Molecular characterization and expression analysis of a highly conserved rice mago nashi homolog
Mago Nashi, a protein initially shown to be essential in the development of the Drosophila oocyte, is highly conserved among species and shows no homology to any other known cellular proteins. Here we report the nucleotide sequence of a cDNA and a partial gene that encode rice Mago Nashi protein hom...
Gespeichert in:
Veröffentlicht in: | Genome 2001-06, Vol.44 (3), p.394-400 |
---|---|
Hauptverfasser: | , , , , |
Format: | Artikel |
Sprache: | eng |
Schlagworte: | |
Online-Zugang: | Volltext |
Tags: |
Tag hinzufügen
Keine Tags, Fügen Sie den ersten Tag hinzu!
|
container_end_page | 400 |
---|---|
container_issue | 3 |
container_start_page | 394 |
container_title | Genome |
container_volume | 44 |
creator | Swidzinski, J.A Zaplachinski, S.T Chuong, S.D.X Wong, J.F.K Muench, D.G |
description | Mago Nashi, a protein initially shown to be essential in the development of the Drosophila oocyte, is highly conserved among species and shows no homology to any other known cellular proteins. Here we report the nucleotide sequence of a cDNA and a partial gene that encode rice Mago Nashi protein homologs. In addition, we present the tissue-specific expression pattern of mago nashi at the level of RNA and protein. The rice Mago Nashi protein shares at least 73% amino acid identity with all known animal homologs. Genomic DNA gel blot analysis indicates that two copies of the mago nashi gene exist in the rice genome, one of which has identical intron positions to those found in an Arabidopsis homolog. mago nashi is expressed in root, leaf and developing seed tissue as determined by RNA and protein gel blot analysis. Evidence from Drosophila, Caenorhabditis elegans and human studies of Mago Nashi suggests that a major function of this protein is its involvement in RNA localization. The highly conserved amino acid sequence of all Mago Nashi protein homologs across kingdoms suggests that the plant version of this protein may similarly be involved in RNA localization. |
doi_str_mv | 10.1139/gen-44-3-394 |
format | Article |
fullrecord | <record><control><sourceid>proquest_fao_a</sourceid><recordid>TN_cdi_proquest_journals_220540384</recordid><sourceformat>XML</sourceformat><sourcesystem>PC</sourcesystem><sourcerecordid>75305090</sourcerecordid><originalsourceid>FETCH-LOGICAL-f204t-b537d8cda9c2cd85e7bdf9ef7d9cdf3a7d95c2d0cf441973796a7a956f7857ea3</originalsourceid><addsrcrecordid>eNotj01LAzEURYMoWKs79wb30SQv00yWUrQKFRfa9fiaj5kp00lNpmL99Q7U1eHC4XIvIdeC3wkB5r72PVOKAQOjTshEqJIzAClOyYSXIJjUZnZOLnLecC44GDEhn6-x83bfYaK2wYR28Kn9xaGNPcXeUf-zSz7nY8TukNtMY6BIm7ZuugO1sc8-fXtHU2s93WIdaY-5aWkTt7GL9SU5C9hlf_XPKVk9PX7Mn9nybfEyf1iyILka2LoA7Urr0FhpXVl4vXbB-KCdsS4AjiysdNwGpYTRMD5BjaaYBV0W2iNMye2xd5fi197nodrEfRon50pKXigOpRqlm6MUMFZYpzZXq3fJBXBppJZqBn9LD2FK</addsrcrecordid><sourcetype>Aggregation Database</sourcetype><iscdi>true</iscdi><recordtype>article</recordtype><pqid>220540384</pqid></control><display><type>article</type><title>Molecular characterization and expression analysis of a highly conserved rice mago nashi homolog</title><source>NRC Research Press</source><creator>Swidzinski, J.A ; Zaplachinski, S.T ; Chuong, S.D.X ; Wong, J.F.K ; Muench, D.G</creator><creatorcontrib>Swidzinski, J.A ; Zaplachinski, S.T ; Chuong, S.D.X ; Wong, J.F.K ; Muench, D.G</creatorcontrib><description>Mago Nashi, a protein initially shown to be essential in the development of the Drosophila oocyte, is highly conserved among species and shows no homology to any other known cellular proteins. Here we report the nucleotide sequence of a cDNA and a partial gene that encode rice Mago Nashi protein homologs. In addition, we present the tissue-specific expression pattern of mago nashi at the level of RNA and protein. The rice Mago Nashi protein shares at least 73% amino acid identity with all known animal homologs. Genomic DNA gel blot analysis indicates that two copies of the mago nashi gene exist in the rice genome, one of which has identical intron positions to those found in an Arabidopsis homolog. mago nashi is expressed in root, leaf and developing seed tissue as determined by RNA and protein gel blot analysis. Evidence from Drosophila, Caenorhabditis elegans and human studies of Mago Nashi suggests that a major function of this protein is its involvement in RNA localization. The highly conserved amino acid sequence of all Mago Nashi protein homologs across kingdoms suggests that the plant version of this protein may similarly be involved in RNA localization.