAINE</title><author>Hoofer, Steven R. ; Gaschak, Sergey ; Dunina-Barkovskaya, Yelena ; Makluk, Julia ; Meeks, Heather N. ; Wickliffe, Jeffrey K. ; Baker, Robert J.</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-b363t-dea65dfbefd22486c827702baf359f8fdbf15b181b2987db8caadd4c686798d13</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2007</creationdate><topic>Animal ethology</topic><topic>Apodemus</topic><topic>Biological and medical sciences</topic><topic>Biological taxonomies</topic><topic>Computer software</topic><topic>cytochrome b</topic><topic>distribution</topic><topic>FEATURE ARTICLES</topic><topic>Fundamental and applied biological sciences. Psychology</topic><topic>Genetic structure</topic><topic>Genetic variation</topic><topic>Haplotypes</topic><topic>Mammalia</topic><topic>Mammalogy</topic><topic>Mammals</topic><topic>Mice</topic><topic>Mitochondrial DNA</topic><topic>Phylogenetics</topic><topic>Psychology. Psychoanalysis. Psychiatry</topic><topic>Refugia</topic><topic>Rodentia</topic><topic>Rodents</topic><topic>Species diversity</topic><topic>Specimens</topic><topic>Sylvaemus</topic><topic>Systematics</topic><topic>Taxonomy</topic><topic>Ukraine</topic><topic>Vertebrata</topic><topic>Zoology</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Hoofer, Steven R.</creatorcontrib><creatorcontrib>Gaschak, Sergey</creatorcontrib><creatorcontrib>Dunina-Barkovskaya, Yelena</creatorcontrib><creatorcontrib>Makluk, Julia</creatorcontrib><creatorcontrib>Meeks, Heather N.</creatorcontrib><creatorcontrib>Wickliffe, Jeffrey K.</creatorcontrib><creatorcontrib>Baker, Robert J.</creatorcontrib><collection>Pascal-Francis</collection><collection>CrossRef</collection><collection>ProQuest Central (Corporate)</collection><collection>Animal Behavior Abstracts</collection><collection>Ecology Abstracts</collection><collection>Proquest Health and Medical Complete</collection><collection>ProQuest Central (purchase pre-March 2016)</collection><collection>Biology Database (Alumni Edition)</collection><collection>Medical Database (Alumni Edition)</collection><collection>Science Database (Alumni Edition)</collection><collection>STEM Database</collection><collection>Technology Research Database</collection><collection>ProQuest SciTech Collection</collection><collection>ProQuest Natural Science Collection</collection><collection>Hospital Premium Collection</collection><collection>Hospital Premium Collection (Alumni Edition)</collection><collection>ProQuest Central (Alumni) (purchase pre-March 2016)</collection><collection>Research Library (Alumni Edition)</collection><collection>ProQuest Central (Alumni)</collection><collection>ProQuest Central UK/Ireland</collection><collection>ProQuest Central Essentials</collection><collection>Biological Science Collection</collection><collection>ProQuest Central</collection><collection>ProQuest Natural Science Collection</collection><collection>Environmental Sciences and Pollution Management</collection><collection>ProQuest One Community College</collection><collection>ProQuest Central</collection><collection>Engineering Research Database</collection><collection>Health Research Premium Collection</collection><collection>Health Research Premium Collection (Alumni)</collection><collection>ProQuest Central Student</collection><collection>Research Library Prep</collection><collection>SciTech Premium Collection</collection><collection>ProQuest Health & Medical Complete (Alumni)</collection><collection>ProQuest Biological Science Collection</collection><collection>Health & Medical Collection (Alumni Edition)</collection><collection>PML(ProQuest Medical Library)</collection><collection>Research Library</collection><collection>ProQuest Science Journals</collection><collection>Biological Science Database</collection><collection>Research Library (Corporate)</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>ProQuest One Academic Eastern Edition (DO NOT USE)</collection><collection>ProQuest One Academic</collection><collection>ProQuest One Academic UKI Edition</collection><collection>ProQuest Central Basic</collection><collection>University of Michigan</collection><collection>Genetics Abstracts</collection><collection>SIRS Editorial</collection><jtitle>Journal of mammalogy</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Hoofer, Steven R.</au><au>Gaschak, Sergey</au><au>Dunina-Barkovskaya, Yelena</au><au>Makluk, Julia</au><au>Meeks, Heather N.</au><au>Wickliffe, Jeffrey K.</au><au>Baker, Robert J.</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>NEW INFORMATION FOR SYSTEMATICS, TAXONOMY, AND PHYLOGEOGRAPHY OF THE RODENT GENUS APODEMUS (SYLVAEMUS) IN UKRAINE</atitle><jtitle>Journal of mammalogy</jtitle><date>2007-04-01</date><risdate>2007</risdate><volume>88</volume><issue>2</issue><spage>330</spage><epage>342</epage><pages>330-342</pages><issn>0022-2372</issn><eissn>1545-1542</eissn><coden>JOMAAL</coden><abstract>In 2004, we collected 211 specimens of European field mice (genus Apodemus; subgenus Sylvaemus) from 16 localities in northern, western, central, and southern Ukraine, including the Crimean Peninsula. We used cytochrome-b mitochondrial DNA sequence data to investigate species diversity, distributional patterns, and taxonomy of Apodemus in Ukraine. Sequence data proved useful for species-level discrimination, because the 11 species examined were defined by low levels of intraspecific variation (mean range, 0.00–3.35%) and by high levels of interspecific variation (mean range, 5.37–18.9%). We identified the 211 specimens to 1 of 4 species: A. flavicollis (n = 121), A. sylvaticus (n = 34), A. uralensis (n = 16), and A. witherbyi (n = 40). Although all 4 species are known from Ukraine, this study provides new information about the ranges and population identity for these species in southeastern Europe. For example, our analyses substantiate the marked genetic structure reported for A. sylvaticus and document the presence of northern and southern continental lineages of this species in Ukraine that are hypothesized to have been isolated from each other in glacial refugia approximately 1.5 million years ago (>5% genetic divergence). Banks of the Dneiper River in northern Ukraine represent an area of secondary contact for the 2 lineages. Additionally, although application of A. witherbyi as a species-level name is debatable, examination of our genetic and morphological data supports its validity and priority over junior synonyms A. hermonensis and A. iconicus.</abstract><cop>Provo, UT</cop><pub>American Society of Mammalogists</pub><doi>10.1644/06-MAMM-A-218R1.1</doi><tpages>13</tpages></addata></record> |
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subjects | Animal ethology Apodemus Biological and medical sciences Biological taxonomies Computer software cytochrome b distribution FEATURE ARTICLES Fundamental and applied biological sciences. Psychology Genetic structure Genetic variation Haplotypes Mammalia Mammalogy Mammals Mice Mitochondrial DNA Phylogenetics Psychology. Psychoanalysis. Psychiatry Refugia Rodentia Rodents Species diversity Specimens Sylvaemus Systematics Taxonomy Ukraine Vertebrata Zoology |
title | NEW INFORMATION FOR SYSTEMATICS, TAXONOMY, AND PHYLOGEOGRAPHY OF THE RODENT GENUS APODEMUS (SYLVAEMUS) IN UKRAINE |
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