</description><identifier>ISSN: 0831-2796</identifier><identifier>EISSN: 1480-3321</identifier><identifier>DOI: 10.1139/gen-44-3-394</identifier><identifier>CODEN: GENOE3</identifier><language>eng</language><publisher>Ottawa: Canadian Science Publishing NRC Research Press</publisher><subject>amino acid sequences ; Amino acids ; complementary DNA ; Deoxyribonucleic acid ; DNA ; Flowers & plants ; gene expression ; Genetics ; genomics ; introns ; leaves ; messenger RNA ; molecular sequence data ; nucleotide sequences ; Oryza sativa ; plant proteins ; Proteins ; R&D ; Research & development ; Rice ; roots ; seeds ; Yeasts</subject><ispartof>Genome, 2001-06, Vol.44 (3), p.394-400</ispartof><rights>Copyright National Research Council of Canada Jun 2001</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,777,781,27905,27906</link.rule.ids></links><search><creatorcontrib>Swidzinski, J.A</creatorcontrib><creatorcontrib>Zaplachinski, S.T</creatorcontrib><creatorcontrib>Chuong, S.D.X</creatorcontrib><creatorcontrib>Wong, J.F.K</creatorcontrib><creatorcontrib>Muench, D.G</creatorcontrib><title>Molecular characterization and expression analysis of a highly conserved rice mago nashi homolog</title><title>Genome</title><description>Mago Nashi, a protein initially shown to be essential in the development of the Drosophila oocyte, is highly conserved among species and shows no homology to any other known cellular proteins. Here we report the nucleotide sequence of a cDNA and a partial gene that encode rice Mago Nashi protein homologs. In addition, we present the tissue-specific expression pattern of mago nashi at the level of RNA and protein. The rice Mago Nashi protein shares at least 73% amino acid identity with all known animal homologs. Genomic DNA gel blot analysis indicates that two copies of the mago nashi gene exist in the rice genome, one of which has identical intron positions to those found in an Arabidopsis homolog. mago nashi is expressed in root, leaf and developing seed tissue as determined by RNA and protein gel blot analysis. Evidence from Drosophila, Caenorhabditis elegans and human studies of Mago Nashi suggests that a major function of this protein is its involvement in RNA localization. The highly conserved amino acid sequence of all Mago Nashi protein homologs across kingdoms suggests that the plant version of this protein may similarly be involved in RNA localization.</description><subject>amino acid sequences</subject><subject>Amino acids</subject><subject>complementary DNA</subject><subject>Deoxyribonucleic acid</subject><subject>DNA</subject><subject>Flowers & plants</subject><subject>gene expression</subject><subject>Genetics</subject><subject>genomics</subject><subject>introns</subject><subject>leaves</subject><subject>messenger RNA</subject><subject>molecular sequence data</subject><subject>nucleotide sequences</subject><subject>Oryza sativa</subject><subject>plant proteins</subject><subject>Proteins</subject><subject>R&D</subject><subject>Research & development</subject><subject>Rice</subject><subject>roots</subject><subject>seeds</subject><subject>Yeasts</subject><issn>0831-2796</issn><issn>1480-3321</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2001</creationdate><recordtype>article</recordtype><sourceid>8G5</sourceid><sourceid>ABUWG</sourceid><sourceid>AFKRA</sourceid><sourceid>AZQEC</sourceid><sourceid>BENPR</sourceid><sourceid>CCPQU</sourceid><sourceid>DWQXO</sourceid><sourceid>GNUQQ</sourceid><sourceid>GUQSH</sourceid><sourceid>M2O</sourceid><recordid>eNotj01LAzEURYMoWKs79wb30SQv00yWUrQKFRfa9fiaj5kp00lNpmL99Q7U1eHC4XIvIdeC3wkB5r72PVOKAQOjTshEqJIzAClOyYSXIJjUZnZOLnLecC44GDEhn6-x83bfYaK2wYR28Kn9xaGNPcXeUf-zSz7nY8TukNtMY6BIm7ZuugO1sc8-fXtHU2s93WIdaY-5aWkTt7GL9SU5C9hlf_XPKVk9PX7Mn9nybfEyf1iyILka2LoA7Urr0FhpXVl4vXbB-KCdsS4AjiysdNwGpYTRMD5BjaaYBV0W2iNMye2xd5fi197nodrEfRon50pKXigOpRqlm6MUMFZYpzZXq3fJBXBppJZqBn9LD2FK</recordid><startdate>20010601</startdate><enddate>20010601</enddate><creator>Swidzinski, J.A</creator><creator>Zaplachinski, S.T</creator><creator>Chuong, S.D.X</creator><creator>Wong, J.F.K</creator><creator>Muench, D.G</creator><general>Canadian Science Publishing NRC Research Press</general><scope>FBQ</scope><scope>3V.</scope><scope>7SS</scope><scope>7TK</scope><scope>7TM</scope><scope>7U9</scope><scope>7X2</scope><scope>7X7</scope><scope>7XB</scope><scope>88A</scope><scope>88E</scope><scope>88I</scope><scope>8AF</scope><scope>8AO</scope><scope>8FD</scope><scope>8FE</scope><scope>8FH</scope><scope>8FI</scope><scope>8FJ</scope><scope>8FK</scope><scope>8FQ</scope><scope>8FV</scope><scope>8G5</scope><scope>ABUWG</scope><scope>AEUYN</scope><scope>AFKRA</scope><scope>ATCPS</scope><scope>AZQEC</scope><scope>BBNVY</scope><scope>BENPR</scope><scope>BHPHI</scope><scope>CCPQU</scope><scope>DWQXO</scope><scope>FR3</scope><scope>FYUFA</scope><scope>GHDGH</scope><scope>GNUQQ</scope><scope>GUQSH</scope><scope>H94</scope><scope>HCIFZ</scope><scope>K9.</scope><scope>LK8</scope><scope>M0K</scope><scope>M0S</scope><scope>M1P</scope><scope>M2O</scope><scope>M2P</scope><scope>M3G</scope><scope>M7P</scope><scope>MBDVC</scope><scope>P64</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>Q9U</scope><scope>RC3</scope></search><sort><creationdate>20010601</creationdate><title>Molecular characterization and expression analysis of a highly conserved rice mago nashi homolog</title><author>Swidzinski, J.A ; Zaplachinski, S.T ; Chuong, S.D.X ; Wong, J.F.K ; Muench, D.G</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-f204t-b537d8cda9c2cd85e7bdf9ef7d9cdf3a7d95c2d0cf441973796a7a956f7857ea3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2001</creationdate><topic>amino acid sequences</topic><topic>Amino acids</topic><topic>complementary DNA</topic><topic>Deoxyribonucleic acid</topic><topic>DNA</topic><topic>Flowers & plants</topic><topic>gene expression</topic><topic>Genetics</topic><topic>genomics</topic><topic>introns</topic><topic>leaves</topic><topic>messenger RNA</topic><topic>molecular sequence data</topic><topic>nucleotide sequences</topic><topic>Oryza sativa</topic><topic>plant proteins</topic><topic>Proteins</topic><topic>R&D</topic><topic>Research & development</topic><topic>Rice</topic><topic>roots</topic><topic>seeds</topic><topic>Yeasts</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Swidzinski, J.A</creatorcontrib><creatorcontrib>Zaplachinski, S.T</creatorcontrib><creatorcontrib>Chuong, S.D.X</creatorcontrib><creatorcontrib>Wong, J.F.K</creatorcontrib><creatorcontrib>Muench, D.G</creatorcontrib><collection>AGRIS</collection><collection>ProQuest Central (Corporate)</collection><collection>Entomology Abstracts (Full archive)</collection><collection>Neurosciences Abstracts</collection><collection>Nucleic Acids Abstracts</collection><collection>Virology and AIDS Abstracts</collection><collection>Agricultural Science Collection</collection><collection>Health & Medical Collection</collection><collection>ProQuest Central (purchase pre-March 2016)</collection><collection>Biology Database (Alumni Edition)</collection><collection>Medical Database (Alumni Edition)</collection><collection>Science Database (Alumni Edition)</collection><collection>STEM Database</collection><collection>ProQuest Pharma Collection</collection><collection>Technology Research Database</collection><collection>ProQuest SciTech Collection</collection><collection>ProQuest Natural Science Collection</collection><collection>Hospital Premium Collection</collection><collection>Hospital Premium Collection (Alumni Edition)</collection><collection>ProQuest Central (Alumni) (purchase pre-March 2016)</collection><collection>Canadian Business & Current Affairs Database</collection><collection>Canadian Business & Current Affairs Database (Alumni Edition)</collection><collection>Research Library (Alumni Edition)</collection><collection>ProQuest Central (Alumni Edition)</collection><collection>ProQuest One Sustainability</collection><collection>ProQuest Central UK/Ireland</collection><collection>Agricultural & Environmental Science Collection</collection><collection>ProQuest Central Essentials</collection><collection>Biological Science Collection</collection><collection>ProQuest Central</collection><collection>Natural Science Collection</collection><collection>ProQuest One Community College</collection><collection>ProQuest Central Korea</collection><collection>Engineering Research Database</collection><collection>Health Research Premium Collection</collection><collection>Health Research Premium Collection (Alumni)</collection><collection>ProQuest Central Student</collection><collection>Research Library Prep</collection><collection>AIDS and Cancer Research Abstracts</collection><collection>SciTech Premium Collection</collection><collection>ProQuest Health & Medical Complete (Alumni)</collection><collection>ProQuest Biological Science Collection</collection><collection>Agricultural Science Database</collection><collection>Health & Medical Collection (Alumni Edition)</collection><collection>Medical Database</collection><collection>Research Library</collection><collection>Science Database</collection><collection>CBCA Reference & Current Events</collection><collection>Biological Science Database</collection><collection>Research Library (Corporate)</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>ProQuest One Academic Eastern Edition (DO NOT USE)</collection><collection>ProQuest One Academic</collection><collection>ProQuest One Academic UKI Edition</collection><collection>ProQuest Central Basic</collection><collection>Genetics Abstracts</collection><jtitle>Genome</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Swidzinski, J.A</au><au>Zaplachinski, S.T</au><au>Chuong, S.D.X</au><au>Wong, J.F.K</au><au>Muench, D.G</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Molecular characterization and expression analysis of a highly conserved rice mago nashi homolog</atitle><jtitle>Genome</jtitle><date>2001-06-01</date><risdate>2001</risdate><volume>44</volume><issue>3</issue><spage>394</spage><epage>400</epage><pages>394-400</pages><issn>0831-2796</issn><eissn>1480-3321</eissn><coden>GENOE3</coden><abstract>Mago Nashi, a protein initially shown to be essential in the development of the Drosophila oocyte, is highly conserved among species and shows no homology to any other known cellular proteins. Here we report the nucleotide sequence of a cDNA and a partial gene that encode rice Mago Nashi protein homologs. In addition, we present the tissue-specific expression pattern of mago nashi at the level of RNA and protein. The rice Mago Nashi protein shares at least 73% amino acid identity with all known animal homologs. Genomic DNA gel blot analysis indicates that two copies of the mago nashi gene exist in the rice genome, one of which has identical intron positions to those found in an Arabidopsis homolog. mago nashi is expressed in root, leaf and developing seed tissue as determined by RNA and protein gel blot analysis. Evidence from Drosophila, Caenorhabditis elegans and human studies of Mago Nashi suggests that a major function of this protein is its involvement in RNA localization. The highly conserved amino acid sequence of all Mago Nashi protein homologs across kingdoms suggests that the plant version of this protein may similarly be involved in RNA localization.</abstract><cop>Ottawa</cop><pub>Canadian Science Publishing NRC Research Press</pub><doi>10.1139/gen-44-3-394</doi><tpages>7</tpages></addata></record> |
fulltext | fulltext |
identifier | ISSN: 0831-2796 |
ispartof | Genome, 2001-06, Vol.44 (3), p.394-400 |
issn | 0831-2796 1480-3321 |
language | eng |
recordid | cdi_proquest_journals_220540384 |
source | NRC Research Press |
subjects | amino acid sequences Amino acids complementary DNA Deoxyribonucleic acid DNA Flowers & plants gene expression Genetics genomics introns leaves messenger RNA molecular sequence data nucleotide sequences Oryza sativa plant proteins Proteins R&D Research & development Rice roots seeds Yeasts |
title | Molecular characterization and expression analysis of a highly conserved rice mago nashi homolog |
url | https://sfx.bib-bvb.de/sfx_tum?ctx_ver=Z39.88-2004&ctx_enc=info:ofi/enc:UTF-8&ctx_tim=2025-01-19T13%3A09%3A38IST&url_ver=Z39.88-2004&url_ctx_fmt=infofi/fmt:kev:mtx:ctx&rfr_id=info:sid/primo.exlibrisgroup.com:primo3-Article-proquest_fao_a&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rft.genre=article&rft.atitle=Molecular%20characterization%20and%20expression%20analysis%20of%20a%20highly%20conserved%20rice%20mago%20nashi%20homolog&rft.jtitle=Genome&rft.au=Swidzinski,%20J.A&rft.date=2001-06-01&rft.volume=44&rft.issue=3&rft.spage=394&rft.epage=400&rft.pages=394-400&rft.issn=0831-2796&rft.eissn=1480-3321&rft.coden=GENOE3&rft_id=info:doi/10.1139/gen-44-3-394&rft_dat=%3Cproquest_fao_a%3E75305090%3C/proquest_fao_a%3E%3Curl%3E%3C/url%3E&disable_directlink=true&sfx.directlink=off&sfx.report_link=0&rft_id=info:oai/&rft_pqid=220540384&rft_id=info:pmid/&rfr_iscdi=true |